EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSECAG00000004924 (Gene tree)
Gene ID: 100059745
Gene Symbol: TSEN54
Alias: -
Full Name: tRNA splicing endonuclease subunit 54
Gene Type: protein_coding
Species: Equus_caballus
Status: putative
Strand: Minus strand
Length: 8516 bases
Position: chr11:6461968-6470483
Accession: 24575
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSECAP00000023740	tRNA_int_end_N2	PF12928.7	1.2e-18	1	1
ENSECAP00000003823	tRNA_int_end_N2	PF12928.7	5.8e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSECAT00000059850	-	2579	-	ENSECAP00000023740	530 (aa)	XP_023507791	UPI000C9DBBF1
ENSECAT00000005432	-	2085	-	ENSECAP00000003823	694 (aa)	-	F6ST55

Gene Model

Click here to download ENSECAG00000004924's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSECAG00000004924's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSECAG00000004924	TSEN54	100	83.992	ENSG00000182173	TSEN54	100	95.833	Homo_sapiens
ENSECAG00000004924	TSEN54	97	46.887	ENSAPOG00000009659	tsen54	99	44.522	Acanthochromis_polyacanthus
ENSECAG00000004924	TSEN54	99	86.069	ENSAMEG00000009414	TSEN54	99	86.641	Ailuropoda_melanoleuca
ENSECAG00000004924	TSEN54	97	46.394	ENSAOCG00000000152	tsen54	95	46.394	Amphiprion_ocellaris
ENSECAG00000004924	TSEN54	97	45.809	ENSAPEG00000018931	tsen54	94	45.809	Amphiprion_percula
ENSECAG00000004924	TSEN54	97	43.762	ENSATEG00000019860	tsen54	97	44.190	Anabas_testudineus
ENSECAG00000004924	TSEN54	86	52.402	ENSAPLG00000009419	TSEN54	100	52.402	Anas_platyrhynchos
ENSECAG00000004924	TSEN54	99	51.776	ENSACAG00000006714	TSEN54	99	51.859	Anolis_carolinensis
ENSECAG00000004924	TSEN54	99	85.115	ENSANAG00000024061	TSEN54	99	85.094	Aotus_nancymaae
ENSECAG00000004924	TSEN54	97	45.243	ENSACLG00000019800	tsen54	96	45.243	Astatotilapia_calliptera
ENSECAG00000004924	TSEN54	97	47.379	ENSAMXG00000006546	tsen54	96	47.379	Astyanax_mexicanus
ENSECAG00000004924	TSEN54	100	85.660	ENSBTAG00000000824	TSEN54	100	86.252	Bos_taurus
ENSECAG00000004924	TSEN54	99	84.351	ENSCJAG00000014278	TSEN54	99	84.340	Callithrix_jacchus
ENSECAG00000004924	TSEN54	100	88.512	ENSCAFG00000004798	TSEN54	100	88.889	Canis_familiaris
ENSECAG00000004924	TSEN54	100	88.512	ENSCAFG00020000312	TSEN54	100	88.889	Canis_lupus_dingo
ENSECAG00000004924	TSEN54	100	84.906	ENSCHIG00000019908	TSEN54	100	84.906	Capra_hircus
ENSECAG00000004924	TSEN54	86	82.826	ENSTSYG00000037439	TSEN54	100	83.478	Carlito_syrichta
ENSECAG00000004924	TSEN54	99	84.733	ENSCCAG00000036624	TSEN54	99	84.340	Cebus_capucinus
ENSECAG00000004924	TSEN54	97	84.913	ENSCATG00000042877	TSEN54	99	84.906	Cercocebus_atys
ENSECAG00000004924	TSEN54	97	83.915	ENSCLAG00000002924	TSEN54	99	83.743	Chinchilla_lanigera
ENSECAG00000004924	TSEN54	100	84.181	ENSCSAG00000004809	TSEN54	100	84.557	Chlorocebus_sabaeus
ENSECAG00000004924	TSEN54	99	55.805	ENSCPBG00000028071	TSEN54	99	55.805	Chrysemys_picta_bellii
ENSECAG00000004924	TSEN54	100	83.804	ENSCANG00000028053	TSEN54	100	83.804	Colobus_angolensis_palliatus
ENSECAG00000004924	TSEN54	100	80.000	ENSCGRG00001020029	Tsen54	100	80.000	Cricetulus_griseus_chok1gshd
ENSECAG00000004924	TSEN54	84	78.300	ENSCGRG00000016289	Tsen54	100	78.300	Cricetulus_griseus_crigri
ENSECAG00000004924	TSEN54	81	38.194	ENSCSEG00000020586	tsen54	99	38.194	Cynoglossus_semilaevis
ENSECAG00000004924	TSEN54	81	43.794	ENSDARG00000036844	tsen54	99	44.496	Danio_rerio
ENSECAG00000004924	TSEN54	100	83.239	ENSDNOG00000018452	TSEN54	100	83.804	Dasypus_novemcinctus
ENSECAG00000004924	TSEN54	100	81.509	ENSDORG00000004073	Tsen54	100	82.453	Dipodomys_ordii
ENSECAG00000004924	TSEN54	97	36.604	ENSEBUG00000005203	TSEN54	95	36.604	Eptatretus_burgeri
ENSECAG00000004924	TSEN54	100	99.057	ENSEASG00005000579	TSEN54	100	99.057	Equus_asinus_asinus
ENSECAG00000004924	TSEN54	86	82.495	ENSEEUG00000008467	TSEN54	100	82.932	Erinaceus_europaeus
ENSECAG00000004924	TSEN54	97	44.717	ENSELUG00000017703	tsen54	90	44.717	Esox_lucius
ENSECAG00000004924	TSEN54	100	87.571	ENSFCAG00000023712	TSEN54	100	88.136	Felis_catus
ENSECAG00000004924	TSEN54	97	51.946	ENSFALG00000001119	TSEN54	96	51.946	Ficedula_albicollis
ENSECAG00000004924	TSEN54	86	82.675	ENSFDAG00000019090	TSEN54	99	82.675	Fukomys_damarensis
ENSECAG00000004924	TSEN54	97	45.594	ENSFHEG00000005470	tsen54	96	45.785	Fundulus_heteroclitus
ENSECAG00000004924	TSEN54	80	45.405	ENSGMOG00000013146	tsen54	96	45.405	Gadus_morhua
ENSECAG00000004924	TSEN54	95	48.544	ENSGALG00000047163	TSEN54	98	48.544	Gallus_gallus
ENSECAG00000004924	TSEN54	99	46.476	ENSGAFG00000005111	tsen54	99	46.857	Gambusia_affinis
ENSECAG00000004924	TSEN54	96	43.931	ENSGACG00000014987	tsen54	99	44.828	Gasterosteus_aculeatus
ENSECAG00000004924	TSEN54	100	55.597	ENSGAGG00000006825	TSEN54	99	55.597	Gopherus_agassizii
ENSECAG00000004924	TSEN54	97	84.016	ENSGGOG00000009417	TSEN54	100	84.405	Gorilla_gorilla
ENSECAG00000004924	TSEN54	87	43.991	ENSHBUG00000018296	tsen54	99	38.710	Haplochromis_burtoni
ENSECAG00000004924	TSEN54	100	84.151	ENSHGLG00000007979	TSEN54	100	84.151	Heterocephalus_glaber_female
ENSECAG00000004924	TSEN54	100	83.208	ENSHGLG00100005497	TSEN54	100	83.208	Heterocephalus_glaber_male
ENSECAG00000004924	TSEN54	81	42.227	ENSHCOG00000007481	tsen54	99	42.227	Hippocampus_comes
ENSECAG00000004924	TSEN54	99	37.640	ENSIPUG00000000590	tsen54	98	37.640	Ictalurus_punctatus
ENSECAG00000004924	TSEN54	100	80.189	ENSSTOG00000012883	TSEN54	100	80.189	Ictidomys_tridecemlineatus
ENSECAG00000004924	TSEN54	100	82.895	ENSJJAG00000007365	Tsen54	100	82.895	Jaculus_jaculus
ENSECAG00000004924	TSEN54	97	45.028	ENSKMAG00000006944	tsen54	97	45.028	Kryptolebias_marmoratus
ENSECAG00000004924	TSEN54	97	44.123	ENSLBEG00000004199	tsen54	97	44.509	Labrus_bergylta
ENSECAG00000004924	TSEN54	97	46.927	ENSLACG00000009497	TSEN54	100	46.927	Latimeria_chalumnae
ENSECAG00000004924	TSEN54	98	48.417	ENSLOCG00000011191	tsen54	97	49.064	Lepisosteus_oculatus
ENSECAG00000004924	TSEN54	100	80.226	ENSLAFG00000011655	TSEN54	100	80.226	Loxodonta_africana
ENSECAG00000004924	TSEN54	100	84.369	ENSMFAG00000000712	TSEN54	100	84.746	Macaca_fascicularis
ENSECAG00000004924	TSEN54	100	84.181	ENSMNEG00000029199	TSEN54	100	84.557	Macaca_nemestrina
ENSECAG00000004924	TSEN54	86	83.370	ENSMLEG00000044168	TSEN54	88	83.807	Mandrillus_leucophaeus
ENSECAG00000004924	TSEN54	98	44.318	ENSMAMG00000019773	tsen54	98	44.068	Mastacembelus_armatus
ENSECAG00000004924	TSEN54	97	45.243	ENSMZEG00005000884	tsen54	96	45.243	Maylandia_zebra
ENSECAG00000004924	TSEN54	98	49.522	ENSMGAG00000009556	TSEN54	97	49.522	Meleagris_gallopavo
ENSECAG00000004924	TSEN54	100	80.755	ENSMAUG00000016838	Tsen54	100	80.755	Mesocricetus_auratus
ENSECAG00000004924	TSEN54	100	82.486	ENSMICG00000044012	TSEN54	100	82.863	Microcebus_murinus
ENSECAG00000004924	TSEN54	100	80.943	ENSMOCG00000021585	Tsen54	100	80.943	Microtus_ochrogaster
ENSECAG00000004924	TSEN54	72	63.399	ENSMMOG00000020189	tsen54	85	63.399	Mola_mola
ENSECAG00000004924	TSEN54	98	71.132	ENSMODG00000007438	TSEN54	98	71.004	Monodelphis_domestica
ENSECAG00000004924	TSEN54	97	45.351	ENSMALG00000020573	tsen54	97	45.351	Monopterus_albus
ENSECAG00000004924	TSEN54	100	78.302	MGP_CAROLIEiJ_G0017417	Tsen54	100	78.302	Mus_caroli
ENSECAG00000004924	TSEN54	100	79.434	ENSMUSG00000020781	Tsen54	100	79.434	Mus_musculus
ENSECAG00000004924	TSEN54	100	78.679	MGP_PahariEiJ_G0018547	Tsen54	100	78.679	Mus_pahari
ENSECAG00000004924	TSEN54	100	79.434	MGP_SPRETEiJ_G0018262	Tsen54	100	79.434	Mus_spretus
ENSECAG00000004924	TSEN54	100	86.817	ENSMPUG00000013870	TSEN54	100	87.194	Mustela_putorius_furo
ENSECAG00000004924	TSEN54	100	83.051	ENSMLUG00000015298	TSEN54	100	83.616	Myotis_lucifugus
ENSECAG00000004924	TSEN54	100	81.321	ENSNGAG00000015673	Tsen54	100	81.321	Nannospalax_galili
ENSECAG00000004924	TSEN54	89	66.102	ENSMEUG00000011908	TSEN54	100	66.102	Notamacropus_eugenii
ENSECAG00000004924	TSEN54	100	74.812	ENSOPRG00000012513	TSEN54	100	74.812	Ochotona_princeps
ENSECAG00000004924	TSEN54	97	45.946	ENSONIG00000009543	tsen54	96	45.946	Oreochromis_niloticus
ENSECAG00000004924	TSEN54	99	74.535	ENSOCUG00000009875	TSEN54	99	75.465	Oryctolagus_cuniculus
ENSECAG00000004924	TSEN54	98	45.802	ENSORLG00000000852	tsen54	98	45.802	Oryzias_latipes
ENSECAG00000004924	TSEN54	98	45.298	ENSORLG00020018221	tsen54	98	45.992	Oryzias_latipes_hni
ENSECAG00000004924	TSEN54	98	45.106	ENSORLG00015009413	tsen54	99	45.298	Oryzias_latipes_hsok
ENSECAG00000004924	TSEN54	98	45.594	ENSOMEG00000014402	tsen54	96	45.594	Oryzias_melastigma
ENSECAG00000004924	TSEN54	100	79.284	ENSOGAG00000001442	TSEN54	100	79.284	Otolemur_garnettii
ENSECAG00000004924	TSEN54	86	84.211	ENSOARG00000010361	TSEN54	100	84.902	Ovis_aries
ENSECAG00000004924	TSEN54	95	83.034	ENSPPAG00000043519	TSEN54	100	83.034	Pan_paniscus
ENSECAG00000004924	TSEN54	100	87.947	ENSPPRG00000009162	TSEN54	100	88.512	Panthera_pardus
ENSECAG00000004924	TSEN54	86	85.777	ENSPTIG00000019312	TSEN54	96	86.433	Panthera_tigris_altaica
ENSECAG00000004924	TSEN54	100	83.804	ENSPTRG00000009646	TSEN54	100	84.181	Pan_troglodytes
ENSECAG00000004924	TSEN54	99	84.601	ENSPANG00000020133	TSEN54	99	84.981	Papio_anubis
ENSECAG00000004924	TSEN54	97	46.583	ENSPKIG00000023018	tsen54	100	46.606	Paramormyrops_kingsleyae
ENSECAG00000004924	TSEN54	80	52.184	ENSPSIG00000012807	TSEN54	99	52.184	Pelodiscus_sinensis
ENSECAG00000004924	TSEN54	92	36.145	ENSPMGG00000019578	tsen54	99	36.145	Periophthalmus_magnuspinnatus
ENSECAG00000004924	TSEN54	100	80.755	ENSPEMG00000014857	Tsen54	100	80.755	Peromyscus_maniculatus_bairdii
ENSECAG00000004924	TSEN54	99	46.992	ENSPFOG00000022740	tsen54	99	47.368	Poecilia_formosa
ENSECAG00000004924	TSEN54	99	46.881	ENSPLAG00000014847	tsen54	99	47.259	Poecilia_latipinna
ENSECAG00000004924	TSEN54	99	46.692	ENSPMEG00000022876	tsen54	99	47.070	Poecilia_mexicana
ENSECAG00000004924	TSEN54	98	46.768	ENSPREG00000013090	tsen54	98	47.148	Poecilia_reticulata
ENSECAG00000004924	TSEN54	91	76.812	ENSPPYG00000008629	TSEN54	100	78.054	Pongo_abelii
ENSECAG00000004924	TSEN54	95	72.134	ENSPCAG00000002093	TSEN54	99	72.134	Procavia_capensis
ENSECAG00000004924	TSEN54	100	85.687	ENSPCOG00000027880	TSEN54	100	86.441	Propithecus_coquereli
ENSECAG00000004924	TSEN54	100	88.136	ENSPVAG00000008446	TSEN54	100	88.136	Pteropus_vampyrus
ENSECAG00000004924	TSEN54	92	44.689	ENSPNYG00000010217	tsen54	99	44.689	Pundamilia_nyererei
ENSECAG00000004924	TSEN54	98	45.741	ENSPNAG00000003770	tsen54	98	45.709	Pygocentrus_nattereri
ENSECAG00000004924	TSEN54	100	79.623	ENSRNOG00000004598	Tsen54	100	79.623	Rattus_norvegicus
ENSECAG00000004924	TSEN54	100	84.181	ENSRBIG00000043040	TSEN54	100	84.181	Rhinopithecus_bieti
ENSECAG00000004924	TSEN54	100	83.804	ENSRROG00000030797	TSEN54	100	83.804	Rhinopithecus_roxellana
ENSECAG00000004924	TSEN54	99	80.943	ENSSBOG00000013543	TSEN54	99	81.321	Saimiri_boliviensis_boliviensis
ENSECAG00000004924	TSEN54	99	68.598	ENSSHAG00000018127	TSEN54	98	68.598	Sarcophilus_harrisii
ENSECAG00000004924	TSEN54	81	44.124	ENSSFOG00015004093	tsen54	100	44.444	Scleropages_formosus
ENSECAG00000004924	TSEN54	97	46.198	ENSSDUG00000021506	tsen54	97	46.198	Seriola_dumerili
ENSECAG00000004924	TSEN54	97	45.817	ENSSLDG00000016303	tsen54	97	45.817	Seriola_lalandi_dorsalis
ENSECAG00000004924	TSEN54	79	53.428	ENSSPUG00000008988	TSEN54	97	53.147	Sphenodon_punctatus
ENSECAG00000004924	TSEN54	92	45.418	ENSSPAG00000008098	-	99	45.418	Stegastes_partitus
ENSECAG00000004924	TSEN54	81	41.589	ENSSPAG00000008047	tsen54	99	41.589	Stegastes_partitus
ENSECAG00000004924	TSEN54	100	89.077	ENSSSCG00000036852	TSEN54	100	90.019	Sus_scrofa
ENSECAG00000004924	TSEN54	86	52.632	ENSTGUG00000008548	TSEN54	100	52.632	Taeniopygia_guttata
ENSECAG00000004924	TSEN54	97	43.945	ENSTRUG00000004230	tsen54	87	60.847	Takifugu_rubripes
ENSECAG00000004924	TSEN54	98	43.511	ENSTNIG00000011281	tsen54	99	44.318	Tetraodon_nigroviridis
ENSECAG00000004924	TSEN54	86	89.301	ENSTTRG00000015828	TSEN54	100	89.738	Tursiops_truncatus
ENSECAG00000004924	TSEN54	81	85.814	ENSUAMG00000010045	TSEN54	100	85.814	Ursus_americanus
ENSECAG00000004924	TSEN54	84	85.843	ENSUMAG00000008979	TSEN54	100	86.292	Ursus_maritimus
ENSECAG00000004924	TSEN54	97	88.109	ENSVVUG00000011411	TSEN54	98	88.350	Vulpes_vulpes
ENSECAG00000004924	TSEN54	98	49.618	ENSXETG00000012532	tsen54	99	71.667	Xenopus_tropicalis
ENSECAG00000004924	TSEN54	97	38.241	ENSXCOG00000018245	tsen54	99	43.908	Xiphophorus_couchianus
ENSECAG00000004924	TSEN54	97	48.084	ENSXMAG00000018818	tsen54	96	48.276	Xiphophorus_maculatus