EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSECAG00000005071 (Gene tree)
Gene ID: 100069271
Gene Symbol: LSM10
Alias: -
Full Name: LSM10%2C U7 small nuclear RNA associated
Gene Type: protein_coding
Species: Equus_caballus
Status: putative
Strand: Plus strand
Length: 372 bases
Position: chr2:21117969-21118340
Accession: 19816
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSECAP00000003464	LSM	PF01423.22	2.4e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSECAT00000004958	-	372	-	ENSECAP00000003464	123 (aa)	XP_001499097	F6RB14

Gene Model

Click here to download ENSECAG00000005071's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSECAG00000005071's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSECAG00000005071	LSM10	55	30.000	ENSECAG00000018791	LSM2	59	30.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSECAG00000005071	LSM10	100	91.870	ENSG00000181817	LSM10	100	91.870	Homo_sapiens
ENSECAG00000005071	LSM10	100	95.935	ENSAMEG00000019854	LSM10	100	95.935	Ailuropoda_melanoleuca
ENSECAG00000005071	LSM10	94	68.103	ENSACIG00000015420	oscp1a	77	68.103	Amphilophus_citrinellus
ENSECAG00000005071	LSM10	96	68.644	ENSAOCG00000015618	LSM10	98	68.644	Amphiprion_ocellaris
ENSECAG00000005071	LSM10	90	66.667	ENSAOCG00000015607	LSM10	86	66.667	Amphiprion_ocellaris
ENSECAG00000005071	LSM10	96	68.644	ENSAOCG00000014654	-	98	68.644	Amphiprion_ocellaris
ENSECAG00000005071	LSM10	90	66.667	ENSAPEG00000021851	LSM10	86	66.667	Amphiprion_percula
ENSECAG00000005071	LSM10	96	68.644	ENSAPEG00000021845	-	98	68.644	Amphiprion_percula
ENSECAG00000005071	LSM10	94	62.069	ENSATEG00000006310	oscp1a	86	62.069	Anabas_testudineus
ENSECAG00000005071	LSM10	100	68.293	ENSACAG00000001231	LSM10	100	68.293	Anolis_carolinensis
ENSECAG00000005071	LSM10	100	92.683	ENSANAG00000018759	-	100	92.683	Aotus_nancymaae
ENSECAG00000005071	LSM10	98	92.500	ENSANAG00000031489	-	98	92.500	Aotus_nancymaae
ENSECAG00000005071	LSM10	96	66.949	ENSACLG00000004728	oscp1a	96	66.949	Astatotilapia_calliptera
ENSECAG00000005071	LSM10	96	68.644	ENSAMXG00000025301	oscp1a	98	68.644	Astyanax_mexicanus
ENSECAG00000005071	LSM10	98	94.167	ENSBTAG00000024096	LSM10	98	94.167	Bos_taurus
ENSECAG00000005071	LSM10	100	91.870	ENSCJAG00000044880	LSM10	100	91.870	Callithrix_jacchus
ENSECAG00000005071	LSM10	100	99.187	ENSCAFG00000003382	LSM10	100	99.187	Canis_familiaris
ENSECAG00000005071	LSM10	100	99.187	ENSCAFG00020008920	LSM10	100	99.187	Canis_lupus_dingo
ENSECAG00000005071	LSM10	98	94.167	ENSCHIG00000009398	LSM10	98	94.167	Capra_hircus
ENSECAG00000005071	LSM10	100	92.683	ENSCAPG00000012567	LSM10	100	92.683	Cavia_aperea
ENSECAG00000005071	LSM10	100	92.683	ENSCPOG00000039302	LSM10	100	92.683	Cavia_porcellus
ENSECAG00000005071	LSM10	98	92.500	ENSCCAG00000008378	-	98	92.500	Cebus_capucinus
ENSECAG00000005071	LSM10	100	92.683	ENSCCAG00000018913	-	100	92.683	Cebus_capucinus
ENSECAG00000005071	LSM10	100	92.683	ENSCATG00000006589	LSM10	100	92.683	Cercocebus_atys
ENSECAG00000005071	LSM10	100	95.122	ENSCLAG00000008633	LSM10	100	95.122	Chinchilla_lanigera
ENSECAG00000005071	LSM10	100	92.683	ENSCSAG00000000134	LSM10	100	92.683	Chlorocebus_sabaeus
ENSECAG00000005071	LSM10	100	92.000	ENSCHOG00000008615	LSM10	100	92.000	Choloepus_hoffmanni
ENSECAG00000005071	LSM10	83	31.373	ENSCSAVG00000001896	-	87	31.373	Ciona_savignyi
ENSECAG00000005071	LSM10	100	92.683	ENSCANG00000019928	LSM10	100	92.683	Colobus_angolensis_palliatus
ENSECAG00000005071	LSM10	98	95.868	ENSCGRG00001004317	-	99	95.868	Cricetulus_griseus_chok1gshd
ENSECAG00000005071	LSM10	93	86.325	ENSCGRG00001022673	-	94	86.325	Cricetulus_griseus_chok1gshd
ENSECAG00000005071	LSM10	93	86.325	ENSCGRG00000015514	-	94	86.325	Cricetulus_griseus_crigri
ENSECAG00000005071	LSM10	98	95.868	ENSCGRG00000014935	-	99	95.868	Cricetulus_griseus_crigri
ENSECAG00000005071	LSM10	96	63.559	ENSCSEG00000010374	oscp1a	79	63.559	Cynoglossus_semilaevis
ENSECAG00000005071	LSM10	97	65.546	ENSCVAG00000001536	oscp1a	90	65.546	Cyprinodon_variegatus
ENSECAG00000005071	LSM10	69	72.941	ENSDARG00000109563	CABZ01074453.1	99	72.941	Danio_rerio
ENSECAG00000005071	LSM10	98	72.727	ENSDARG00000101222	oscp1a	100	72.727	Danio_rerio
ENSECAG00000005071	LSM10	99	96.721	ENSDNOG00000036662	LSM10	99	96.721	Dasypus_novemcinctus
ENSECAG00000005071	LSM10	100	94.309	ENSDORG00000007579	Lsm10	100	94.309	Dipodomys_ordii
ENSECAG00000005071	LSM10	94	30.508	FBgn0033554	Lsm10	82	30.508	Drosophila_melanogaster
ENSECAG00000005071	LSM10	100	92.683	ENSETEG00000005703	LSM10	100	92.683	Echinops_telfairi
ENSECAG00000005071	LSM10	95	52.137	ENSEBUG00000001312	oscp1a	96	52.137	Eptatretus_burgeri
ENSECAG00000005071	LSM10	100	99.187	ENSEASG00005012194	LSM10	100	99.187	Equus_asinus_asinus
ENSECAG00000005071	LSM10	100	95.122	ENSEEUG00000012032	LSM10	100	95.122	Erinaceus_europaeus
ENSECAG00000005071	LSM10	98	68.595	ENSELUG00000007452	oscp1a	99	68.595	Esox_lucius
ENSECAG00000005071	LSM10	100	71.545	ENSFALG00000000851	LSM10	100	71.545	Ficedula_albicollis
ENSECAG00000005071	LSM10	100	91.870	ENSFDAG00000021056	LSM10	100	91.870	Fukomys_damarensis
ENSECAG00000005071	LSM10	89	67.273	ENSFHEG00000001058	oscp1a	95	67.273	Fundulus_heteroclitus
ENSECAG00000005071	LSM10	87	66.355	ENSGMOG00000019832	oscp1a	90	66.355	Gadus_morhua
ENSECAG00000005071	LSM10	100	74.797	ENSGALG00000002127	LSM10	100	74.797	Gallus_gallus
ENSECAG00000005071	LSM10	91	60.870	ENSGAFG00000016445	oscp1a	93	60.870	Gambusia_affinis
ENSECAG00000005071	LSM10	96	64.407	ENSGACG00000002329	oscp1a	97	64.407	Gasterosteus_aculeatus
ENSECAG00000005071	LSM10	100	73.171	ENSGAGG00000024848	LSM10	100	73.171	Gopherus_agassizii
ENSECAG00000005071	LSM10	100	93.496	ENSGGOG00000003556	LSM10	100	93.496	Gorilla_gorilla
ENSECAG00000005071	LSM10	96	66.949	ENSHBUG00000001722	oscp1a	96	66.949	Haplochromis_burtoni
ENSECAG00000005071	LSM10	100	92.683	ENSHGLG00000011625	LSM10	100	92.683	Heterocephalus_glaber_female
ENSECAG00000005071	LSM10	100	92.683	ENSHGLG00100001769	LSM10	100	92.683	Heterocephalus_glaber_male
ENSECAG00000005071	LSM10	85	69.524	ENSIPUG00000005808	oscp1a	91	69.524	Ictalurus_punctatus
ENSECAG00000005071	LSM10	100	95.935	ENSSTOG00000000606	LSM10	100	95.935	Ictidomys_tridecemlineatus
ENSECAG00000005071	LSM10	98	65.289	ENSKMAG00000012143	oscp1a	99	65.289	Kryptolebias_marmoratus
ENSECAG00000005071	LSM10	98	63.333	ENSLBEG00000017764	oscp1a	98	63.333	Labrus_bergylta
ENSECAG00000005071	LSM10	100	75.610	ENSLACG00000015904	LSM10	95	75.610	Latimeria_chalumnae
ENSECAG00000005071	LSM10	98	71.667	ENSLOCG00000018277	oscp1a	98	71.667	Lepisosteus_oculatus
ENSECAG00000005071	LSM10	100	95.122	ENSLAFG00000009600	LSM10	100	95.122	Loxodonta_africana
ENSECAG00000005071	LSM10	100	92.683	ENSMFAG00000009115	LSM10	100	92.683	Macaca_fascicularis
ENSECAG00000005071	LSM10	100	92.683	ENSMMUG00000017338	LSM10	100	92.683	Macaca_mulatta
ENSECAG00000005071	LSM10	100	92.683	ENSMNEG00000020023	LSM10	100	92.683	Macaca_nemestrina
ENSECAG00000005071	LSM10	100	92.683	ENSMLEG00000025150	LSM10	100	92.683	Mandrillus_leucophaeus
ENSECAG00000005071	LSM10	98	65.000	ENSMAMG00000004427	oscp1a	98	65.000	Mastacembelus_armatus
ENSECAG00000005071	LSM10	96	66.949	ENSMZEG00005026307	oscp1a	96	66.949	Maylandia_zebra
ENSECAG00000005071	LSM10	100	73.984	ENSMGAG00000015707	LSM10	100	73.984	Meleagris_gallopavo
ENSECAG00000005071	LSM10	98	93.388	ENSMAUG00000016624	Lsm10	99	93.388	Mesocricetus_auratus
ENSECAG00000005071	LSM10	98	94.215	ENSMOCG00000021943	Lsm10	99	94.215	Microtus_ochrogaster
ENSECAG00000005071	LSM10	95	64.957	ENSMMOG00000013597	oscp1a	87	64.957	Mola_mola
ENSECAG00000005071	LSM10	100	85.366	ENSMODG00000023328	LSM10	100	85.366	Monodelphis_domestica
ENSECAG00000005071	LSM10	58	59.211	ENSMALG00000012661	oscp1a	60	59.211	Monopterus_albus
ENSECAG00000005071	LSM10	98	94.215	MGP_CAROLIEiJ_G0026467	Lsm10	100	94.624	Mus_caroli
ENSECAG00000005071	LSM10	98	95.041	ENSMUSG00000050188	Lsm10	100	95.699	Mus_musculus
ENSECAG00000005071	LSM10	98	95.041	MGP_PahariEiJ_G0028798	Lsm10	100	95.699	Mus_pahari
ENSECAG00000005071	LSM10	98	95.041	MGP_SPRETEiJ_G0027446	Lsm10	100	95.699	Mus_spretus
ENSECAG00000005071	LSM10	100	99.187	ENSMPUG00000018593	LSM10	100	99.187	Mustela_putorius_furo
ENSECAG00000005071	LSM10	100	91.057	ENSMLUG00000023895	LSM10	100	91.057	Myotis_lucifugus
ENSECAG00000005071	LSM10	100	95.122	ENSNGAG00000015011	Lsm10	100	95.122	Nannospalax_galili
ENSECAG00000005071	LSM10	96	67.797	ENSNBRG00000014306	oscp1a	96	67.797	Neolamprologus_brichardi
ENSECAG00000005071	LSM10	100	93.496	ENSNLEG00000033754	LSM10	100	93.496	Nomascus_leucogenys
ENSECAG00000005071	LSM10	100	85.366	ENSMEUG00000006313	LSM10	100	85.366	Notamacropus_eugenii
ENSECAG00000005071	LSM10	100	91.057	ENSOPRG00000001699	LSM10	100	91.057	Ochotona_princeps
ENSECAG00000005071	LSM10	100	95.122	ENSODEG00000019161	LSM10	100	95.122	Octodon_degus
ENSECAG00000005071	LSM10	96	67.797	ENSONIG00000020904	oscp1a	97	67.797	Oreochromis_niloticus
ENSECAG00000005071	LSM10	100	78.049	ENSOANG00000002066	LSM10	100	78.049	Ornithorhynchus_anatinus
ENSECAG00000005071	LSM10	100	90.244	ENSOCUG00000005333	LSM10	100	90.244	Oryctolagus_cuniculus
ENSECAG00000005071	LSM10	97	66.387	ENSORLG00000009504	oscp1a	98	66.387	Oryzias_latipes
ENSECAG00000005071	LSM10	97	66.387	ENSORLG00020016201	oscp1a	98	66.387	Oryzias_latipes_hni
ENSECAG00000005071	LSM10	97	66.387	ENSORLG00015007794	oscp1a	98	66.387	Oryzias_latipes_hsok
ENSECAG00000005071	LSM10	100	95.935	ENSOGAG00000002653	LSM10	100	95.935	Otolemur_garnettii
ENSECAG00000005071	LSM10	98	94.167	ENSOARG00000009596	LSM10	98	94.167	Ovis_aries
ENSECAG00000005071	LSM10	100	91.870	ENSPPAG00000023465	LSM10	100	91.870	Pan_paniscus
ENSECAG00000005071	LSM10	100	98.374	ENSPPRG00000014619	LSM10	100	98.374	Panthera_pardus
ENSECAG00000005071	LSM10	100	98.374	ENSPTIG00000004613	LSM10	100	98.374	Panthera_tigris_altaica
ENSECAG00000005071	LSM10	100	91.870	ENSPTRG00000000539	LSM10	100	91.870	Pan_troglodytes
ENSECAG00000005071	LSM10	100	92.683	ENSPANG00000023172	LSM10	100	92.683	Papio_anubis
ENSECAG00000005071	LSM10	98	65.833	ENSPKIG00000003728	oscp1a	97	65.833	Paramormyrops_kingsleyae
ENSECAG00000005071	LSM10	100	73.171	ENSPSIG00000000590	LSM10	100	73.171	Pelodiscus_sinensis
ENSECAG00000005071	LSM10	62	65.789	ENSPMGG00000015718	oscp1a	99	65.789	Periophthalmus_magnuspinnatus
ENSECAG00000005071	LSM10	84	86.408	ENSPCIG00000014865	LSM10	76	86.408	Phascolarctos_cinereus
ENSECAG00000005071	LSM10	91	67.857	ENSPFOG00000020490	oscp1a	95	67.857	Poecilia_formosa
ENSECAG00000005071	LSM10	91	67.857	ENSPLAG00000016537	oscp1a	85	67.857	Poecilia_latipinna
ENSECAG00000005071	LSM10	88	68.519	ENSPMEG00000000174	oscp1a	94	68.519	Poecilia_mexicana
ENSECAG00000005071	LSM10	91	66.964	ENSPREG00000009899	oscp1a	85	66.964	Poecilia_reticulata
ENSECAG00000005071	LSM10	100	92.683	ENSPPYG00000001539	LSM10	100	92.683	Pongo_abelii
ENSECAG00000005071	LSM10	100	91.870	ENSPCAG00000002520	LSM10	100	91.870	Procavia_capensis
ENSECAG00000005071	LSM10	100	94.309	ENSPVAG00000008644	LSM10	100	94.309	Pteropus_vampyrus
ENSECAG00000005071	LSM10	96	66.949	ENSPNYG00000003138	oscp1a	96	66.949	Pundamilia_nyererei
ENSECAG00000005071	LSM10	95	67.521	ENSPNAG00000028829	oscp1a	97	67.521	Pygocentrus_nattereri
ENSECAG00000005071	LSM10	98	95.868	ENSRNOG00000025716	Lsm10	99	95.868	Rattus_norvegicus
ENSECAG00000005071	LSM10	100	92.683	ENSRBIG00000001561	LSM10	100	92.683	Rhinopithecus_bieti
ENSECAG00000005071	LSM10	100	92.683	ENSRROG00000011414	LSM10	100	92.683	Rhinopithecus_roxellana
ENSECAG00000005071	LSM10	100	92.683	ENSSBOG00000036413	-	100	92.683	Saimiri_boliviensis_boliviensis
ENSECAG00000005071	LSM10	100	84.553	ENSSHAG00000018056	LSM10	100	84.553	Sarcophilus_harrisii
ENSECAG00000005071	LSM10	98	66.942	ENSSFOG00015019954	lsm10	99	66.942	Scleropages_formosus
ENSECAG00000005071	LSM10	93	66.087	ENSSMAG00000001297	oscp1a	98	66.087	Scophthalmus_maximus
ENSECAG00000005071	LSM10	98	64.463	ENSSDUG00000007090	oscp1a	98	64.463	Seriola_dumerili
ENSECAG00000005071	LSM10	94	65.517	ENSSLDG00000000800	oscp1a	96	65.517	Seriola_lalandi_dorsalis
ENSECAG00000005071	LSM10	100	95.200	ENSSARG00000004211	LSM10	100	95.200	Sorex_araneus
ENSECAG00000005071	LSM10	94	66.379	ENSSPAG00000009229	oscp1a	96	66.379	Stegastes_partitus
ENSECAG00000005071	LSM10	100	93.496	ENSSSCG00000038916	LSM10	100	93.496	Sus_scrofa
ENSECAG00000005071	LSM10	99	72.131	ENSTGUG00000001600	-	100	72.131	Taeniopygia_guttata
ENSECAG00000005071	LSM10	99	72.131	ENSTGUG00000001602	-	100	72.131	Taeniopygia_guttata
ENSECAG00000005071	LSM10	97	67.227	ENSTRUG00000010531	oscp1a	96	67.227	Takifugu_rubripes
ENSECAG00000005071	LSM10	100	93.496	ENSTBEG00000016674	LSM10	100	93.496	Tupaia_belangeri
ENSECAG00000005071	LSM10	100	96.748	ENSUAMG00000020265	LSM10	100	96.748	Ursus_americanus
ENSECAG00000005071	LSM10	100	96.748	ENSUMAG00000001438	LSM10	57	96.748	Ursus_maritimus
ENSECAG00000005071	LSM10	100	99.187	ENSVVUG00000023209	LSM10	100	99.187	Vulpes_vulpes
ENSECAG00000005071	LSM10	100	70.732	ENSXETG00000027631	lsm10	100	70.732	Xenopus_tropicalis
ENSECAG00000005071	LSM10	96	60.800	ENSXCOG00000018776	oscp1a	79	60.800	Xiphophorus_couchianus
ENSECAG00000005071	LSM10	95	62.500	ENSXMAG00000019963	oscp1a	96	62.500	Xiphophorus_maculatus