EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSECAG00000005540 (Gene tree)
Gene ID: 106782925
Gene Symbol: SCAF8
Alias: -
Full Name: SR-related CTD associated factor 8
Gene Type: protein_coding
Species: Equus_caballus
Status: putative
Strand: Minus strand
Length: 77231 bases
Position: chr31:12842564-12919794
Accession: 52434
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSECAP00000045437	RRM_1	PF00076.22	2.4e-09	1	1
ENSECAP00000004716	RRM_1	PF00076.22	2.4e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSECAT00000006620	-	3824	-	ENSECAP00000004716	1269 (aa)	-	F7ADE1
ENSECAT00000051636	-	3887	-	ENSECAP00000045437	1290 (aa)	-	-

Gene Model

Click here to download ENSECAG00000005540's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSECAG00000005540's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSECAG00000005540	SCAF8	100	96.827	ENSG00000213079	SCAF8	100	96.774	Homo_sapiens
ENSECAG00000005540	SCAF8	87	69.065	ENSAPOG00000015527	SCAF8	77	68.585	Acanthochromis_polyacanthus
ENSECAG00000005540	SCAF8	100	97.134	ENSAMEG00000007583	SCAF8	97	97.134	Ailuropoda_melanoleuca
ENSECAG00000005540	SCAF8	87	69.065	ENSAOCG00000002421	SCAF8	76	68.585	Amphiprion_ocellaris
ENSECAG00000005540	SCAF8	88	66.346	ENSATEG00000006959	SCAF8	97	65.584	Anabas_testudineus
ENSECAG00000005540	SCAF8	100	78.878	ENSAPLG00000005765	SCAF8	100	78.332	Anas_platyrhynchos
ENSECAG00000005540	SCAF8	99	74.607	ENSACAG00000005282	SCAF8	99	74.508	Anolis_carolinensis
ENSECAG00000005540	SCAF8	100	96.285	ENSANAG00000036184	SCAF8	100	96.223	Aotus_nancymaae
ENSECAG00000005540	SCAF8	87	68.825	ENSACLG00000018828	SCAF8	80	68.225	Astatotilapia_calliptera
ENSECAG00000005540	SCAF8	100	96.299	ENSBTAG00000031917	SCAF8	100	96.063	Bos_taurus
ENSECAG00000005540	SCAF8	100	96.130	ENSCJAG00000012631	SCAF8	97	96.130	Callithrix_jacchus
ENSECAG00000005540	SCAF8	99	96.991	ENSCAFG00000000570	SCAF8	100	97.080	Canis_familiaris
ENSECAG00000005540	SCAF8	99	96.989	ENSCAFG00020015048	SCAF8	99	96.919	Canis_lupus_dingo
ENSECAG00000005540	SCAF8	100	96.063	ENSCHIG00000025041	SCAF8	100	95.669	Capra_hircus
ENSECAG00000005540	SCAF8	99	95.554	ENSTSYG00000010991	SCAF8	98	95.554	Carlito_syrichta
ENSECAG00000005540	SCAF8	65	98.276	ENSCAPG00000003300	SCAF8	87	98.246	Cavia_aperea
ENSECAG00000005540	SCAF8	99	86.967	ENSCPOG00000022216	-	99	86.019	Cavia_porcellus
ENSECAG00000005540	SCAF8	100	95.975	ENSCCAG00000024952	SCAF8	100	95.975	Cebus_capucinus
ENSECAG00000005540	SCAF8	100	96.517	ENSCATG00000035361	SCAF8	100	96.459	Cercocebus_atys
ENSECAG00000005540	SCAF8	100	94.178	ENSCLAG00000004910	SCAF8	100	94.687	Chinchilla_lanigera
ENSECAG00000005540	SCAF8	100	96.672	ENSCSAG00000013430	SCAF8	100	96.672	Chlorocebus_sabaeus
ENSECAG00000005540	SCAF8	100	76.397	ENSCPBG00000016330	SCAF8	100	75.147	Chrysemys_picta_bellii
ENSECAG00000005540	SCAF8	100	96.362	ENSCANG00000039499	SCAF8	99	96.362	Colobus_angolensis_palliatus
ENSECAG00000005540	SCAF8	100	91.660	ENSCGRG00001020167	Scaf8	100	91.660	Cricetulus_griseus_chok1gshd
ENSECAG00000005540	SCAF8	99	91.521	ENSCGRG00000004120	Scaf8	99	91.594	Cricetulus_griseus_crigri
ENSECAG00000005540	SCAF8	87	66.386	ENSCSEG00000000043	-	78	67.470	Cynoglossus_semilaevis
ENSECAG00000005540	SCAF8	82	67.366	ENSCVAG00000000925	SCAF8	77	66.710	Cyprinodon_variegatus
ENSECAG00000005540	SCAF8	96	89.664	ENSDNOG00000025271	SCAF8	100	93.273	Dasypus_novemcinctus
ENSECAG00000005540	SCAF8	99	92.508	ENSDORG00000006391	Scaf8	100	92.587	Dipodomys_ordii
ENSECAG00000005540	SCAF8	100	99.922	ENSEASG00005018879	SCAF8	100	99.922	Equus_asinus_asinus
ENSECAG00000005540	SCAF8	88	66.042	ENSELUG00000002779	SCAF8	75	65.574	Esox_lucius
ENSECAG00000005540	SCAF8	100	97.244	ENSFCAG00000023424	SCAF8	100	97.244	Felis_catus
ENSECAG00000005540	SCAF8	100	78.972	ENSFALG00000012433	SCAF8	100	78.677	Ficedula_albicollis
ENSECAG00000005540	SCAF8	99	94.612	ENSFDAG00000010335	SCAF8	99	94.612	Fukomys_damarensis
ENSECAG00000005540	SCAF8	93	69.297	ENSFHEG00000008284	SCAF8	77	68.804	Fundulus_heteroclitus
ENSECAG00000005540	SCAF8	80	57.073	ENSGMOG00000018812	SCAF8	62	75.072	Gadus_morhua
ENSECAG00000005540	SCAF8	99	79.751	ENSGALG00000013635	SCAF8	99	78.816	Gallus_gallus
ENSECAG00000005540	SCAF8	86	68.966	ENSGAFG00000018033	SCAF8	78	65.602	Gambusia_affinis
ENSECAG00000005540	SCAF8	93	53.481	ENSGACG00000006909	SCAF8	100	53.344	Gasterosteus_aculeatus
ENSECAG00000005540	SCAF8	63	72.906	ENSGAGG00000017820	-	88	71.798	Gopherus_agassizii
ENSECAG00000005540	SCAF8	100	96.774	ENSGGOG00000008645	SCAF8	100	96.774	Gorilla_gorilla
ENSECAG00000005540	SCAF8	87	68.705	ENSHBUG00000019537	SCAF8	80	68.106	Haplochromis_burtoni
ENSECAG00000005540	SCAF8	100	94.418	ENSHGLG00000003619	SCAF8	100	94.418	Heterocephalus_glaber_female
ENSECAG00000005540	SCAF8	100	93.789	ENSHGLG00100004708	SCAF8	100	94.374	Heterocephalus_glaber_male
ENSECAG00000005540	SCAF8	99	95.728	ENSSTOG00000026043	SCAF8	100	95.820	Ictidomys_tridecemlineatus
ENSECAG00000005540	SCAF8	100	92.683	ENSJJAG00000020480	Scaf8	100	92.683	Jaculus_jaculus
ENSECAG00000005540	SCAF8	87	68.592	ENSKMAG00000012767	SCAF8	78	68.111	Kryptolebias_marmoratus
ENSECAG00000005540	SCAF8	62	76.667	ENSLBEG00000012484	-	59	76.786	Labrus_bergylta
ENSECAG00000005540	SCAF8	83	77.876	ENSLACG00000001394	SCAF8	99	62.785	Latimeria_chalumnae
ENSECAG00000005540	SCAF8	100	61.268	ENSLOCG00000016856	SCAF8	100	60.438	Lepisosteus_oculatus
ENSECAG00000005540	SCAF8	100	94.108	ENSLAFG00000000022	SCAF8	100	94.658	Loxodonta_africana
ENSECAG00000005540	SCAF8	100	96.672	ENSMFAG00000032738	SCAF8	100	96.617	Macaca_fascicularis
ENSECAG00000005540	SCAF8	100	96.672	ENSMMUG00000015163	SCAF8	100	96.617	Macaca_mulatta
ENSECAG00000005540	SCAF8	100	96.672	ENSMNEG00000043466	SCAF8	100	96.617	Macaca_nemestrina
ENSECAG00000005540	SCAF8	99	96.490	ENSMLEG00000034845	SCAF8	100	96.490	Mandrillus_leucophaeus
ENSECAG00000005540	SCAF8	83	65.987	ENSMAMG00000009457	SCAF8	76	64.968	Mastacembelus_armatus
ENSECAG00000005540	SCAF8	87	68.705	ENSMZEG00005005698	SCAF8	80	68.106	Maylandia_zebra
ENSECAG00000005540	SCAF8	99	79.782	ENSMGAG00000012762	SCAF8	100	79.005	Meleagris_gallopavo
ENSECAG00000005540	SCAF8	99	91.039	ENSMAUG00000009513	Scaf8	100	91.039	Mesocricetus_auratus
ENSECAG00000005540	SCAF8	100	95.824	ENSMICG00000028965	SCAF8	100	95.669	Microcebus_murinus
ENSECAG00000005540	SCAF8	100	92.604	ENSMOCG00000014950	Scaf8	100	92.604	Microtus_ochrogaster
ENSECAG00000005540	SCAF8	84	65.228	ENSMMOG00000002216	SCAF8	78	64.086	Mola_mola
ENSECAG00000005540	SCAF8	99	86.788	ENSMODG00000008301	SCAF8	100	86.909	Monodelphis_domestica
ENSECAG00000005540	SCAF8	87	67.986	ENSMALG00000011584	SCAF8	78	68.523	Monopterus_albus
ENSECAG00000005540	SCAF8	100	91.339	MGP_CAROLIEiJ_G0021016	Scaf8	100	91.339	Mus_caroli
ENSECAG00000005540	SCAF8	100	91.575	ENSMUSG00000046201	Scaf8	100	91.575	Mus_musculus
ENSECAG00000005540	SCAF8	100	91.890	MGP_PahariEiJ_G0023334	Scaf8	100	91.890	Mus_pahari
ENSECAG00000005540	SCAF8	100	96.824	ENSMPUG00000001974	SCAF8	100	96.824	Mustela_putorius_furo
ENSECAG00000005540	SCAF8	100	94.331	ENSMLUG00000029190	SCAF8	100	94.331	Myotis_lucifugus
ENSECAG00000005540	SCAF8	100	93.234	ENSNGAG00000012332	Scaf8	100	93.234	Nannospalax_galili
ENSECAG00000005540	SCAF8	96	63.435	ENSNBRG00000009067	SCAF8	100	63.318	Neolamprologus_brichardi
ENSECAG00000005540	SCAF8	100	95.447	ENSNLEG00000015509	SCAF8	99	95.126	Nomascus_leucogenys
ENSECAG00000005540	SCAF8	70	92.308	ENSOPRG00000018413	-	76	92.308	Ochotona_princeps
ENSECAG00000005540	SCAF8	100	94.423	ENSODEG00000007296	SCAF8	100	94.423	Octodon_degus
ENSECAG00000005540	SCAF8	100	55.350	ENSONIG00000008119	SCAF8	92	57.179	Oreochromis_niloticus
ENSECAG00000005540	SCAF8	99	96.123	ENSOCUG00000026063	SCAF8	100	96.215	Oryctolagus_cuniculus
ENSECAG00000005540	SCAF8	86	69.127	ENSORLG00000017358	SCAF8	78	69.004	Oryzias_latipes
ENSECAG00000005540	SCAF8	86	69.174	ENSORLG00020002214	SCAF8	78	69.127	Oryzias_latipes_hni
ENSECAG00000005540	SCAF8	86	69.373	ENSORLG00015015779	SCAF8	78	69.250	Oryzias_latipes_hsok
ENSECAG00000005540	SCAF8	86	69.250	ENSOMEG00000015471	SCAF8	77	69.127	Oryzias_melastigma
ENSECAG00000005540	SCAF8	100	96.130	ENSOGAG00000034223	SCAF8	97	96.130	Otolemur_garnettii
ENSECAG00000005540	SCAF8	99	95.876	ENSOARG00000004159	SCAF8	100	95.480	Ovis_aries
ENSECAG00000005540	SCAF8	100	96.617	ENSPPAG00000039826	SCAF8	100	96.617	Pan_paniscus
ENSECAG00000005540	SCAF8	100	97.244	ENSPPRG00000023175	SCAF8	100	97.244	Panthera_pardus
ENSECAG00000005540	SCAF8	99	97.147	ENSPTIG00000014836	SCAF8	100	97.147	Panthera_tigris_altaica
ENSECAG00000005540	SCAF8	100	96.672	ENSPTRG00000018727	SCAF8	100	96.617	Pan_troglodytes
ENSECAG00000005540	SCAF8	100	96.517	ENSPANG00000017489	SCAF8	100	94.791	Papio_anubis
ENSECAG00000005540	SCAF8	100	57.100	ENSPKIG00000021212	SCAF8	100	71.220	Paramormyrops_kingsleyae
ENSECAG00000005540	SCAF8	89	70.529	ENSPSIG00000008614	SCAF8	95	77.608	Pelodiscus_sinensis
ENSECAG00000005540	SCAF8	99	91.832	ENSPEMG00000010531	Scaf8	100	91.832	Peromyscus_maniculatus_bairdii
ENSECAG00000005540	SCAF8	100	87.579	ENSPCIG00000001141	SCAF8	100	87.579	Phascolarctos_cinereus
ENSECAG00000005540	SCAF8	86	69.667	ENSPFOG00000004176	SCAF8	92	69.975	Poecilia_formosa
ENSECAG00000005540	SCAF8	86	69.544	ENSPLAG00000021432	SCAF8	77	68.927	Poecilia_latipinna
ENSECAG00000005540	SCAF8	86	69.790	ENSPMEG00000007591	SCAF8	84	68.645	Poecilia_mexicana
ENSECAG00000005540	SCAF8	86	69.420	ENSPREG00000000652	SCAF8	77	68.804	Poecilia_reticulata
ENSECAG00000005540	SCAF8	100	95.208	ENSPPYG00000017121	SCAF8	100	94.894	Pongo_abelii
ENSECAG00000005540	SCAF8	85	97.487	ENSPCAG00000013044	SCAF8	90	97.487	Procavia_capensis
ENSECAG00000005540	SCAF8	100	96.210	ENSPCOG00000002067	SCAF8	99	95.959	Propithecus_coquereli
ENSECAG00000005540	SCAF8	99	92.886	ENSPVAG00000005582	SCAF8	99	93.952	Pteropus_vampyrus
ENSECAG00000005540	SCAF8	87	68.825	ENSPNYG00000007277	SCAF8	80	68.225	Pundamilia_nyererei
ENSECAG00000005540	SCAF8	86	68.382	ENSPNAG00000024740	SCAF8	82	68.627	Pygocentrus_nattereri
ENSECAG00000005540	SCAF8	100	91.417	ENSRNOG00000016919	Scaf8	100	91.417	Rattus_norvegicus
ENSECAG00000005540	SCAF8	100	96.381	ENSRBIG00000035769	SCAF8	100	96.381	Rhinopithecus_bieti
ENSECAG00000005540	SCAF8	100	96.459	ENSRROG00000013580	SCAF8	100	96.459	Rhinopithecus_roxellana
ENSECAG00000005540	SCAF8	100	95.987	ENSSBOG00000027023	SCAF8	100	95.987	Saimiri_boliviensis_boliviensis
ENSECAG00000005540	SCAF8	100	86.881	ENSSHAG00000009915	SCAF8	100	86.881	Sarcophilus_harrisii
ENSECAG00000005540	SCAF8	100	54.950	ENSSFOG00015009481	SCAF8	86	70.263	Scleropages_formosus
ENSECAG00000005540	SCAF8	87	68.144	ENSSMAG00000008275	SCAF8	77	67.425	Scophthalmus_maximus
ENSECAG00000005540	SCAF8	100	77.434	ENSSPUG00000015219	SCAF8	100	77.341	Sphenodon_punctatus
ENSECAG00000005540	SCAF8	100	97.244	ENSSSCG00000004070	SCAF8	100	97.244	Sus_scrofa
ENSECAG00000005540	SCAF8	99	80.110	ENSTGUG00000011151	SCAF8	100	79.796	Taeniopygia_guttata
ENSECAG00000005540	SCAF8	86	68.025	ENSTRUG00000009243	SCAF8	78	67.778	Takifugu_rubripes
ENSECAG00000005540	SCAF8	82	69.492	ENSTNIG00000016885	SCAF8	95	69.492	Tetraodon_nigroviridis
ENSECAG00000005540	SCAF8	99	96.667	ENSTTRG00000014538	SCAF8	100	96.667	Tursiops_truncatus
ENSECAG00000005540	SCAF8	100	96.929	ENSUAMG00000024736	SCAF8	99	96.905	Ursus_americanus
ENSECAG00000005540	SCAF8	98	96.948	ENSUMAG00000013404	SCAF8	100	96.948	Ursus_maritimus
ENSECAG00000005540	SCAF8	67	86.047	ENSVPAG00000012465	SCAF8	99	85.598	Vicugna_pacos
ENSECAG00000005540	SCAF8	99	97.068	ENSVVUG00000007532	SCAF8	100	97.156	Vulpes_vulpes
ENSECAG00000005540	SCAF8	100	61.550	ENSXETG00000013132	scaf8	100	61.383	Xenopus_tropicalis
ENSECAG00000005540	SCAF8	86	69.544	ENSXMAG00000019192	SCAF8	78	68.927	Xiphophorus_maculatus