EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSECAG00000005933 (Gene tree)
Gene ID: 100146306
Gene Symbol: PRDM12
Alias: PFM9
Full Name: PR/SET domain 12
Gene Type: protein_coding
Species: Equus_caballus
Status: putative
Strand: Plus strand
Length: 13185 bases
Position: chr25:34014451-34027635
Accession: 100146306
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSECAP00000004143	zf-C2H2	PF00096.26	1.3e-12	1	2
ENSECAP00000004143	zf-C2H2	PF00096.26	1.3e-12	2	2
ENSECAP00000004143	zf-met	PF12874.7	1.2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSECAT00000005888	PRDM12-201	1089	XM_023629583	ENSECAP00000004143	362 (aa)	XP_023485351	F7AAS9

Gene Model

Click here to download ENSECAG00000005933's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSECAG00000005933's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSECAG00000005933	PRDM12	68	39.394	ENSECAG00000011516	PRDM5	88	39.394

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSECAG00000005933	PRDM12	100	97.548	ENSG00000130711	PRDM12	100	97.548	Homo_sapiens
ENSECAG00000005933	PRDM12	99	63.934	ENSAPOG00000018234	-	97	65.634	Acanthochromis_polyacanthus
ENSECAG00000005933	PRDM12	99	75.000	ENSAPOG00000016051	prdm12b	94	78.056	Acanthochromis_polyacanthus
ENSECAG00000005933	PRDM12	89	95.046	ENSAMEG00000016234	PRDM12	99	95.046	Ailuropoda_melanoleuca
ENSECAG00000005933	PRDM12	99	75.000	ENSACIG00000019578	prdm12b	94	78.873	Amphilophus_citrinellus
ENSECAG00000005933	PRDM12	99	75.648	ENSACIG00000005193	-	96	77.961	Amphilophus_citrinellus
ENSECAG00000005933	PRDM12	99	76.316	ENSAOCG00000015040	prdm12b	94	79.494	Amphiprion_ocellaris
ENSECAG00000005933	PRDM12	100	71.875	ENSAPEG00000022849	-	88	78.529	Amphiprion_percula
ENSECAG00000005933	PRDM12	99	76.923	ENSAPEG00000015092	prdm12b	94	80.170	Amphiprion_percula
ENSECAG00000005933	PRDM12	93	80.994	ENSATEG00000014595	-	99	80.994	Anabas_testudineus
ENSECAG00000005933	PRDM12	94	98.824	ENSANAG00000020616	PRDM12	100	98.824	Aotus_nancymaae
ENSECAG00000005933	PRDM12	99	77.929	ENSACLG00000011876	prdm12b	94	80.994	Astatotilapia_calliptera
ENSECAG00000005933	PRDM12	99	73.858	ENSACLG00000007631	-	89	80.229	Astatotilapia_calliptera
ENSECAG00000005933	PRDM12	99	78.261	ENSAMXG00000008540	PRDM12	93	83.284	Astyanax_mexicanus
ENSECAG00000005933	PRDM12	99	82.432	ENSAMXG00000033665	prdm12b	94	86.533	Astyanax_mexicanus
ENSECAG00000005933	PRDM12	100	98.895	ENSBTAG00000023797	PRDM12	100	98.895	Bos_taurus
ENSECAG00000005933	PRDM12	100	98.343	ENSCJAG00000020540	PRDM12	100	98.343	Callithrix_jacchus
ENSECAG00000005933	PRDM12	88	97.508	ENSCAFG00000023076	PRDM12	99	97.508	Canis_familiaris
ENSECAG00000005933	PRDM12	100	98.626	ENSCAFG00020024046	PRDM12	100	98.626	Canis_lupus_dingo
ENSECAG00000005933	PRDM12	100	99.171	ENSCHIG00000025005	PRDM12	100	99.171	Capra_hircus
ENSECAG00000005933	PRDM12	93	93.155	ENSCPOG00000005901	PRDM12	99	93.155	Cavia_porcellus
ENSECAG00000005933	PRDM12	100	98.347	ENSCCAG00000037485	PRDM12	100	98.347	Cebus_capucinus
ENSECAG00000005933	PRDM12	100	98.347	ENSCATG00000020327	PRDM12	100	98.347	Cercocebus_atys
ENSECAG00000005933	PRDM12	92	97.904	ENSCLAG00000005499	PRDM12	92	97.904	Chinchilla_lanigera
ENSECAG00000005933	PRDM12	100	98.077	ENSCSAG00000014756	PRDM12	100	98.077	Chlorocebus_sabaeus
ENSECAG00000005933	PRDM12	100	89.779	ENSCPBG00000022628	PRDM12	96	92.941	Chrysemys_picta_bellii
ENSECAG00000005933	PRDM12	100	97.268	ENSCGRG00001015005	Prdm12	100	97.268	Cricetulus_griseus_chok1gshd
ENSECAG00000005933	PRDM12	99	77.358	ENSCVAG00000017166	prdm12b	95	80.627	Cyprinodon_variegatus
ENSECAG00000005933	PRDM12	99	72.308	ENSCVAG00000000944	-	91	77.401	Cyprinodon_variegatus
ENSECAG00000005933	PRDM12	99	82.749	ENSDARG00000007430	prdm12b	95	85.838	Danio_rerio
ENSECAG00000005933	PRDM12	99	97.521	ENSDNOG00000042302	PRDM12	99	97.521	Dasypus_novemcinctus
ENSECAG00000005933	PRDM12	89	62.678	ENSEBUG00000016780	prdm12b	78	64.103	Eptatretus_burgeri
ENSECAG00000005933	PRDM12	100	99.724	ENSEASG00005008472	PRDM12	100	99.724	Equus_asinus_asinus
ENSECAG00000005933	PRDM12	99	77.285	ENSELUG00000013674	PRDM12	90	82.875	Esox_lucius
ENSECAG00000005933	PRDM12	99	80.000	ENSELUG00000009905	prdm12b	95	83.476	Esox_lucius
ENSECAG00000005933	PRDM12	100	98.898	ENSFCAG00000043086	PRDM12	100	98.898	Felis_catus
ENSECAG00000005933	PRDM12	100	89.779	ENSFALG00000001445	PRDM12	86	92.941	Ficedula_albicollis
ENSECAG00000005933	PRDM12	99	74.103	ENSFHEG00000007746	-	89	79.592	Fundulus_heteroclitus
ENSECAG00000005933	PRDM12	99	77.005	ENSFHEG00000003944	prdm12b	95	80.508	Fundulus_heteroclitus
ENSECAG00000005933	PRDM12	92	81.982	ENSGMOG00000011797	prdm12b	96	80.882	Gadus_morhua
ENSECAG00000005933	PRDM12	100	89.779	ENSGALG00000003895	PRDM12	96	92.941	Gallus_gallus
ENSECAG00000005933	PRDM12	100	77.067	ENSGAFG00000010827	prdm12b	93	81.429	Gambusia_affinis
ENSECAG00000005933	PRDM12	100	78.191	ENSGACG00000016713	prdm12b	94	81.662	Gasterosteus_aculeatus
ENSECAG00000005933	PRDM12	100	90.055	ENSGAGG00000014083	PRDM12	96	93.235	Gopherus_agassizii
ENSECAG00000005933	PRDM12	100	97.541	ENSGGOG00000010568	PRDM12	100	97.541	Gorilla_gorilla
ENSECAG00000005933	PRDM12	99	73.858	ENSHBUG00000022537	-	82	80.229	Haplochromis_burtoni
ENSECAG00000005933	PRDM12	99	76.455	ENSHBUG00000022878	prdm12b	94	79.320	Haplochromis_burtoni
ENSECAG00000005933	PRDM12	100	96.164	ENSHGLG00000013939	PRDM12	100	96.164	Heterocephalus_glaber_female
ENSECAG00000005933	PRDM12	90	81.287	ENSHCOG00000003663	prdm12b	93	78.237	Hippocampus_comes
ENSECAG00000005933	PRDM12	99	73.370	ENSHCOG00000021167	-	95	76.246	Hippocampus_comes
ENSECAG00000005933	PRDM12	99	76.164	ENSIPUG00000019544	PRDM12	94	79.300	Ictalurus_punctatus
ENSECAG00000005933	PRDM12	99	82.480	ENSIPUG00000017053	prdm12b	94	85.591	Ictalurus_punctatus
ENSECAG00000005933	PRDM12	99	95.000	ENSSTOG00000005986	PRDM12	88	98.817	Ictidomys_tridecemlineatus
ENSECAG00000005933	PRDM12	91	98.788	ENSJJAG00000005424	Prdm12	100	98.788	Jaculus_jaculus
ENSECAG00000005933	PRDM12	99	76.374	ENSKMAG00000021205	-	96	79.240	Kryptolebias_marmoratus
ENSECAG00000005933	PRDM12	90	78.754	ENSKMAG00000016921	prdm12b	93	76.000	Kryptolebias_marmoratus
ENSECAG00000005933	PRDM12	99	76.984	ENSLBEG00000017769	prdm12b	94	80.282	Labrus_bergylta
ENSECAG00000005933	PRDM12	99	75.457	ENSLBEG00000007776	-	89	81.602	Labrus_bergylta
ENSECAG00000005933	PRDM12	99	87.535	ENSLACG00000017560	PRDM12	96	90.560	Latimeria_chalumnae
ENSECAG00000005933	PRDM12	99	82.561	ENSLOCG00000005429	prdm12b	94	86.297	Lepisosteus_oculatus
ENSECAG00000005933	PRDM12	98	96.111	ENSLAFG00000006979	PRDM12	97	96.111	Loxodonta_africana
ENSECAG00000005933	PRDM12	100	95.913	ENSMFAG00000040322	PRDM12	100	95.913	Macaca_fascicularis
ENSECAG00000005933	PRDM12	100	98.347	ENSMNEG00000037234	PRDM12	100	98.347	Macaca_nemestrina
ENSECAG00000005933	PRDM12	90	81.250	ENSMAMG00000018988	-	86	81.250	Mastacembelus_armatus
ENSECAG00000005933	PRDM12	99	76.640	ENSMAMG00000013212	prdm12b	94	80.682	Mastacembelus_armatus
ENSECAG00000005933	PRDM12	99	73.485	ENSMZEG00005000415	PRDM12	88	80.229	Maylandia_zebra
ENSECAG00000005933	PRDM12	98	90.169	ENSMGAG00000005438	PRDM12	96	92.941	Meleagris_gallopavo
ENSECAG00000005933	PRDM12	100	95.890	ENSMAUG00000013040	Prdm12	100	95.890	Mesocricetus_auratus
ENSECAG00000005933	PRDM12	100	98.066	ENSMICG00000015480	PRDM12	100	98.066	Microcebus_murinus
ENSECAG00000005933	PRDM12	98	95.480	ENSMOCG00000021026	Prdm12	93	98.246	Microtus_ochrogaster
ENSECAG00000005933	PRDM12	100	91.713	ENSMODG00000012108	PRDM12	96	95.000	Monodelphis_domestica
ENSECAG00000005933	PRDM12	99	66.400	ENSMALG00000021901	prdm12b	93	68.966	Monopterus_albus
ENSECAG00000005933	PRDM12	100	97.808	MGP_CAROLIEiJ_G0023414	Prdm12	100	97.808	Mus_caroli
ENSECAG00000005933	PRDM12	100	97.808	ENSMUSG00000079466	Prdm12	100	97.808	Mus_musculus
ENSECAG00000005933	PRDM12	100	97.808	MGP_PahariEiJ_G0024871	Prdm12	100	97.808	Mus_pahari
ENSECAG00000005933	PRDM12	100	97.808	MGP_SPRETEiJ_G0024331	Prdm12	100	97.808	Mus_spretus
ENSECAG00000005933	PRDM12	100	95.028	ENSNGAG00000018480	Prdm12	100	95.028	Nannospalax_galili
ENSECAG00000005933	PRDM12	99	75.328	ENSNBRG00000006727	prdm12b	94	78.652	Neolamprologus_brichardi
ENSECAG00000005933	PRDM12	99	72.849	ENSNBRG00000024312	-	97	75.645	Neolamprologus_brichardi
ENSECAG00000005933	PRDM12	100	81.492	ENSMEUG00000003828	PRDM12	96	84.118	Notamacropus_eugenii
ENSECAG00000005933	PRDM12	91	98.485	ENSOPRG00000008680	PRDM12	100	98.485	Ochotona_princeps
ENSECAG00000005933	PRDM12	95	97.959	ENSODEG00000016282	PRDM12	64	97.959	Octodon_degus
ENSECAG00000005933	PRDM12	62	89.778	ENSOANG00000001043	PRDM12	94	95.567	Ornithorhynchus_anatinus
ENSECAG00000005933	PRDM12	86	94.249	ENSOCUG00000008241	PRDM12	100	94.249	Oryctolagus_cuniculus
ENSECAG00000005933	PRDM12	99	73.333	ENSORLG00000017558	-	89	79.023	Oryzias_latipes
ENSECAG00000005933	PRDM12	100	75.989	ENSORLG00000007114	prdm12b	94	79.609	Oryzias_latipes
ENSECAG00000005933	PRDM12	99	73.146	ENSORLG00020013167	-	89	78.797	Oryzias_latipes_hni
ENSECAG00000005933	PRDM12	90	81.395	ENSORLG00020019565	prdm12b	94	79.330	Oryzias_latipes_hni
ENSECAG00000005933	PRDM12	99	73.333	ENSORLG00015003435	-	89	79.023	Oryzias_latipes_hsok
ENSECAG00000005933	PRDM12	100	75.462	ENSORLG00015007621	prdm12b	94	79.387	Oryzias_latipes_hsok
ENSECAG00000005933	PRDM12	99	76.455	ENSOMEG00000004134	prdm12b	94	78.947	Oryzias_melastigma
ENSECAG00000005933	PRDM12	99	74.479	ENSOMEG00000007762	-	97	77.348	Oryzias_melastigma
ENSECAG00000005933	PRDM12	92	99.399	ENSOGAG00000007557	PRDM12	100	99.399	Otolemur_garnettii
ENSECAG00000005933	PRDM12	79	98.606	ENSPPAG00000031506	-	97	98.606	Pan_paniscus
ENSECAG00000005933	PRDM12	100	87.328	ENSPPRG00000023024	PRDM12	87	90.616	Panthera_pardus
ENSECAG00000005933	PRDM12	100	97.814	ENSPTRG00000021475	PRDM12	100	97.814	Pan_troglodytes
ENSECAG00000005933	PRDM12	100	97.814	ENSPTRG00000043324	-	100	97.814	Pan_troglodytes
ENSECAG00000005933	PRDM12	100	98.347	ENSPANG00000025967	PRDM12	100	98.347	Papio_anubis
ENSECAG00000005933	PRDM12	99	80.851	ENSPKIG00000007228	prdm12b	95	84.659	Paramormyrops_kingsleyae
ENSECAG00000005933	PRDM12	94	78.632	ENSPKIG00000004305	PRDM12	99	78.571	Paramormyrops_kingsleyae
ENSECAG00000005933	PRDM12	100	89.227	ENSPSIG00000006739	PRDM12	96	92.353	Pelodiscus_sinensis
ENSECAG00000005933	PRDM12	99	73.368	ENSPMGG00000002356	-	87	81.194	Periophthalmus_magnuspinnatus
ENSECAG00000005933	PRDM12	100	77.249	ENSPMGG00000008867	prdm12b	94	81.662	Periophthalmus_magnuspinnatus
ENSECAG00000005933	PRDM12	96	95.690	ENSPEMG00000009969	Prdm12	95	95.129	Peromyscus_maniculatus_bairdii
ENSECAG00000005933	PRDM12	100	91.989	ENSPCIG00000024119	PRDM12	96	95.294	Phascolarctos_cinereus
ENSECAG00000005933	PRDM12	99	78.284	ENSPFOG00000019841	prdm12b	94	81.197	Poecilia_formosa
ENSECAG00000005933	PRDM12	91	83.333	ENSPLAG00000016626	prdm12b	93	80.453	Poecilia_latipinna
ENSECAG00000005933	PRDM12	88	82.822	ENSPMEG00000016698	prdm12b	93	79.883	Poecilia_mexicana
ENSECAG00000005933	PRDM12	91	83.186	ENSPREG00000015073	prdm12b	89	83.186	Poecilia_reticulata
ENSECAG00000005933	PRDM12	96	74.167	ENSPREG00000003211	-	93	76.627	Poecilia_reticulata
ENSECAG00000005933	PRDM12	97	96.296	ENSPPYG00000019694	PRDM12	100	96.296	Pongo_abelii
ENSECAG00000005933	PRDM12	100	97.814	ENSPCOG00000022255	PRDM12	100	97.814	Propithecus_coquereli
ENSECAG00000005933	PRDM12	100	96.995	ENSPVAG00000001511	PRDM12	100	96.995	Pteropus_vampyrus
ENSECAG00000005933	PRDM12	99	73.485	ENSPNYG00000013589	-	88	80.229	Pundamilia_nyererei
ENSECAG00000005933	PRDM12	99	75.789	ENSPNYG00000009607	prdm12b	94	78.592	Pundamilia_nyererei
ENSECAG00000005933	PRDM12	99	74.731	ENSPNAG00000013396	PRDM12	92	78.198	Pygocentrus_nattereri
ENSECAG00000005933	PRDM12	99	83.152	ENSPNAG00000024532	prdm12b	94	86.744	Pygocentrus_nattereri
ENSECAG00000005933	PRDM12	100	97.808	ENSRNOG00000009218	Prdm12	100	97.808	Rattus_norvegicus
ENSECAG00000005933	PRDM12	88	99.369	ENSRBIG00000042712	PRDM12	96	92.550	Rhinopithecus_bieti
ENSECAG00000005933	PRDM12	89	99.377	ENSRROG00000043554	PRDM12	100	99.377	Rhinopithecus_roxellana
ENSECAG00000005933	PRDM12	100	91.185	ENSSHAG00000015972	PRDM12	96	94.428	Sarcophilus_harrisii
ENSECAG00000005933	PRDM12	99	74.036	ENSSMAG00000003754	prdm12b	90	80.342	Scophthalmus_maximus
ENSECAG00000005933	PRDM12	99	75.515	ENSSDUG00000023498	prdm12b	94	78.670	Seriola_dumerili
ENSECAG00000005933	PRDM12	94	81.395	ENSSDUG00000019071	-	95	81.395	Seriola_dumerili
ENSECAG00000005933	PRDM12	99	75.844	ENSSLDG00000009557	prdm12b	94	79.330	Seriola_lalandi_dorsalis
ENSECAG00000005933	PRDM12	99	78.788	ENSSLDG00000013562	-	97	81.818	Seriola_lalandi_dorsalis
ENSECAG00000005933	PRDM12	100	89.779	ENSSPUG00000013424	PRDM12	96	92.941	Sphenodon_punctatus
ENSECAG00000005933	PRDM12	99	66.580	ENSSPAG00000022420	-	87	74.769	Stegastes_partitus
ENSECAG00000005933	PRDM12	99	76.115	ENSSPAG00000018824	prdm12b	94	79.272	Stegastes_partitus
ENSECAG00000005933	PRDM12	100	98.626	ENSSSCG00000005703	PRDM12	100	98.626	Sus_scrofa
ENSECAG00000005933	PRDM12	99	77.660	ENSTRUG00000018659	prdm12b	94	81.556	Takifugu_rubripes
ENSECAG00000005933	PRDM12	99	75.881	ENSTRUG00000013239	-	93	81.627	Takifugu_rubripes
ENSECAG00000005933	PRDM12	99	76.022	ENSTNIG00000005859	-	92	80.909	Tetraodon_nigroviridis
ENSECAG00000005933	PRDM12	99	77.984	ENSTNIG00000009020	prdm12b	89	84.685	Tetraodon_nigroviridis
ENSECAG00000005933	PRDM12	96	98.281	ENSUAMG00000009653	PRDM12	97	98.281	Ursus_americanus
ENSECAG00000005933	PRDM12	91	99.698	ENSVVUG00000027662	PRDM12	79	99.698	Vulpes_vulpes
ENSECAG00000005933	PRDM12	91	83.036	ENSXCOG00000002836	prdm12b	95	80.453	Xiphophorus_couchianus
ENSECAG00000005933	PRDM12	90	83.234	ENSXMAG00000005537	prdm12b	95	80.000	Xiphophorus_maculatus
ENSECAG00000005933	PRDM12	99	74.740	ENSXMAG00000028012	-	88	80.294	Xiphophorus_maculatus