EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSECAG00000006071 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: APOBEC3Z2e
Full Name: -
Gene Type: protein_coding
Species: Equus_caballus
Status: putative
Strand: Plus strand
Length: 28411 bases
Position: chr28:37081457-37109867
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSECAP00000005895	APOBEC_N	PF08210.11	1.5e-141	1	3
ENSECAP00000005895	APOBEC_N	PF08210.11	1.5e-141	2	3
ENSECAP00000005895	APOBEC_N	PF08210.11	1.5e-141	3	3
ENSECAP00000005477	APOBEC_N	PF08210.11	1.8e-141	1	3
ENSECAP00000005477	APOBEC_N	PF08210.11	1.8e-141	2	3
ENSECAP00000005477	APOBEC_N	PF08210.11	1.8e-141	3	3
ENSECAP00000035735	APOBEC_N	PF08210.11	6.2e-141	1	3
ENSECAP00000035735	APOBEC_N	PF08210.11	6.2e-141	2	3
ENSECAP00000035735	APOBEC_N	PF08210.11	6.2e-141	3	3
ENSECAP00000004333	APOBEC_N	PF08210.11	1e-139	1	3
ENSECAP00000004333	APOBEC_N	PF08210.11	1e-139	2	3
ENSECAP00000004333	APOBEC_N	PF08210.11	1e-139	3	3
ENSECAP00000029501	APOBEC_N	PF08210.11	1.5e-139	1	3
ENSECAP00000029501	APOBEC_N	PF08210.11	1.5e-139	2	3
ENSECAP00000029501	APOBEC_N	PF08210.11	1.5e-139	3	3
ENSECAP00000027876	APOBEC_N	PF08210.11	1.7e-139	1	3
ENSECAP00000027876	APOBEC_N	PF08210.11	1.7e-139	2	3
ENSECAP00000027876	APOBEC_N	PF08210.11	1.7e-139	3	3
ENSECAP00000040311	APOBEC_N	PF08210.11	5.5e-95	1	2
ENSECAP00000040311	APOBEC_N	PF08210.11	5.5e-95	2	2
ENSECAP00000035344	APOBEC_N	PF08210.11	3.9e-94	1	2
ENSECAP00000035344	APOBEC_N	PF08210.11	3.9e-94	2	2
ENSECAP00000028551	APOBEC_N	PF08210.11	8.7e-93	1	2
ENSECAP00000028551	APOBEC_N	PF08210.11	8.7e-93	2	2
ENSECAP00000025011	APOBEC_N	PF08210.11	9.9e-82	1	2
ENSECAP00000025011	APOBEC_N	PF08210.11	9.9e-82	2	2
ENSECAP00000035735	APOBEC_C	PF05240.14	1.1e-86	1	3
ENSECAP00000035735	APOBEC_C	PF05240.14	1.1e-86	2	3
ENSECAP00000035735	APOBEC_C	PF05240.14	1.1e-86	3	3
ENSECAP00000005895	APOBEC_C	PF05240.14	6.9e-86	1	3
ENSECAP00000005895	APOBEC_C	PF05240.14	6.9e-86	2	3
ENSECAP00000005895	APOBEC_C	PF05240.14	6.9e-86	3	3
ENSECAP00000004333	APOBEC_C	PF05240.14	2.3e-83	1	3
ENSECAP00000004333	APOBEC_C	PF05240.14	2.3e-83	2	3
ENSECAP00000004333	APOBEC_C	PF05240.14	2.3e-83	3	3
ENSECAP00000029501	APOBEC_C	PF05240.14	3.2e-83	1	3
ENSECAP00000029501	APOBEC_C	PF05240.14	3.2e-83	2	3
ENSECAP00000029501	APOBEC_C	PF05240.14	3.2e-83	3	3
ENSECAP00000005477	APOBEC_C	PF05240.14	1.4e-82	1	3
ENSECAP00000005477	APOBEC_C	PF05240.14	1.4e-82	2	3
ENSECAP00000005477	APOBEC_C	PF05240.14	1.4e-82	3	3
ENSECAP00000027876	APOBEC_C	PF05240.14	1e-81	1	3
ENSECAP00000027876	APOBEC_C	PF05240.14	1e-81	2	3
ENSECAP00000027876	APOBEC_C	PF05240.14	1e-81	3	3
ENSECAP00000035344	APOBEC_C	PF05240.14	6.7e-57	1	2
ENSECAP00000035344	APOBEC_C	PF05240.14	6.7e-57	2	2
ENSECAP00000040311	APOBEC_C	PF05240.14	6.8e-57	1	2
ENSECAP00000040311	APOBEC_C	PF05240.14	6.8e-57	2	2
ENSECAP00000028551	APOBEC_C	PF05240.14	1.8e-56	1	2
ENSECAP00000028551	APOBEC_C	PF05240.14	1.8e-56	2	2
ENSECAP00000025011	APOBEC_C	PF05240.14	1.1e-39	1	2
ENSECAP00000025011	APOBEC_C	PF05240.14	1.1e-39	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSECAT00000007949	-	1797	-	ENSECAP00000005895	598 (aa)	-	F7C985
ENSECAT00000031439	-	1985	-	ENSECAP00000028551	360 (aa)	-	-
ENSECAT00000047991	-	2097	-	ENSECAP00000040311	417 (aa)	-	-
ENSECAT00000006148	-	1668	-	ENSECAP00000004333	555 (aa)	-	F7B644
ENSECAT00000062498	-	2523	-	ENSECAP00000035735	598 (aa)	-	-
ENSECAT00000047574	-	2018	-	ENSECAP00000025011	415 (aa)	-	-
ENSECAT00000052831	-	2097	-	ENSECAP00000035344	417 (aa)	-	-
ENSECAT00000034386	-	2640	-	ENSECAP00000029501	598 (aa)	-	-
ENSECAT00000007492	-	1668	-	ENSECAP00000005477	555 (aa)	-	F7DDE1
ENSECAT00000052828	-	2640	-	ENSECAP00000027876	598 (aa)	-	-

Gene Model

Click here to download ENSECAG00000006071's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSECAG00000006071's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSECAG00000006071	-	99	38.298	ENSECAG00000022371	APOBEC3Z1B	86	41.081
ENSECAG00000006071	-	99	34.066	ENSECAG00000007726	APOBEC3H	79	34.737
ENSECAG00000006071	-	99	37.912	ENSECAG00000032756	-	67	39.444
ENSECAG00000006071	-	56	40.594	ENSECAG00000017163	APOBEC1	57	40.594
ENSECAG00000006071	-	95	45.604	ENSECAG00000018578	AICDA	88	45.604
ENSECAG00000006071	-	99	36.066	ENSECAG00000006576	APOBEC2	88	36.066

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSECAG00000006071	-	100	47.849	ENSG00000244509	APOBEC3C	98	47.849	Homo_sapiens
ENSECAG00000006071	-	100	46.237	ENSG00000243811	APOBEC3D	99	47.027	Homo_sapiens
ENSECAG00000006071	-	100	44.536	ENSG00000128394	APOBEC3F	99	49.730	Homo_sapiens
ENSECAG00000006071	-	99	48.619	ENSANAG00000030088	-	98	48.087	Aotus_nancymaae
ENSECAG00000006071	-	71	54.615	ENSCJAG00000015317	-	100	54.615	Callithrix_jacchus
ENSECAG00000006071	-	99	44.865	ENSCAFG00020002615	-	98	44.865	Canis_lupus_dingo
ENSECAG00000006071	-	100	43.288	ENSTSYG00000034260	-	98	45.109	Carlito_syrichta
ENSECAG00000006071	-	99	45.902	ENSTSYG00000028254	-	99	47.945	Carlito_syrichta
ENSECAG00000006071	-	99	43.956	ENSTSYG00000030036	-	99	44.505	Carlito_syrichta
ENSECAG00000006071	-	100	47.938	ENSCCAG00000030932	-	90	48.925	Cebus_capucinus
ENSECAG00000006071	-	98	51.087	ENSCATG00000033502	-	99	49.730	Cercocebus_atys
ENSECAG00000006071	-	100	45.699	ENSCATG00000043226	APOBEC3C	98	46.622	Cercocebus_atys
ENSECAG00000006071	-	100	43.443	ENSCSAG00000006382	APOBEC3F	99	48.108	Chlorocebus_sabaeus
ENSECAG00000006071	-	100	46.703	ENSCSAG00000006402	APOBEC3C	98	47.973	Chlorocebus_sabaeus
ENSECAG00000006071	-	98	45.822	ENSCANG00000031957	-	100	47.027	Colobus_angolensis_palliatus
ENSECAG00000006071	-	100	44.536	ENSCANG00000032904	-	99	49.730	Colobus_angolensis_palliatus
ENSECAG00000006071	-	98	50.000	ENSCANG00000033269	-	99	50.000	Colobus_angolensis_palliatus
ENSECAG00000006071	-	100	46.154	ENSCANG00000039177	APOBEC3C	98	47.312	Colobus_angolensis_palliatus
ENSECAG00000006071	-	98	44.262	ENSDNOG00000044642	-	99	44.262	Dasypus_novemcinctus
ENSECAG00000006071	-	98	83.420	ENSEASG00005018641	-	96	83.420	Equus_asinus_asinus
ENSECAG00000006071	-	100	47.849	ENSGGOG00000036587	-	98	47.849	Gorilla_gorilla
ENSECAG00000006071	-	100	43.169	ENSGGOG00000038678	APOBEC3F	99	49.730	Gorilla_gorilla
ENSECAG00000006071	-	100	42.473	ENSHGLG00000017315	-	92	42.473	Heterocephalus_glaber_female
ENSECAG00000006071	-	100	42.473	ENSHGLG00100003105	-	93	43.072	Heterocephalus_glaber_male
ENSECAG00000006071	-	100	44.262	ENSMFAG00000004037	APOBEC3F	99	50.270	Macaca_fascicularis
ENSECAG00000006071	-	100	44.809	ENSMFAG00000002331	-	99	48.108	Macaca_fascicularis
ENSECAG00000006071	-	100	46.703	ENSMFAG00000016792	APOBEC3C	98	47.973	Macaca_fascicularis
ENSECAG00000006071	-	98	51.351	ENSMMUG00000004017	APOBEC3F	100	50.270	Macaca_mulatta
ENSECAG00000006071	-	100	45.604	ENSMMUG00000004018	APOBEC3C	95	47.619	Macaca_mulatta
ENSECAG00000006071	-	100	46.154	ENSMNEG00000045196	APOBEC3C	98	47.973	Macaca_nemestrina
ENSECAG00000006071	-	100	42.894	ENSMNEG00000043316	APOBEC3D	99	49.730	Macaca_nemestrina
ENSECAG00000006071	-	100	44.809	ENSMLEG00000029642	APOBEC3F	99	49.730	Mandrillus_leucophaeus
ENSECAG00000006071	-	100	46.703	ENSMLEG00000036992	APOBEC3C	98	47.312	Mandrillus_leucophaeus
ENSECAG00000006071	-	99	42.473	ENSMICG00000042615	-	96	42.077	Microcebus_murinus
ENSECAG00000006071	-	99	45.161	ENSMLUG00000023676	-	99	45.745	Myotis_lucifugus
ENSECAG00000006071	-	100	41.463	ENSNLEG00000035811	-	99	43.284	Nomascus_leucogenys
ENSECAG00000006071	-	100	46.774	ENSNLEG00000028392	APOBEC3C	98	48.387	Nomascus_leucogenys
ENSECAG00000006071	-	99	40.719	ENSOGAG00000033404	-	99	40.719	Otolemur_garnettii
ENSECAG00000006071	-	100	39.257	ENSOGAG00000032498	-	100	42.391	Otolemur_garnettii
ENSECAG00000006071	-	100	39.459	ENSOGAG00000030300	-	98	42.177	Otolemur_garnettii
ENSECAG00000006071	-	100	47.849	ENSPPAG00000014118	APOBEC3C	98	47.849	Pan_paniscus
ENSECAG00000006071	-	100	47.742	ENSPPAG00000028218	-	99	48.387	Pan_paniscus
ENSECAG00000006071	-	100	46.486	ENSPPRG00000003726	-	98	48.108	Panthera_pardus
ENSECAG00000006071	-	100	47.312	ENSPTRG00000041588	APOBEC3D	100	47.283	Pan_troglodytes
ENSECAG00000006071	-	98	48.913	ENSPTRG00000014385	APOBEC3C	100	48.913	Pan_troglodytes
ENSECAG00000006071	-	98	49.189	ENSPANG00000010775	APOBEC3F	100	49.189	Papio_anubis
ENSECAG00000006071	-	100	46.774	ENSPPYG00000011832	APOBEC3C	98	48.387	Pongo_abelii
ENSECAG00000006071	-	71	52.000	ENSPCOG00000018072	-	100	53.061	Propithecus_coquereli
ENSECAG00000006071	-	67	53.543	ENSPCOG00000022067	-	97	53.543	Propithecus_coquereli
ENSECAG00000006071	-	91	65.625	ENSPVAG00000009461	-	71	65.625	Pteropus_vampyrus
ENSECAG00000006071	-	100	47.253	ENSRBIG00000030834	-	100	47.423	Rhinopithecus_bieti
ENSECAG00000006071	-	98	51.892	ENSRBIG00000030323	-	100	51.892	Rhinopithecus_bieti
ENSECAG00000006071	-	99	46.667	ENSRBIG00000042297	-	99	50.318	Rhinopithecus_bieti
ENSECAG00000006071	-	100	47.253	ENSRROG00000028557	-	100	47.283	Rhinopithecus_roxellana
ENSECAG00000006071	-	100	48.387	ENSRROG00000029045	APOBEC3C	99	51.892	Rhinopithecus_roxellana
ENSECAG00000006071	-	99	46.154	ENSRROG00000029996	-	99	46.561	Rhinopithecus_roxellana
ENSECAG00000006071	-	100	50.000	ENSSBOG00000032780	-	100	49.730	Saimiri_boliviensis_boliviensis
ENSECAG00000006071	-	99	51.099	ENSUAMG00000004433	-	100	52.747	Ursus_americanus
ENSECAG00000006071	-	100	51.351	ENSUMAG00000014441	-	92	52.973	Ursus_maritimus
ENSECAG00000006071	-	78	47.945	ENSVVUG00000014628	-	91	48.966	Vulpes_vulpes