EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSECAG00000006090 (Gene tree)
Gene ID: 102149423
Gene Symbol: -
Alias: -
Full Name: PWP2%2C small subunit processome component
Gene Type: protein_coding
Species: Equus_caballus
Status: putative
Strand: Plus strand
Length: 17850 bases
Position: chr26:40644696-40662545
Accession: 102149423
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSECAP00000005076	Utp12	PF04003.12	1.3e-22	1	1
ENSECAP00000039453	Utp12	PF04003.12	4.4e-19	1	1
ENSECAP00000037970	Utp12	PF04003.12	8.9e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSECAT00000058473	-	2709	-	ENSECAP00000037970	902 (aa)	-	-
ENSECAT00000057217	-	2802	-	ENSECAP00000039453	933 (aa)	-	-
ENSECAT00000007027	-	2784	-	ENSECAP00000005076	927 (aa)	XP_023486033	F7E2G5

Gene Model

Click here to download ENSECAG00000006090's gene model file

Pathways

Pathway ID	Pathway Name	Source
ecb03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSECAG00000006090's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSECAG00000006090	-	100	89.752	ENSG00000241945	PWP2	98	90.768	Homo_sapiens
ENSECAG00000006090	-	96	71.991	ENSAPOG00000021522	pwp2h	98	71.795	Acanthochromis_polyacanthus
ENSECAG00000006090	-	98	90.889	ENSAMEG00000010907	-	98	91.416	Ailuropoda_melanoleuca
ENSECAG00000006090	-	96	72.952	ENSACIG00000024109	pwp2h	97	72.636	Amphilophus_citrinellus
ENSECAG00000006090	-	95	72.122	ENSAOCG00000014853	pwp2h	98	71.766	Amphiprion_ocellaris
ENSECAG00000006090	-	95	71.896	ENSAPEG00000008152	pwp2h	98	71.094	Amphiprion_percula
ENSECAG00000006090	-	95	72.266	ENSATEG00000015493	pwp2h	100	72.538	Anabas_testudineus
ENSECAG00000006090	-	95	77.314	ENSAPLG00000010371	-	97	76.398	Anas_platyrhynchos
ENSECAG00000006090	-	98	75.000	ENSACAG00000017861	-	98	75.866	Anolis_carolinensis
ENSECAG00000006090	-	99	88.949	ENSANAG00000034845	-	97	90.279	Aotus_nancymaae
ENSECAG00000006090	-	96	72.870	ENSACLG00000011425	pwp2h	98	72.111	Astatotilapia_calliptera
ENSECAG00000006090	-	97	70.099	ENSAMXG00000007988	pwp2h	97	69.660	Astyanax_mexicanus
ENSECAG00000006090	-	99	93.702	ENSBTAG00000007105	-	97	93.993	Bos_taurus
ENSECAG00000006090	-	98	38.361	WBGene00018891	F55F8.3	97	37.800	Caenorhabditis_elegans
ENSECAG00000006090	-	100	88.673	ENSCJAG00000005570	-	97	90.279	Callithrix_jacchus
ENSECAG00000006090	-	97	92.018	ENSCAFG00000010687	-	98	91.880	Canis_familiaris
ENSECAG00000006090	-	81	91.845	ENSCAFG00020019199	-	88	91.678	Canis_lupus_dingo
ENSECAG00000006090	-	99	88.121	ENSCHIG00000026362	-	98	88.385	Capra_hircus
ENSECAG00000006090	-	100	89.752	ENSTSYG00000009022	-	97	91.183	Carlito_syrichta
ENSECAG00000006090	-	99	89.301	ENSCAPG00000017934	-	97	90.428	Cavia_aperea
ENSECAG00000006090	-	99	89.262	ENSCPOG00000023616	-	97	90.380	Cavia_porcellus
ENSECAG00000006090	-	100	89.320	ENSCCAG00000034616	-	97	91.173	Cebus_capucinus
ENSECAG00000006090	-	100	90.076	ENSCATG00000032550	-	98	90.990	Cercocebus_atys
ENSECAG00000006090	-	100	88.457	ENSCLAG00000009503	-	98	89.544	Chinchilla_lanigera
ENSECAG00000006090	-	100	89.644	ENSCSAG00000007903	-	98	90.656	Chlorocebus_sabaeus
ENSECAG00000006090	-	96	78.941	ENSCPBG00000018335	-	98	78.547	Chrysemys_picta_bellii
ENSECAG00000006090	-	96	56.747	ENSCSAVG00000004186	-	97	56.314	Ciona_savignyi
ENSECAG00000006090	-	100	90.291	ENSCANG00000028013	-	98	91.435	Colobus_angolensis_palliatus
ENSECAG00000006090	-	98	89.629	ENSCGRG00001020074	Pwp2	98	90.244	Cricetulus_griseus_chok1gshd
ENSECAG00000006090	-	98	89.629	ENSCGRG00000003750	Pwp2	98	90.244	Cricetulus_griseus_crigri
ENSECAG00000006090	-	96	71.973	ENSCSEG00000000861	pwp2h	98	71.444	Cynoglossus_semilaevis
ENSECAG00000006090	-	98	70.925	ENSCVAG00000000996	pwp2h	99	71.444	Cyprinodon_variegatus
ENSECAG00000006090	-	98	67.570	ENSDARG00000037109	pwp2h	97	68.247	Danio_rerio
ENSECAG00000006090	-	86	87.343	ENSDNOG00000012128	-	98	87.580	Dasypus_novemcinctus
ENSECAG00000006090	-	95	82.540	ENSDORG00000003015	Pwp2	93	84.371	Dipodomys_ordii
ENSECAG00000006090	-	97	46.623	FBgn0033557	CG12325	96	46.950	Drosophila_melanogaster
ENSECAG00000006090	-	84	63.636	ENSEBUG00000003140	pwp2h	95	63.252	Eptatretus_burgeri
ENSECAG00000006090	-	100	99.245	ENSEASG00005001651	-	100	99.245	Equus_asinus_asinus
ENSECAG00000006090	-	98	70.692	ENSELUG00000001878	pwp2h	98	71.175	Esox_lucius
ENSECAG00000006090	-	96	91.807	ENSFCAG00000004487	-	98	91.657	Felis_catus
ENSECAG00000006090	-	97	76.829	ENSFALG00000012300	-	98	76.983	Ficedula_albicollis
ENSECAG00000006090	-	98	88.449	ENSFDAG00000016140	-	98	88.914	Fukomys_damarensis
ENSECAG00000006090	-	95	71.545	ENSFHEG00000009078	pwp2h	100	72.222	Fundulus_heteroclitus
ENSECAG00000006090	-	95	70.535	ENSGMOG00000016522	pwp2h	97	70.079	Gadus_morhua
ENSECAG00000006090	-	99	76.009	ENSGALG00000045726	-	98	77.095	Gallus_gallus
ENSECAG00000006090	-	98	71.663	ENSGAFG00000011340	pwp2h	99	71.272	Gambusia_affinis
ENSECAG00000006090	-	96	70.946	ENSGACG00000014928	pwp2h	99	69.964	Gasterosteus_aculeatus
ENSECAG00000006090	-	97	78.256	ENSGAGG00000005377	-	98	78.771	Gopherus_agassizii
ENSECAG00000006090	-	100	89.536	ENSGGOG00000041875	-	98	90.768	Gorilla_gorilla
ENSECAG00000006090	-	96	73.094	ENSHBUG00000005530	pwp2h	98	72.333	Haplochromis_burtoni
ENSECAG00000006090	-	100	86.624	ENSHGLG00000017401	-	98	88.380	Heterocephalus_glaber_female
ENSECAG00000006090	-	99	85.946	ENSHGLG00100013888	-	98	87.682	Heterocephalus_glaber_male
ENSECAG00000006090	-	97	68.973	ENSHCOG00000018121	pwp2h	96	68.973	Hippocampus_comes
ENSECAG00000006090	-	98	68.438	ENSIPUG00000014074	pwp2h	98	68.456	Ictalurus_punctatus
ENSECAG00000006090	-	99	88.646	ENSSTOG00000014194	-	97	89.210	Ictidomys_tridecemlineatus
ENSECAG00000006090	-	99	88.877	ENSJJAG00000013039	Pwp2	98	89.766	Jaculus_jaculus
ENSECAG00000006090	-	96	71.509	ENSKMAG00000003143	pwp2h	98	71.111	Kryptolebias_marmoratus
ENSECAG00000006090	-	96	72.041	ENSLBEG00000006388	pwp2h	97	71.844	Labrus_bergylta
ENSECAG00000006090	-	92	72.685	ENSLACG00000006084	pwp2h	98	72.074	Latimeria_chalumnae
ENSECAG00000006090	-	98	69.891	ENSLOCG00000003663	pwp2h	96	71.509	Lepisosteus_oculatus
ENSECAG00000006090	-	95	89.744	ENSLAFG00000003871	-	100	90.846	Loxodonta_africana
ENSECAG00000006090	-	100	89.860	ENSMFAG00000044448	-	98	90.768	Macaca_fascicularis
ENSECAG00000006090	-	100	89.860	ENSMMUG00000005271	PWP2	98	90.768	Macaca_mulatta
ENSECAG00000006090	-	100	89.968	ENSMNEG00000030782	-	98	90.879	Macaca_nemestrina
ENSECAG00000006090	-	100	89.860	ENSMLEG00000039860	-	98	90.768	Mandrillus_leucophaeus
ENSECAG00000006090	-	96	72.622	ENSMAMG00000022327	pwp2h	97	72.299	Mastacembelus_armatus
ENSECAG00000006090	-	96	72.758	ENSMZEG00005015448	pwp2h	98	72.000	Maylandia_zebra
ENSECAG00000006090	-	97	69.570	ENSMGAG00000014596	-	98	69.358	Meleagris_gallopavo
ENSECAG00000006090	-	92	62.383	ENSMAUG00000020265	Pwp2	91	63.551	Mesocricetus_auratus
ENSECAG00000006090	-	100	89.860	ENSMICG00000001002	-	98	90.768	Microcebus_murinus
ENSECAG00000006090	-	100	88.901	ENSMOCG00000003844	Pwp2	98	90.556	Microtus_ochrogaster
ENSECAG00000006090	-	95	69.852	ENSMMOG00000000882	pwp2h	100	69.852	Mola_mola
ENSECAG00000006090	-	98	82.585	ENSMODG00000021081	-	98	83.519	Monodelphis_domestica
ENSECAG00000006090	-	98	72.155	ENSMALG00000000821	pwp2h	98	72.737	Monopterus_albus
ENSECAG00000006090	-	98	88.828	MGP_CAROLIEiJ_G0015505	Pwp2	98	89.433	Mus_caroli
ENSECAG00000006090	-	98	89.266	ENSMUSG00000032834	Pwp2	98	89.655	Mus_musculus
ENSECAG00000006090	-	98	88.828	MGP_PahariEiJ_G0030918	Pwp2	98	89.433	Mus_pahari
ENSECAG00000006090	-	98	89.157	MGP_SPRETEiJ_G0016318	Pwp2	98	89.544	Mus_spretus
ENSECAG00000006090	-	87	89.715	ENSMPUG00000009936	-	97	91.271	Mustela_putorius_furo
ENSECAG00000006090	-	97	87.154	ENSMLUG00000004823	-	97	86.889	Myotis_lucifugus
ENSECAG00000006090	-	99	89.599	ENSNGAG00000021106	Pwp2	98	90.323	Nannospalax_galili
ENSECAG00000006090	-	96	71.665	ENSNBRG00000016527	pwp2h	97	71.366	Neolamprologus_brichardi
ENSECAG00000006090	-	96	90.214	ENSNLEG00000001928	-	100	89.989	Nomascus_leucogenys
ENSECAG00000006090	-	99	88.478	ENSODEG00000013073	-	98	89.350	Octodon_degus
ENSECAG00000006090	-	96	72.758	ENSONIG00000007136	pwp2h	98	72.000	Oreochromis_niloticus
ENSECAG00000006090	-	97	78.912	ENSOANG00000006477	-	98	78.912	Ornithorhynchus_anatinus
ENSECAG00000006090	-	98	70.569	ENSORLG00000000066	pwp2h	98	71.222	Oryzias_latipes
ENSECAG00000006090	-	98	70.788	ENSORLG00020000321	pwp2h	98	71.444	Oryzias_latipes_hni
ENSECAG00000006090	-	98	66.959	ENSORLG00015014731	pwp2h	98	67.556	Oryzias_latipes_hsok
ENSECAG00000006090	-	97	72.873	ENSOMEG00000020671	pwp2h	99	56.341	Oryzias_melastigma
ENSECAG00000006090	-	96	90.899	ENSOGAG00000012473	-	98	90.768	Otolemur_garnettii
ENSECAG00000006090	-	99	89.935	ENSOARG00000011672	-	97	92.940	Ovis_aries
ENSECAG00000006090	-	96	90.797	ENSPPAG00000037874	-	98	90.545	Pan_paniscus
ENSECAG00000006090	-	96	92.368	ENSPPRG00000011088	-	98	92.214	Panthera_pardus
ENSECAG00000006090	-	99	82.449	ENSPTIG00000020872	-	97	83.389	Panthera_tigris_altaica
ENSECAG00000006090	-	100	89.536	ENSPTRG00000013969	-	98	90.545	Pan_troglodytes
ENSECAG00000006090	-	100	89.536	ENSPANG00000006267	-	98	90.535	Papio_anubis
ENSECAG00000006090	-	97	71.818	ENSPKIG00000002693	pwp2h	100	73.127	Paramormyrops_kingsleyae
ENSECAG00000006090	-	96	77.928	ENSPSIG00000009783	-	98	77.806	Pelodiscus_sinensis
ENSECAG00000006090	-	95	72.185	ENSPMGG00000022349	pwp2h	97	71.540	Periophthalmus_magnuspinnatus
ENSECAG00000006090	-	96	91.358	ENSPEMG00000009968	Pwp2	98	90.667	Peromyscus_maniculatus_bairdii
ENSECAG00000006090	-	98	82.366	ENSPCIG00000014548	-	98	83.371	Phascolarctos_cinereus
ENSECAG00000006090	-	96	73.055	ENSPFOG00000014764	pwp2h	98	72.667	Poecilia_formosa
ENSECAG00000006090	-	96	72.943	ENSPLAG00000011559	pwp2h	98	72.556	Poecilia_latipinna
ENSECAG00000006090	-	96	73.055	ENSPMEG00000021347	pwp2h	98	72.667	Poecilia_mexicana
ENSECAG00000006090	-	96	73.168	ENSPREG00000015887	pwp2h	98	72.768	Poecilia_reticulata
ENSECAG00000006090	-	100	89.752	ENSPPYG00000011478	-	97	90.545	Pongo_abelii
ENSECAG00000006090	-	99	85.000	ENSPCAG00000004676	-	98	85.539	Procavia_capensis
ENSECAG00000006090	-	99	88.649	ENSPCOG00000012856	-	98	90.100	Propithecus_coquereli
ENSECAG00000006090	-	99	84.365	ENSPVAG00000002312	-	98	85.317	Pteropus_vampyrus
ENSECAG00000006090	-	74	71.449	ENSPNYG00000008379	pwp2h	96	70.487	Pundamilia_nyererei
ENSECAG00000006090	-	95	70.279	ENSPNAG00000017876	pwp2h	98	69.332	Pygocentrus_nattereri
ENSECAG00000006090	-	98	88.731	ENSRNOG00000001210	Pwp2	98	89.556	Rattus_norvegicus
ENSECAG00000006090	-	100	89.644	ENSRBIG00000034365	-	98	90.545	Rhinopithecus_bieti
ENSECAG00000006090	-	100	89.752	ENSRROG00000031946	-	98	90.656	Rhinopithecus_roxellana
ENSECAG00000006090	-	97	43.873	YCR057C	PWP2	92	43.757	Saccharomyces_cerevisiae
ENSECAG00000006090	-	99	88.973	ENSSBOG00000034554	-	97	90.797	Saimiri_boliviensis_boliviensis
ENSECAG00000006090	-	98	71.600	ENSSFOG00015003316	pwp2	98	72.586	Scleropages_formosus
ENSECAG00000006090	-	95	73.708	ENSSMAG00000011839	pwp2h	97	72.514	Scophthalmus_maximus
ENSECAG00000006090	-	96	72.943	ENSSDUG00000011462	pwp2h	97	72.737	Seriola_dumerili
ENSECAG00000006090	-	96	73.168	ENSSLDG00000008651	pwp2h	97	72.849	Seriola_lalandi_dorsalis
ENSECAG00000006090	-	97	78.556	ENSSPUG00000002980	-	100	78.333	Sphenodon_punctatus
ENSECAG00000006090	-	96	72.340	ENSSPAG00000023368	pwp2h	98	72.000	Stegastes_partitus
ENSECAG00000006090	-	99	91.027	ENSSSCG00000029627	-	98	91.880	Sus_scrofa
ENSECAG00000006090	-	95	76.836	ENSTGUG00000005996	-	100	76.723	Taeniopygia_guttata
ENSECAG00000006090	-	62	72.987	ENSTGUG00000018216	-	100	73.036	Taeniopygia_guttata
ENSECAG00000006090	-	98	70.342	ENSTRUG00000013258	pwp2h	98	71.091	Takifugu_rubripes
ENSECAG00000006090	-	96	70.270	ENSTNIG00000010613	pwp2h	98	69.482	Tetraodon_nigroviridis
ENSECAG00000006090	-	82	91.132	ENSTBEG00000015597	-	87	90.755	Tupaia_belangeri
ENSECAG00000006090	-	95	91.472	ENSTTRG00000006728	-	100	92.575	Tursiops_truncatus
ENSECAG00000006090	-	99	91.522	ENSUAMG00000019031	-	99	91.517	Ursus_americanus
ENSECAG00000006090	-	98	89.290	ENSUMAG00000025481	-	97	89.521	Ursus_maritimus
ENSECAG00000006090	-	98	91.621	ENSVVUG00000024125	-	98	91.212	Vulpes_vulpes
ENSECAG00000006090	-	67	60.345	ENSXETG00000018002	pwp2	88	58.480	Xenopus_tropicalis
ENSECAG00000006090	-	96	69.032	ENSXCOG00000020474	pwp2h	98	68.785	Xiphophorus_couchianus
ENSECAG00000006090	-	98	72.009	ENSXMAG00000008124	pwp2h	99	72.296	Xiphophorus_maculatus