EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSECAG00000006127 (Gene tree)
Gene ID: 100059018
Gene Symbol: SBNO1
Alias: -
Full Name: strawberry notch homolog 1
Gene Type: protein_coding
Species: Equus_caballus
Status: putative
Strand: Minus strand
Length: 38609 bases
Position: chr8:25748846-25787454
Accession: 49376
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSECAP00000043355	ResIII	PF04851.15	1.3e-07	1	1
ENSECAP00000005490	ResIII	PF04851.15	1.4e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSECAT00000052466	-	6074	-	ENSECAP00000043355	1355 (aa)	-	-
ENSECAT00000007507	-	4182	-	ENSECAP00000005490	1393 (aa)	XP_023503049	F7D8N7

Gene Model

Click here to download ENSECAG00000006127's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSECAG00000006127's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSECAG00000006127	SBNO1	71	67.347	ENSECAG00000011827	SBNO2	73	67.347

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSECAG00000006127	SBNO1	100	98.492	ENSG00000139697	SBNO1	100	98.492	Homo_sapiens
ENSECAG00000006127	SBNO1	85	81.255	ENSAPOG00000003196	sbno1	98	81.341	Acanthochromis_polyacanthus
ENSECAG00000006127	SBNO1	100	98.496	ENSAMEG00000015151	SBNO1	100	98.496	Ailuropoda_melanoleuca
ENSECAG00000006127	SBNO1	99	75.270	ENSACIG00000008088	sbno1	99	75.270	Amphilophus_citrinellus
ENSECAG00000006127	SBNO1	99	75.815	ENSAOCG00000014859	sbno1	99	75.421	Amphiprion_ocellaris
ENSECAG00000006127	SBNO1	99	75.815	ENSAPEG00000006069	sbno1	99	75.421	Amphiprion_percula
ENSECAG00000006127	SBNO1	99	76.590	ENSATEG00000006667	sbno1	99	76.261	Anabas_testudineus
ENSECAG00000006127	SBNO1	100	92.319	ENSAPLG00000015674	SBNO1	100	92.324	Anas_platyrhynchos
ENSECAG00000006127	SBNO1	98	89.537	ENSACAG00000015441	SBNO1	86	89.470	Anolis_carolinensis
ENSECAG00000006127	SBNO1	100	98.134	ENSANAG00000029958	-	100	98.134	Aotus_nancymaae
ENSECAG00000006127	SBNO1	99	74.374	ENSACLG00000024913	sbno1	97	76.987	Astatotilapia_calliptera
ENSECAG00000006127	SBNO1	99	80.088	ENSAMXG00000019473	sbno1	99	79.801	Astyanax_mexicanus
ENSECAG00000006127	SBNO1	99	99.110	ENSBTAG00000020505	SBNO1	99	99.066	Bos_taurus
ENSECAG00000006127	SBNO1	100	98.277	ENSCJAG00000016599	SBNO1	100	98.277	Callithrix_jacchus
ENSECAG00000006127	SBNO1	100	98.710	ENSCAFG00000007503	SBNO1	100	98.710	Canis_familiaris
ENSECAG00000006127	SBNO1	100	97.990	ENSCAFG00020015363	SBNO1	100	97.990	Canis_lupus_dingo
ENSECAG00000006127	SBNO1	99	98.888	ENSCHIG00000008382	SBNO1	99	98.851	Capra_hircus
ENSECAG00000006127	SBNO1	100	98.851	ENSTSYG00000012749	SBNO1	100	98.851	Carlito_syrichta
ENSECAG00000006127	SBNO1	98	98.272	ENSCAPG00000000384	SBNO1	100	98.272	Cavia_aperea
ENSECAG00000006127	SBNO1	100	97.631	ENSCPOG00000008109	SBNO1	100	98.399	Cavia_porcellus
ENSECAG00000006127	SBNO1	100	93.902	ENSCCAG00000035316	SBNO1	100	93.902	Cebus_capucinus
ENSECAG00000006127	SBNO1	100	98.524	ENSCATG00000008239	SBNO1	99	98.524	Cercocebus_atys
ENSECAG00000006127	SBNO1	100	97.846	ENSCLAG00000008995	SBNO1	99	99.458	Chinchilla_lanigera
ENSECAG00000006127	SBNO1	85	98.964	ENSCSAG00000002064	SBNO1	100	98.964	Chlorocebus_sabaeus
ENSECAG00000006127	SBNO1	96	95.096	ENSCHOG00000008814	SBNO1	96	95.096	Choloepus_hoffmanni
ENSECAG00000006127	SBNO1	100	92.539	ENSCPBG00000025968	SBNO1	99	92.324	Chrysemys_picta_bellii
ENSECAG00000006127	SBNO1	100	93.047	ENSCANG00000042688	-	100	93.047	Colobus_angolensis_palliatus
ENSECAG00000006127	SBNO1	100	97.631	ENSCGRG00001017470	Sbno1	100	97.631	Cricetulus_griseus_chok1gshd
ENSECAG00000006127	SBNO1	100	97.631	ENSCGRG00000004756	Sbno1	100	97.631	Cricetulus_griseus_crigri
ENSECAG00000006127	SBNO1	99	75.308	ENSCSEG00000011919	sbno1	99	75.386	Cynoglossus_semilaevis
ENSECAG00000006127	SBNO1	99	76.360	ENSCVAG00000007038	sbno1	99	76.014	Cyprinodon_variegatus
ENSECAG00000006127	SBNO1	99	79.839	ENSDARG00000099080	sbno1	99	79.943	Danio_rerio
ENSECAG00000006127	SBNO1	100	97.868	ENSDNOG00000017147	SBNO1	99	98.362	Dasypus_novemcinctus
ENSECAG00000006127	SBNO1	100	83.977	ENSDORG00000015261	Sbno1	100	83.977	Dipodomys_ordii
ENSECAG00000006127	SBNO1	93	91.230	ENSETEG00000005620	SBNO1	93	90.993	Echinops_telfairi
ENSECAG00000006127	SBNO1	75	62.942	ENSEBUG00000013823	sbno1	93	62.442	Eptatretus_burgeri
ENSECAG00000006127	SBNO1	51	95.063	ENSEASG00005012595	-	92	95.063	Equus_asinus_asinus
ENSECAG00000006127	SBNO1	83	100.000	ENSEEUG00000003793	SBNO1	83	100.000	Erinaceus_europaeus
ENSECAG00000006127	SBNO1	98	79.364	ENSELUG00000002886	sbno1	99	77.989	Esox_lucius
ENSECAG00000006127	SBNO1	99	99.210	ENSFCAG00000015331	SBNO1	99	99.210	Felis_catus
ENSECAG00000006127	SBNO1	100	92.175	ENSFALG00000009273	SBNO1	100	92.253	Ficedula_albicollis
ENSECAG00000006127	SBNO1	99	96.442	ENSFDAG00000014232	SBNO1	99	96.193	Fukomys_damarensis
ENSECAG00000006127	SBNO1	99	76.638	ENSFHEG00000007360	sbno1	99	75.966	Fundulus_heteroclitus
ENSECAG00000006127	SBNO1	97	78.006	ENSGMOG00000018229	sbno1	99	78.664	Gadus_morhua
ENSECAG00000006127	SBNO1	88	93.019	ENSGALG00000003392	SBNO1	99	92.532	Gallus_gallus
ENSECAG00000006127	SBNO1	99	76.727	ENSGAFG00000003960	sbno1	99	76.050	Gambusia_affinis
ENSECAG00000006127	SBNO1	96	79.252	ENSGACG00000015633	sbno1	99	79.024	Gasterosteus_aculeatus
ENSECAG00000006127	SBNO1	100	91.679	ENSGAGG00000001065	SBNO1	99	94.756	Gopherus_agassizii
ENSECAG00000006127	SBNO1	100	98.349	ENSGGOG00000015000	SBNO1	100	98.349	Gorilla_gorilla
ENSECAG00000006127	SBNO1	99	68.710	ENSHBUG00000011910	sbno1	97	70.987	Haplochromis_burtoni
ENSECAG00000006127	SBNO1	100	97.918	ENSHGLG00000014165	-	99	99.458	Heterocephalus_glaber_female
ENSECAG00000006127	SBNO1	94	83.269	ENSHCOG00000003246	sbno1	95	85.178	Hippocampus_comes
ENSECAG00000006127	SBNO1	99	79.459	ENSIPUG00000015830	Sbno1	98	78.876	Ictalurus_punctatus
ENSECAG00000006127	SBNO1	100	98.708	ENSSTOG00000023221	SBNO1	100	98.708	Ictidomys_tridecemlineatus
ENSECAG00000006127	SBNO1	100	97.846	ENSJJAG00000001741	Sbno1	100	97.846	Jaculus_jaculus
ENSECAG00000006127	SBNO1	99	76.274	ENSKMAG00000009696	sbno1	99	75.843	Kryptolebias_marmoratus
ENSECAG00000006127	SBNO1	99	76.280	ENSLBEG00000007623	sbno1	99	75.891	Labrus_bergylta
ENSECAG00000006127	SBNO1	99	81.872	ENSLACG00000017227	SBNO1	99	84.130	Latimeria_chalumnae
ENSECAG00000006127	SBNO1	99	82.405	ENSLOCG00000005725	sbno1	97	82.018	Lepisosteus_oculatus
ENSECAG00000006127	SBNO1	100	97.559	ENSLAFG00000002135	SBNO1	100	97.559	Loxodonta_africana
ENSECAG00000006127	SBNO1	100	98.349	ENSMFAG00000031429	SBNO1	100	98.349	Macaca_fascicularis
ENSECAG00000006127	SBNO1	100	98.349	ENSMMUG00000011496	SBNO1	100	98.349	Macaca_mulatta
ENSECAG00000006127	SBNO1	100	96.626	ENSMLEG00000033260	SBNO1	99	99.096	Mandrillus_leucophaeus
ENSECAG00000006127	SBNO1	99	76.436	ENSMAMG00000005473	sbno1	99	76.110	Mastacembelus_armatus
ENSECAG00000006127	SBNO1	100	92.247	ENSMGAG00000003274	SBNO1	100	92.324	Meleagris_gallopavo
ENSECAG00000006127	SBNO1	50	93.562	ENSMAUG00000004834	-	100	93.562	Mesocricetus_auratus
ENSECAG00000006127	SBNO1	100	97.703	ENSMICG00000006573	-	100	97.703	Microcebus_murinus
ENSECAG00000006127	SBNO1	100	94.122	ENSMOCG00000009390	Sbno1	100	97.153	Microtus_ochrogaster
ENSECAG00000006127	SBNO1	99	71.952	ENSMMOG00000008691	sbno1	99	71.992	Mola_mola
ENSECAG00000006127	SBNO1	99	95.259	ENSMODG00000012470	SBNO1	98	95.259	Monodelphis_domestica
ENSECAG00000006127	SBNO1	99	76.046	ENSMALG00000001056	sbno1	99	75.611	Monopterus_albus
ENSECAG00000006127	SBNO1	99	97.628	MGP_CAROLIEiJ_G0027749	Sbno1	100	97.078	Mus_caroli
ENSECAG00000006127	SBNO1	99	98.147	ENSMUSG00000038095	Sbno1	100	97.840	Mus_musculus
ENSECAG00000006127	SBNO1	99	97.999	MGP_PahariEiJ_G0024329	Sbno1	100	97.713	Mus_pahari
ENSECAG00000006127	SBNO1	99	97.924	MGP_SPRETEiJ_G0028747	Sbno1	100	97.459	Mus_spretus
ENSECAG00000006127	SBNO1	100	98.995	ENSMPUG00000001658	SBNO1	100	98.995	Mustela_putorius_furo
ENSECAG00000006127	SBNO1	100	98.492	ENSMLUG00000017159	SBNO1	100	98.492	Myotis_lucifugus
ENSECAG00000006127	SBNO1	100	98.564	ENSNGAG00000012620	Sbno1	100	98.564	Nannospalax_galili
ENSECAG00000006127	SBNO1	99	74.464	ENSNBRG00000019189	sbno1	97	77.080	Neolamprologus_brichardi
ENSECAG00000006127	SBNO1	100	94.544	ENSNLEG00000001502	SBNO1	100	94.544	Nomascus_leucogenys
ENSECAG00000006127	SBNO1	62	84.810	ENSMEUG00000008768	-	93	88.608	Notamacropus_eugenii
ENSECAG00000006127	SBNO1	100	94.910	ENSOPRG00000011054	SBNO1	100	94.839	Ochotona_princeps
ENSECAG00000006127	SBNO1	100	97.775	ENSODEG00000009997	SBNO1	100	98.399	Octodon_degus
ENSECAG00000006127	SBNO1	99	76.180	ENSONIG00000015348	sbno1	99	75.806	Oreochromis_niloticus
ENSECAG00000006127	SBNO1	98	96.791	ENSOCUG00000002441	SBNO1	95	96.791	Oryctolagus_cuniculus
ENSECAG00000006127	SBNO1	99	75.762	ENSORLG00000001593	sbno1	99	75.145	Oryzias_latipes
ENSECAG00000006127	SBNO1	99	75.962	ENSORLG00020015216	sbno1	99	75.158	Oryzias_latipes_hni
ENSECAG00000006127	SBNO1	99	75.962	ENSORLG00015002726	sbno1	99	75.229	Oryzias_latipes_hsok
ENSECAG00000006127	SBNO1	99	75.997	ENSOMEG00000019313	sbno1	99	75.351	Oryzias_melastigma
ENSECAG00000006127	SBNO1	50	90.272	ENSOGAG00000010781	-	100	90.987	Otolemur_garnettii
ENSECAG00000006127	SBNO1	99	98.668	ENSOARG00000004404	SBNO1	99	98.637	Ovis_aries
ENSECAG00000006127	SBNO1	100	98.421	ENSPPAG00000024635	SBNO1	100	98.421	Pan_paniscus
ENSECAG00000006127	SBNO1	99	99.210	ENSPPRG00000022092	SBNO1	99	99.210	Panthera_pardus
ENSECAG00000006127	SBNO1	100	98.923	ENSPTIG00000017803	SBNO1	100	98.923	Panthera_tigris_altaica
ENSECAG00000006127	SBNO1	100	98.492	ENSPTRG00000005597	SBNO1	100	98.492	Pan_troglodytes
ENSECAG00000006127	SBNO1	100	98.349	ENSPANG00000011640	SBNO1	100	98.349	Papio_anubis
ENSECAG00000006127	SBNO1	99	80.987	ENSPKIG00000001441	sbno1	99	80.857	Paramormyrops_kingsleyae
ENSECAG00000006127	SBNO1	100	91.649	ENSPSIG00000009572	-	100	91.494	Pelodiscus_sinensis
ENSECAG00000006127	SBNO1	92	88.202	ENSPSIG00000009256	-	100	88.112	Pelodiscus_sinensis
ENSECAG00000006127	SBNO1	100	97.416	ENSPEMG00000016087	Sbno1	100	97.416	Peromyscus_maniculatus_bairdii
ENSECAG00000006127	SBNO1	99	94.811	ENSPCIG00000010985	SBNO1	99	94.760	Phascolarctos_cinereus
ENSECAG00000006127	SBNO1	99	77.035	ENSPFOG00000005069	sbno1	99	76.347	Poecilia_formosa
ENSECAG00000006127	SBNO1	99	76.890	ENSPLAG00000015015	sbno1	99	76.384	Poecilia_latipinna
ENSECAG00000006127	SBNO1	99	76.979	ENSPMEG00000021212	sbno1	99	76.294	Poecilia_mexicana
ENSECAG00000006127	SBNO1	99	76.616	ENSPREG00000017746	sbno1	99	75.944	Poecilia_reticulata
ENSECAG00000006127	SBNO1	100	98.062	ENSPPYG00000005084	SBNO1	100	98.062	Pongo_abelii
ENSECAG00000006127	SBNO1	89	93.425	ENSPCAG00000008634	SBNO1	88	93.398	Procavia_capensis
ENSECAG00000006127	SBNO1	100	98.780	ENSPCOG00000024277	SBNO1	100	98.780	Propithecus_coquereli
ENSECAG00000006127	SBNO1	87	99.603	ENSPVAG00000015304	SBNO1	87	99.603	Pteropus_vampyrus
ENSECAG00000006127	SBNO1	99	76.509	ENSPNYG00000004291	sbno1	99	75.913	Pundamilia_nyererei
ENSECAG00000006127	SBNO1	99	79.985	ENSPNAG00000015622	sbno1	99	79.418	Pygocentrus_nattereri
ENSECAG00000006127	SBNO1	99	97.924	ENSRNOG00000001064	Sbno1	99	97.861	Rattus_norvegicus
ENSECAG00000006127	SBNO1	100	98.492	ENSRROG00000034230	SBNO1	100	98.492	Rhinopithecus_roxellana
ENSECAG00000006127	SBNO1	99	93.229	ENSSBOG00000015422	SBNO1	100	93.229	Saimiri_boliviensis_boliviensis
ENSECAG00000006127	SBNO1	99	80.044	ENSSFOG00015019025	sbno1	99	80.286	Scleropages_formosus
ENSECAG00000006127	SBNO1	99	76.655	ENSSMAG00000013640	sbno1	99	76.392	Scophthalmus_maximus
ENSECAG00000006127	SBNO1	99	76.211	ENSSDUG00000023480	sbno1	99	75.753	Seriola_dumerili
ENSECAG00000006127	SBNO1	99	76.139	ENSSLDG00000007928	sbno1	99	75.683	Seriola_lalandi_dorsalis
ENSECAG00000006127	SBNO1	89	98.454	ENSSARG00000002594	SBNO1	89	98.382	Sorex_araneus
ENSECAG00000006127	SBNO1	98	91.465	ENSSPUG00000012640	SBNO1	100	89.383	Sphenodon_punctatus
ENSECAG00000006127	SBNO1	99	75.613	ENSSPAG00000016244	sbno1	99	75.245	Stegastes_partitus
ENSECAG00000006127	SBNO1	100	99.067	ENSSSCG00000009776	SBNO1	100	99.067	Sus_scrofa
ENSECAG00000006127	SBNO1	100	92.103	ENSTGUG00000005380	SBNO1	100	92.181	Taeniopygia_guttata
ENSECAG00000006127	SBNO1	99	76.270	ENSTRUG00000018490	sbno1	97	77.962	Takifugu_rubripes
ENSECAG00000006127	SBNO1	56	70.777	ENSTNIG00000013506	sbno1	99	70.880	Tetraodon_nigroviridis
ENSECAG00000006127	SBNO1	100	98.923	ENSUAMG00000019671	SBNO1	100	98.923	Ursus_americanus
ENSECAG00000006127	SBNO1	100	98.923	ENSUMAG00000004002	SBNO1	100	98.923	Ursus_maritimus
ENSECAG00000006127	SBNO1	95	97.826	ENSVPAG00000007024	SBNO1	95	97.826	Vicugna_pacos
ENSECAG00000006127	SBNO1	100	98.923	ENSVVUG00000027807	SBNO1	100	98.923	Vulpes_vulpes
ENSECAG00000006127	SBNO1	99	83.112	ENSXETG00000031930	SBNO1	99	82.416	Xenopus_tropicalis
ENSECAG00000006127	SBNO1	89	74.582	ENSXCOG00000011607	sbno1	95	75.180	Xiphophorus_couchianus
ENSECAG00000006127	SBNO1	99	76.834	ENSXMAG00000002140	sbno1	99	76.120	Xiphophorus_maculatus