EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSECAG00000006782 (Gene tree)
Gene ID: 100057519
Gene Symbol: -
Alias: -
Full Name: zinc finger and SCAN domain containing 5B
Gene Type: protein_coding
Species: Equus_caballus
Status: putative
Strand: Plus strand
Length: 5096 bases
Position: chr10:25621895-25626990
Accession: 100057519
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSECAP00000004912	zf-C2H2	PF00096.26	1.3e-18	1	3
ENSECAP00000004912	zf-C2H2	PF00096.26	1.3e-18	2	3
ENSECAP00000004912	zf-C2H2	PF00096.26	1.3e-18	3	3
ENSECAP00000004912	zf-met	PF12874.7	2e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSECAT00000006837	-	2622	-	ENSECAP00000004912	515 (aa)	XP_023507262	F6VVH4

Gene Model

Click here to download ENSECAG00000006782's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSECAG00000006782's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSECAG00000006782	-	83	49.184	ENSCHIG00000015589	-	100	49.184	Capra_hircus
ENSECAG00000006782	-	99	50.487	ENSCHIG00000014993	-	100	50.487	Capra_hircus
ENSECAG00000006782	-	99	50.097	ENSCHIG00000024202	-	100	50.097	Capra_hircus
ENSECAG00000006782	-	99	58.366	ENSDNOG00000010100	-	99	58.366	Dasypus_novemcinctus
ENSECAG00000006782	-	100	88.269	ENSEASG00005020480	-	100	88.269	Equus_asinus_asinus
ENSECAG00000006782	-	100	62.016	ENSFCAG00000041174	-	100	62.016	Felis_catus
ENSECAG00000006782	-	95	43.943	ENSMAUG00000015051	Zscan5b	96	43.943	Mesocricetus_auratus
ENSECAG00000006782	-	100	61.359	ENSMPUG00000006686	-	100	61.359	Mustela_putorius_furo
ENSECAG00000006782	-	99	49.222	ENSMLUG00000024124	-	99	49.222	Myotis_lucifugus
ENSECAG00000006782	-	70	59.016	ENSMLUG00000006448	-	97	59.016	Myotis_lucifugus
ENSECAG00000006782	-	92	50.518	ENSMLUG00000029894	-	99	50.518	Myotis_lucifugus
ENSECAG00000006782	-	99	52.529	ENSOGAG00000011347	-	99	52.529	Otolemur_garnettii
ENSECAG00000006782	-	98	50.198	ENSOGAG00000026429	-	99	50.988	Otolemur_garnettii
ENSECAG00000006782	-	100	62.403	ENSPTIG00000015051	-	100	62.403	Panthera_tigris_altaica
ENSECAG00000006782	-	100	63.127	ENSPVAG00000017654	-	99	63.127	Pteropus_vampyrus
ENSECAG00000006782	-	60	53.548	ENSVPAG00000002606	-	100	53.548	Vicugna_pacos