EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSECAG00000006997 (Gene tree)
Gene ID: 100056558
Gene Symbol: PRPF18
Alias: -
Full Name: Equus caballus pre-mRNA processing factor 18 (PRPF18)%2C mRNA.
Gene Type: protein_coding
Species: Equus_caballus
Status: putative
Strand: Minus strand
Length: 46576 bases
Position: chr29:22257051-22303626
Accession: NM_001309307
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSECAP00000035303	PRP4	PF08799.11	1.5e-13	1	1
ENSECAP00000024089	PRP4	PF08799.11	1.6e-13	1	1
ENSECAP00000005083	PRP4	PF08799.11	1.6e-13	1	1
ENSECAP00000035303	Prp18	PF02840.15	6.9e-63	1	1
ENSECAP00000024089	Prp18	PF02840.15	8.3e-63	1	1
ENSECAP00000005083	Prp18	PF02840.15	9.7e-62	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSECAT00000031780	-	2178	-	ENSECAP00000024089	351 (aa)	XP_023487655	UPI0004BDEA06
ENSECAT00000038650	-	2350	-	ENSECAP00000035303	342 (aa)	-	UPI00015608E7
ENSECAT00000007036	-	1359	-	ENSECAP00000005083	328 (aa)	-	F7DYU0

Gene Model

Click here to download ENSECAG00000006997's gene model file

Pathways

Pathway ID	Pathway Name	Source
ecb03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSECAG00000006997's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSECAG00000006997	PRPF18	100	99.708	ENSG00000165630	PRPF18	100	99.708	Homo_sapiens
ENSECAG00000006997	PRPF18	100	85.380	ENSAPOG00000024177	prpf18	100	85.380	Acanthochromis_polyacanthus
ENSECAG00000006997	PRPF18	100	99.708	ENSAMEG00000013591	-	100	99.708	Ailuropoda_melanoleuca
ENSECAG00000006997	PRPF18	100	84.795	ENSACIG00000001186	prpf18	100	84.795	Amphilophus_citrinellus
ENSECAG00000006997	PRPF18	98	85.373	ENSAOCG00000006572	prpf18	94	83.673	Amphiprion_ocellaris
ENSECAG00000006997	PRPF18	100	85.673	ENSAPEG00000004564	prpf18	100	85.673	Amphiprion_percula
ENSECAG00000006997	PRPF18	100	84.211	ENSATEG00000000303	prpf18	100	84.211	Anabas_testudineus
ENSECAG00000006997	PRPF18	99	91.176	ENSAPLG00000003387	-	99	91.176	Anas_platyrhynchos
ENSECAG00000006997	PRPF18	100	91.570	ENSACAG00000000818	-	100	91.570	Anolis_carolinensis
ENSECAG00000006997	PRPF18	100	99.145	ENSANAG00000037445	-	100	99.145	Aotus_nancymaae
ENSECAG00000006997	PRPF18	100	84.795	ENSACLG00000026296	prpf18	100	84.795	Astatotilapia_calliptera
ENSECAG00000006997	PRPF18	100	84.046	ENSAMXG00000012848	prpf18	100	84.046	Astyanax_mexicanus
ENSECAG00000006997	PRPF18	100	99.430	ENSBTAG00000017244	PRPF18	100	99.430	Bos_taurus
ENSECAG00000006997	PRPF18	98	38.506	WBGene00009320	F32B6.3	97	38.506	Caenorhabditis_elegans
ENSECAG00000006997	PRPF18	100	99.145	ENSCJAG00000009432	-	100	99.145	Callithrix_jacchus
ENSECAG00000006997	PRPF18	100	99.708	ENSCAFG00000004735	-	100	99.708	Canis_familiaris
ENSECAG00000006997	PRPF18	100	99.708	ENSCAFG00020007712	-	100	99.708	Canis_lupus_dingo
ENSECAG00000006997	PRPF18	100	99.430	ENSCHIG00000000499	-	100	99.430	Capra_hircus
ENSECAG00000006997	PRPF18	100	98.860	ENSTSYG00000003517	-	100	98.860	Carlito_syrichta
ENSECAG00000006997	PRPF18	100	99.708	ENSCPOG00000021069	-	100	99.708	Cavia_porcellus
ENSECAG00000006997	PRPF18	100	99.145	ENSCCAG00000036822	-	100	99.145	Cebus_capucinus
ENSECAG00000006997	PRPF18	100	88.596	ENSCATG00000016633	-	100	88.596	Cercocebus_atys
ENSECAG00000006997	PRPF18	100	98.830	ENSCLAG00000011770	-	100	98.830	Chinchilla_lanigera
ENSECAG00000006997	PRPF18	100	99.715	ENSCSAG00000013109	-	100	99.715	Chlorocebus_sabaeus
ENSECAG00000006997	PRPF18	100	89.045	ENSCPBG00000003100	-	100	89.607	Chrysemys_picta_bellii
ENSECAG00000006997	PRPF18	99	54.706	ENSCING00000020481	-	97	54.706	Ciona_intestinalis
ENSECAG00000006997	PRPF18	99	54.624	ENSCSAVG00000010546	-	99	54.651	Ciona_savignyi
ENSECAG00000006997	PRPF18	100	99.430	ENSCANG00000034900	-	100	99.430	Colobus_angolensis_palliatus
ENSECAG00000006997	PRPF18	100	99.123	ENSCGRG00001023665	Prpf18	100	99.123	Cricetulus_griseus_chok1gshd
ENSECAG00000006997	PRPF18	100	99.123	ENSCGRG00000014690	Prpf18	100	99.123	Cricetulus_griseus_crigri
ENSECAG00000006997	PRPF18	100	82.749	ENSCSEG00000005536	prpf18	100	82.622	Cynoglossus_semilaevis
ENSECAG00000006997	PRPF18	100	84.211	ENSCVAG00000012401	prpf18	100	84.211	Cyprinodon_variegatus
ENSECAG00000006997	PRPF18	100	84.795	ENSDARG00000058306	prpf18	100	84.795	Danio_rerio
ENSECAG00000006997	PRPF18	100	98.538	ENSDNOG00000035607	-	100	98.538	Dasypus_novemcinctus
ENSECAG00000006997	PRPF18	100	98.830	ENSDORG00000000858	Prpf18	100	98.830	Dipodomys_ordii
ENSECAG00000006997	PRPF18	99	51.622	FBgn0027784	Prp18	98	51.327	Drosophila_melanogaster
ENSECAG00000006997	PRPF18	100	87.427	ENSETEG00000015060	-	100	87.427	Echinops_telfairi
ENSECAG00000006997	PRPF18	100	66.859	ENSEBUG00000016502	prpf18	99	65.994	Eptatretus_burgeri
ENSECAG00000006997	PRPF18	100	100.000	ENSEASG00005019373	-	100	100.000	Equus_asinus_asinus
ENSECAG00000006997	PRPF18	92	63.291	ENSEEUG00000001171	-	100	63.291	Erinaceus_europaeus
ENSECAG00000006997	PRPF18	100	82.216	ENSELUG00000022190	prpf18	100	82.216	Esox_lucius
ENSECAG00000006997	PRPF18	100	99.430	ENSFCAG00000004436	-	100	99.430	Felis_catus
ENSECAG00000006997	PRPF18	93	91.077	ENSFALG00000001912	-	97	91.077	Ficedula_albicollis
ENSECAG00000006997	PRPF18	99	64.348	ENSFDAG00000010713	-	97	64.348	Fukomys_damarensis
ENSECAG00000006997	PRPF18	94	99.062	ENSFDAG00000014026	-	100	99.062	Fukomys_damarensis
ENSECAG00000006997	PRPF18	80	89.011	ENSFHEG00000020125	prpf18	98	89.139	Fundulus_heteroclitus
ENSECAG00000006997	PRPF18	99	79.765	ENSGMOG00000012210	prpf18	99	79.765	Gadus_morhua
ENSECAG00000006997	PRPF18	100	92.105	ENSGALG00000043593	-	100	92.105	Gallus_gallus
ENSECAG00000006997	PRPF18	100	83.041	ENSGAFG00000006034	prpf18	100	83.041	Gambusia_affinis
ENSECAG00000006997	PRPF18	100	81.579	ENSGACG00000012232	prpf18	100	81.579	Gasterosteus_aculeatus
ENSECAG00000006997	PRPF18	100	92.398	ENSGAGG00000016878	-	100	92.398	Gopherus_agassizii
ENSECAG00000006997	PRPF18	93	99.692	ENSGGOG00000025188	-	96	99.692	Gorilla_gorilla
ENSECAG00000006997	PRPF18	100	84.795	ENSHBUG00000010264	prpf18	100	84.795	Haplochromis_burtoni
ENSECAG00000006997	PRPF18	100	99.123	ENSHGLG00000018534	PRPF18	100	99.123	Heterocephalus_glaber_female
ENSECAG00000006997	PRPF18	94	99.375	ENSHGLG00100012161	-	98	99.375	Heterocephalus_glaber_male
ENSECAG00000006997	PRPF18	100	84.211	ENSHCOG00000015987	prpf18	100	84.211	Hippocampus_comes
ENSECAG00000006997	PRPF18	100	81.870	ENSIPUG00000007432	prpf18	100	82.720	Ictalurus_punctatus
ENSECAG00000006997	PRPF18	100	97.953	ENSSTOG00000008735	-	100	97.953	Ictidomys_tridecemlineatus
ENSECAG00000006997	PRPF18	100	75.375	ENSJJAG00000015191	-	100	75.375	Jaculus_jaculus
ENSECAG00000006997	PRPF18	100	99.708	ENSJJAG00000024041	-	100	99.708	Jaculus_jaculus
ENSECAG00000006997	PRPF18	100	83.041	ENSKMAG00000012124	prpf18	100	83.041	Kryptolebias_marmoratus
ENSECAG00000006997	PRPF18	99	83.432	ENSLBEG00000028466	prpf18	99	83.432	Labrus_bergylta
ENSECAG00000006997	PRPF18	100	86.550	ENSLACG00000009885	prpf18	100	86.550	Latimeria_chalumnae
ENSECAG00000006997	PRPF18	100	90.351	ENSLOCG00000016736	prpf18	100	90.351	Lepisosteus_oculatus
ENSECAG00000006997	PRPF18	100	99.708	ENSLAFG00000007753	-	100	99.708	Loxodonta_africana
ENSECAG00000006997	PRPF18	100	99.715	ENSMFAG00000000540	-	100	99.715	Macaca_fascicularis
ENSECAG00000006997	PRPF18	100	99.715	ENSMMUG00000015071	PRPF18	100	99.715	Macaca_mulatta
ENSECAG00000006997	PRPF18	100	99.715	ENSMNEG00000024679	-	100	99.715	Macaca_nemestrina
ENSECAG00000006997	PRPF18	100	84.503	ENSMLEG00000031715	-	100	84.503	Mandrillus_leucophaeus
ENSECAG00000006997	PRPF18	100	83.333	ENSMAMG00000006610	prpf18	100	83.333	Mastacembelus_armatus
ENSECAG00000006997	PRPF18	100	84.795	ENSMZEG00005019392	prpf18	100	84.795	Maylandia_zebra
ENSECAG00000006997	PRPF18	100	92.105	ENSMGAG00000005023	-	100	92.105	Meleagris_gallopavo
ENSECAG00000006997	PRPF18	100	99.430	ENSMICG00000006572	-	100	99.430	Microcebus_murinus
ENSECAG00000006997	PRPF18	100	99.708	ENSMOCG00000021468	Prpf18	100	99.708	Microtus_ochrogaster
ENSECAG00000006997	PRPF18	100	83.041	ENSMMOG00000013012	prpf18	100	83.041	Mola_mola
ENSECAG00000006997	PRPF18	100	85.673	ENSMODG00000024043	-	100	85.673	Monodelphis_domestica
ENSECAG00000006997	PRPF18	96	92.899	ENSMODG00000016902	-	92	92.899	Monodelphis_domestica
ENSECAG00000006997	PRPF18	100	78.000	ENSMALG00000005486	prpf18	100	78.286	Monopterus_albus
ENSECAG00000006997	PRPF18	100	99.123	MGP_CAROLIEiJ_G0023143	Prpf18	100	99.123	Mus_caroli
ENSECAG00000006997	PRPF18	100	98.830	ENSMUSG00000039449	Prpf18	100	98.830	Mus_musculus
ENSECAG00000006997	PRPF18	100	99.415	MGP_PahariEiJ_G0019203	Prpf18	100	99.415	Mus_pahari
ENSECAG00000006997	PRPF18	100	98.538	MGP_SPRETEiJ_G0024061	Prpf18	100	98.630	Mus_spretus
ENSECAG00000006997	PRPF18	100	99.415	ENSMPUG00000000938	-	100	99.415	Mustela_putorius_furo
ENSECAG00000006997	PRPF18	100	99.415	ENSMLUG00000009200	-	100	99.415	Myotis_lucifugus
ENSECAG00000006997	PRPF18	100	99.123	ENSNGAG00000012500	-	100	99.123	Nannospalax_galili
ENSECAG00000006997	PRPF18	67	91.739	ENSNGAG00000023550	-	82	91.739	Nannospalax_galili
ENSECAG00000006997	PRPF18	100	84.795	ENSNBRG00000001778	prpf18	100	84.795	Neolamprologus_brichardi
ENSECAG00000006997	PRPF18	100	99.715	ENSNLEG00000012186	-	100	99.715	Nomascus_leucogenys
ENSECAG00000006997	PRPF18	100	65.205	ENSMEUG00000005032	-	100	65.205	Notamacropus_eugenii
ENSECAG00000006997	PRPF18	77	81.132	ENSOPRG00000002153	-	100	81.132	Ochotona_princeps
ENSECAG00000006997	PRPF18	100	98.830	ENSODEG00000003770	-	100	98.830	Octodon_degus
ENSECAG00000006997	PRPF18	98	84.179	ENSONIG00000014854	prpf18	96	84.179	Oreochromis_niloticus
ENSECAG00000006997	PRPF18	100	94.444	ENSOANG00000015404	-	100	94.444	Ornithorhynchus_anatinus
ENSECAG00000006997	PRPF18	100	99.415	ENSOCUG00000027756	-	100	95.322	Oryctolagus_cuniculus
ENSECAG00000006997	PRPF18	100	82.621	ENSORLG00000010293	prpf18	100	82.621	Oryzias_latipes
ENSECAG00000006997	PRPF18	100	84.211	ENSORLG00020001530	prpf18	100	84.211	Oryzias_latipes_hni
ENSECAG00000006997	PRPF18	100	83.918	ENSORLG00015013705	prpf18	100	83.918	Oryzias_latipes_hsok
ENSECAG00000006997	PRPF18	100	85.380	ENSOMEG00000009167	prpf18	100	85.380	Oryzias_melastigma
ENSECAG00000006997	PRPF18	100	98.538	ENSOGAG00000007294	-	100	98.538	Otolemur_garnettii
ENSECAG00000006997	PRPF18	100	99.430	ENSOARG00000006243	-	100	99.430	Ovis_aries
ENSECAG00000006997	PRPF18	100	99.715	ENSPPAG00000041959	-	100	99.715	Pan_paniscus
ENSECAG00000006997	PRPF18	100	99.415	ENSPPRG00000000107	-	100	99.415	Panthera_pardus
ENSECAG00000006997	PRPF18	100	99.123	ENSPTIG00000021094	-	100	99.123	Panthera_tigris_altaica
ENSECAG00000006997	PRPF18	100	99.715	ENSPTRG00000002306	PRPF18	100	99.715	Pan_troglodytes
ENSECAG00000006997	PRPF18	100	99.430	ENSPANG00000023346	-	100	99.430	Papio_anubis
ENSECAG00000006997	PRPF18	86	98.113	ENSPKIG00000014128	prpf18	96	82.906	Paramormyrops_kingsleyae
ENSECAG00000006997	PRPF18	100	92.690	ENSPSIG00000016064	-	100	92.690	Pelodiscus_sinensis
ENSECAG00000006997	PRPF18	100	80.480	ENSPMGG00000016486	prpf18	100	80.480	Periophthalmus_magnuspinnatus
ENSECAG00000006997	PRPF18	100	99.415	ENSPEMG00000013704	Prpf18	100	99.415	Peromyscus_maniculatus_bairdii
ENSECAG00000006997	PRPF18	100	74.566	ENSPMAG00000000204	prpf18	100	74.566	Petromyzon_marinus
ENSECAG00000006997	PRPF18	93	96.308	ENSPCIG00000012963	-	99	96.519	Phascolarctos_cinereus
ENSECAG00000006997	PRPF18	100	81.766	ENSPFOG00000017611	prpf18	100	81.766	Poecilia_formosa
ENSECAG00000006997	PRPF18	100	83.333	ENSPLAG00000000369	prpf18	100	83.333	Poecilia_latipinna
ENSECAG00000006997	PRPF18	100	83.333	ENSPMEG00000005183	prpf18	100	83.333	Poecilia_mexicana
ENSECAG00000006997	PRPF18	100	82.749	ENSPREG00000015232	prpf18	100	82.749	Poecilia_reticulata
ENSECAG00000006997	PRPF18	100	99.415	ENSPPYG00000002101	PRPF18	100	99.415	Pongo_abelii
ENSECAG00000006997	PRPF18	100	80.702	ENSPCAG00000010833	-	100	80.702	Procavia_capensis
ENSECAG00000006997	PRPF18	100	92.105	ENSPCOG00000013057	-	100	92.105	Propithecus_coquereli
ENSECAG00000006997	PRPF18	100	61.696	ENSPVAG00000002947	-	100	61.696	Pteropus_vampyrus
ENSECAG00000006997	PRPF18	100	84.795	ENSPNYG00000003554	prpf18	100	84.795	Pundamilia_nyererei
ENSECAG00000006997	PRPF18	100	85.185	ENSPNAG00000023151	prpf18	100	85.185	Pygocentrus_nattereri
ENSECAG00000006997	PRPF18	100	98.538	ENSRNOG00000018396	Prpf18	100	98.538	Rattus_norvegicus
ENSECAG00000006997	PRPF18	100	99.145	ENSRBIG00000028028	-	100	99.145	Rhinopithecus_bieti
ENSECAG00000006997	PRPF18	100	99.430	ENSRROG00000040695	-	100	99.430	Rhinopithecus_roxellana
ENSECAG00000006997	PRPF18	100	99.145	ENSSBOG00000034482	-	100	99.145	Saimiri_boliviensis_boliviensis
ENSECAG00000006997	PRPF18	100	77.193	ENSSHAG00000009669	-	100	77.193	Sarcophilus_harrisii
ENSECAG00000006997	PRPF18	100	96.491	ENSSHAG00000016463	-	100	96.491	Sarcophilus_harrisii
ENSECAG00000006997	PRPF18	77	44.528	ENSSFOG00015021154	-	89	51.905	Scleropages_formosus
ENSECAG00000006997	PRPF18	98	83.188	ENSSFOG00015022118	prpf18	100	80.480	Scleropages_formosus
ENSECAG00000006997	PRPF18	100	83.041	ENSSMAG00000005308	prpf18	100	83.041	Scophthalmus_maximus
ENSECAG00000006997	PRPF18	100	85.088	ENSSDUG00000015428	prpf18	100	85.088	Seriola_dumerili
ENSECAG00000006997	PRPF18	100	85.088	ENSSLDG00000023989	prpf18	100	85.088	Seriola_lalandi_dorsalis
ENSECAG00000006997	PRPF18	100	69.006	ENSSARG00000005307	-	100	69.006	Sorex_araneus
ENSECAG00000006997	PRPF18	100	92.398	ENSSPUG00000002619	-	100	92.398	Sphenodon_punctatus
ENSECAG00000006997	PRPF18	100	84.503	ENSSPAG00000019502	prpf18	100	84.503	Stegastes_partitus
ENSECAG00000006997	PRPF18	100	99.715	ENSSSCG00000026354	-	100	99.715	Sus_scrofa
ENSECAG00000006997	PRPF18	100	92.105	ENSTGUG00000002286	-	100	92.105	Taeniopygia_guttata
ENSECAG00000006997	PRPF18	100	82.164	ENSTRUG00000011278	prpf18	100	82.164	Takifugu_rubripes
ENSECAG00000006997	PRPF18	100	81.871	ENSTNIG00000000911	prpf18	100	81.871	Tetraodon_nigroviridis
ENSECAG00000006997	PRPF18	80	100.000	ENSTBEG00000013011	-	79	100.000	Tupaia_belangeri
ENSECAG00000006997	PRPF18	100	99.415	ENSTTRG00000011117	PRPF18	100	99.415	Tursiops_truncatus
ENSECAG00000006997	PRPF18	95	96.615	ENSUAMG00000001815	-	94	96.615	Ursus_americanus
ENSECAG00000006997	PRPF18	100	94.737	ENSUMAG00000012329	-	100	94.737	Ursus_maritimus
ENSECAG00000006997	PRPF18	100	94.152	ENSVPAG00000011486	-	100	94.152	Vicugna_pacos
ENSECAG00000006997	PRPF18	100	99.715	ENSVVUG00000005453	-	100	99.715	Vulpes_vulpes
ENSECAG00000006997	PRPF18	100	80.870	ENSXETG00000024057	prpf18	100	80.870	Xenopus_tropicalis
ENSECAG00000006997	PRPF18	100	82.558	ENSXCOG00000020414	prpf18	100	82.558	Xiphophorus_couchianus
ENSECAG00000006997	PRPF18	100	83.041	ENSXMAG00000004713	prpf18	91	83.041	Xiphophorus_maculatus