EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSECAG00000007022 (Gene tree)
Gene ID: 100073297
Gene Symbol: PTCD2
Alias: -
Full Name: pentatricopeptide repeat domain 2
Gene Type: protein_coding
Species: Equus_caballus
Status: putative
Strand: Minus strand
Length: 30738 bases
Position: chr14:92423708-92454445
Accession: 55484
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSECAP00000005255	MRP-S27	PF10037.9	2.2e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSECAT00000037357	-	1509	-	ENSECAP00000041262	198 (aa)	-	-
ENSECAT00000007244	-	1167	-	ENSECAP00000005255	388 (aa)	-	F7CM17

Gene Model

Click here to download ENSECAG00000007022's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSECAG00000007022's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSECAG00000007022	PTCD2	99	79.688	ENSG00000049883	PTCD2	100	81.773	Homo_sapiens
ENSECAG00000007022	PTCD2	94	47.253	ENSAPOG00000020682	ptcd2	93	47.253	Acanthochromis_polyacanthus
ENSECAG00000007022	PTCD2	99	79.124	ENSAMEG00000007194	PTCD2	100	79.124	Ailuropoda_melanoleuca
ENSECAG00000007022	PTCD2	89	42.693	ENSACIG00000002053	ptcd2	100	42.693	Amphilophus_citrinellus
ENSECAG00000007022	PTCD2	94	46.978	ENSAOCG00000006616	ptcd2	92	46.978	Amphiprion_ocellaris
ENSECAG00000007022	PTCD2	94	46.978	ENSAPEG00000022926	ptcd2	92	46.978	Amphiprion_percula
ENSECAG00000007022	PTCD2	100	56.010	ENSACAG00000009747	PTCD2	100	56.010	Anolis_carolinensis
ENSECAG00000007022	PTCD2	100	79.949	ENSANAG00000029353	PTCD2	100	79.949	Aotus_nancymaae
ENSECAG00000007022	PTCD2	90	45.584	ENSACLG00000027742	ptcd2	90	45.584	Astatotilapia_calliptera
ENSECAG00000007022	PTCD2	85	43.807	ENSAMXG00000029404	ptcd2	88	43.807	Astyanax_mexicanus
ENSECAG00000007022	PTCD2	98	81.771	ENSBTAG00000014675	PTCD2	100	81.771	Bos_taurus
ENSECAG00000007022	PTCD2	99	79.688	ENSCJAG00000016364	PTCD2	99	79.688	Callithrix_jacchus
ENSECAG00000007022	PTCD2	99	79.167	ENSCAFG00000007982	PTCD2	90	79.167	Canis_familiaris
ENSECAG00000007022	PTCD2	89	81.503	ENSCAFG00020019147	PTCD2	97	81.503	Canis_lupus_dingo
ENSECAG00000007022	PTCD2	98	82.812	ENSCHIG00000017118	PTCD2	100	82.812	Capra_hircus
ENSECAG00000007022	PTCD2	98	73.368	ENSCPOG00000040168	PTCD2	100	73.368	Cavia_porcellus
ENSECAG00000007022	PTCD2	81	73.802	ENSCCAG00000021996	-	98	72.327	Cebus_capucinus
ENSECAG00000007022	PTCD2	100	77.835	ENSCCAG00000029389	-	100	77.835	Cebus_capucinus
ENSECAG00000007022	PTCD2	98	79.634	ENSCATG00000019069	PTCD2	100	79.634	Cercocebus_atys
ENSECAG00000007022	PTCD2	98	73.506	ENSCLAG00000000072	PTCD2	100	73.506	Chinchilla_lanigera
ENSECAG00000007022	PTCD2	98	80.157	ENSCSAG00000015623	PTCD2	100	80.157	Chlorocebus_sabaeus
ENSECAG00000007022	PTCD2	89	59.195	ENSCHOG00000010634	PTCD2	100	59.195	Choloepus_hoffmanni
ENSECAG00000007022	PTCD2	95	55.858	ENSCPBG00000000216	PTCD2	94	55.858	Chrysemys_picta_bellii
ENSECAG00000007022	PTCD2	100	79.177	ENSCANG00000035636	PTCD2	100	79.177	Colobus_angolensis_palliatus
ENSECAG00000007022	PTCD2	95	74.255	ENSCGRG00001015289	Ptcd2	81	74.255	Cricetulus_griseus_chok1gshd
ENSECAG00000007022	PTCD2	95	74.255	ENSCGRG00000006193	Ptcd2	81	74.255	Cricetulus_griseus_crigri
ENSECAG00000007022	PTCD2	90	45.115	ENSCVAG00000001285	ptcd2	89	45.115	Cyprinodon_variegatus
ENSECAG00000007022	PTCD2	97	44.855	ENSDARG00000035391	ptcd2	98	44.855	Danio_rerio
ENSECAG00000007022	PTCD2	98	76.240	ENSDNOG00000008719	PTCD2	100	76.240	Dasypus_novemcinctus
ENSECAG00000007022	PTCD2	98	75.969	ENSDORG00000004921	Ptcd2	100	75.969	Dipodomys_ordii
ENSECAG00000007022	PTCD2	99	70.130	ENSETEG00000016542	PTCD2	99	70.130	Echinops_telfairi
ENSECAG00000007022	PTCD2	98	98.953	ENSEASG00005018038	PTCD2	100	98.953	Equus_asinus_asinus
ENSECAG00000007022	PTCD2	99	75.325	ENSEEUG00000014031	PTCD2	99	75.325	Erinaceus_europaeus
ENSECAG00000007022	PTCD2	91	51.130	ENSELUG00000003584	ptcd2	92	51.130	Esox_lucius
ENSECAG00000007022	PTCD2	99	74.479	ENSFCAG00000045432	PTCD2	83	74.479	Felis_catus
ENSECAG00000007022	PTCD2	84	50.765	ENSFALG00000010299	PTCD2	99	50.765	Ficedula_albicollis
ENSECAG00000007022	PTCD2	98	74.935	ENSFDAG00000018461	PTCD2	100	74.935	Fukomys_damarensis
ENSECAG00000007022	PTCD2	90	51.282	ENSGMOG00000003637	ptcd2	91	51.282	Gadus_morhua
ENSECAG00000007022	PTCD2	91	49.718	ENSGALG00000038260	PTCD2	93	49.718	Gallus_gallus
ENSECAG00000007022	PTCD2	100	57.143	ENSGAGG00000021952	PTCD2	100	57.143	Gopherus_agassizii
ENSECAG00000007022	PTCD2	99	79.427	ENSGGOG00000010695	PTCD2	99	79.427	Gorilla_gorilla
ENSECAG00000007022	PTCD2	90	45.584	ENSHBUG00000009191	ptcd2	90	45.584	Haplochromis_burtoni
ENSECAG00000007022	PTCD2	96	77.089	ENSHGLG00000001234	PTCD2	97	77.089	Heterocephalus_glaber_female
ENSECAG00000007022	PTCD2	96	77.089	ENSHGLG00100015419	PTCD2	97	77.089	Heterocephalus_glaber_male
ENSECAG00000007022	PTCD2	91	47.191	ENSHCOG00000001703	ptcd2	92	47.191	Hippocampus_comes
ENSECAG00000007022	PTCD2	84	45.260	ENSIPUG00000006080	ptcd2	91	45.559	Ictalurus_punctatus
ENSECAG00000007022	PTCD2	98	78.796	ENSSTOG00000006596	PTCD2	99	78.796	Ictidomys_tridecemlineatus
ENSECAG00000007022	PTCD2	98	78.068	ENSJJAG00000024388	Ptcd2	100	78.068	Jaculus_jaculus
ENSECAG00000007022	PTCD2	98	41.927	ENSKMAG00000009329	ptcd2	100	41.927	Kryptolebias_marmoratus
ENSECAG00000007022	PTCD2	99	45.103	ENSLBEG00000024871	ptcd2	98	45.103	Labrus_bergylta
ENSECAG00000007022	PTCD2	98	53.525	ENSLOCG00000011122	ptcd2	99	53.525	Lepisosteus_oculatus
ENSECAG00000007022	PTCD2	80	76.527	ENSLAFG00000004115	PTCD2	100	76.527	Loxodonta_africana
ENSECAG00000007022	PTCD2	100	78.920	ENSMFAG00000031516	PTCD2	100	78.920	Macaca_fascicularis
ENSECAG00000007022	PTCD2	98	79.373	ENSMNEG00000007537	PTCD2	100	79.373	Macaca_nemestrina
ENSECAG00000007022	PTCD2	100	79.177	ENSMLEG00000031093	PTCD2	100	79.177	Mandrillus_leucophaeus
ENSECAG00000007022	PTCD2	97	46.438	ENSMAMG00000018529	ptcd2	99	46.438	Mastacembelus_armatus
ENSECAG00000007022	PTCD2	90	45.584	ENSMZEG00005003625	ptcd2	90	45.584	Maylandia_zebra
ENSECAG00000007022	PTCD2	90	50.862	ENSMGAG00000005033	PTCD2	100	50.862	Meleagris_gallopavo
ENSECAG00000007022	PTCD2	98	58.901	ENSMAUG00000020253	Ptcd2	100	58.901	Mesocricetus_auratus
ENSECAG00000007022	PTCD2	99	78.385	ENSMICG00000004535	PTCD2	99	78.385	Microcebus_murinus
ENSECAG00000007022	PTCD2	98	76.440	ENSMOCG00000019985	Ptcd2	100	76.440	Microtus_ochrogaster
ENSECAG00000007022	PTCD2	95	59.128	ENSMODG00000001695	PTCD2	96	59.128	Monodelphis_domestica
ENSECAG00000007022	PTCD2	91	48.732	ENSMALG00000022372	ptcd2	93	48.732	Monopterus_albus
ENSECAG00000007022	PTCD2	98	71.990	MGP_CAROLIEiJ_G0018829	Ptcd2	100	71.990	Mus_caroli
ENSECAG00000007022	PTCD2	98	71.204	ENSMUSG00000021650	Ptcd2	100	71.204	Mus_musculus
ENSECAG00000007022	PTCD2	98	75.131	MGP_PahariEiJ_G0015904	Ptcd2	100	75.131	Mus_pahari
ENSECAG00000007022	PTCD2	98	71.728	MGP_SPRETEiJ_G0019711	Ptcd2	100	71.728	Mus_spretus
ENSECAG00000007022	PTCD2	96	83.065	ENSMPUG00000014401	PTCD2	97	83.065	Mustela_putorius_furo
ENSECAG00000007022	PTCD2	99	79.793	ENSMLUG00000007374	PTCD2	99	79.793	Myotis_lucifugus
ENSECAG00000007022	PTCD2	96	74.933	ENSNGAG00000005027	Ptcd2	97	74.933	Nannospalax_galili
ENSECAG00000007022	PTCD2	85	45.921	ENSNBRG00000000092	-	100	45.921	Neolamprologus_brichardi
ENSECAG00000007022	PTCD2	90	45.869	ENSNBRG00000008174	ptcd2	92	45.869	Neolamprologus_brichardi
ENSECAG00000007022	PTCD2	99	78.906	ENSNLEG00000004516	PTCD2	99	78.906	Nomascus_leucogenys
ENSECAG00000007022	PTCD2	98	47.120	ENSMEUG00000014012	-	99	47.120	Notamacropus_eugenii
ENSECAG00000007022	PTCD2	98	73.629	ENSOPRG00000007290	PTCD2	99	73.629	Ochotona_princeps
ENSECAG00000007022	PTCD2	98	76.501	ENSODEG00000016417	PTCD2	100	76.501	Octodon_degus
ENSECAG00000007022	PTCD2	75	47.603	ENSONIG00000011269	ptcd2	85	47.603	Oreochromis_niloticus
ENSECAG00000007022	PTCD2	94	81.044	ENSOCUG00000007970	PTCD2	97	80.914	Oryctolagus_cuniculus
ENSECAG00000007022	PTCD2	99	44.301	ENSORLG00000003851	ptcd2	99	44.301	Oryzias_latipes
ENSECAG00000007022	PTCD2	99	44.010	ENSORLG00020009823	ptcd2	99	44.010	Oryzias_latipes_hni
ENSECAG00000007022	PTCD2	90	45.714	ENSORLG00015016777	ptcd2	99	45.714	Oryzias_latipes_hsok
ENSECAG00000007022	PTCD2	89	45.665	ENSOMEG00000012396	ptcd2	84	45.665	Oryzias_melastigma
ENSECAG00000007022	PTCD2	99	73.177	ENSOGAG00000008390	PTCD2	99	73.177	Otolemur_garnettii
ENSECAG00000007022	PTCD2	99	82.124	ENSOARG00000005087	PTCD2	99	82.124	Ovis_aries
ENSECAG00000007022	PTCD2	99	79.427	ENSPPAG00000028480	PTCD2	99	79.427	Pan_paniscus
ENSECAG00000007022	PTCD2	99	78.906	ENSPTRG00000016968	PTCD2	99	78.906	Pan_troglodytes
ENSECAG00000007022	PTCD2	89	83.188	ENSPANG00000006611	PTCD2	89	83.188	Papio_anubis
ENSECAG00000007022	PTCD2	91	47.458	ENSPKIG00000019896	ptcd2	92	47.458	Paramormyrops_kingsleyae
ENSECAG00000007022	PTCD2	82	60.883	ENSPSIG00000014559	PTCD2	98	60.883	Pelodiscus_sinensis
ENSECAG00000007022	PTCD2	98	74.479	ENSPEMG00000000884	Ptcd2	100	74.479	Peromyscus_maniculatus_bairdii
ENSECAG00000007022	PTCD2	98	58.854	ENSPCIG00000029047	PTCD2	100	58.854	Phascolarctos_cinereus
ENSECAG00000007022	PTCD2	85	45.152	ENSPLAG00000010456	ptcd2	91	45.014	Poecilia_latipinna
ENSECAG00000007022	PTCD2	90	45.115	ENSPREG00000021797	ptcd2	88	45.115	Poecilia_reticulata
ENSECAG00000007022	PTCD2	99	69.531	ENSPPYG00000015543	PTCD2	99	69.531	Pongo_abelii
ENSECAG00000007022	PTCD2	80	66.667	ENSPCAG00000006806	PTCD2	99	66.667	Procavia_capensis
ENSECAG00000007022	PTCD2	99	79.481	ENSPVAG00000010935	PTCD2	99	79.481	Pteropus_vampyrus
ENSECAG00000007022	PTCD2	90	45.584	ENSPNYG00000003122	ptcd2	90	45.584	Pundamilia_nyererei
ENSECAG00000007022	PTCD2	92	48.895	ENSPNAG00000021490	ptcd2	94	49.171	Pygocentrus_nattereri
ENSECAG00000007022	PTCD2	98	73.766	ENSRNOG00000028403	Ptcd2	100	73.766	Rattus_norvegicus
ENSECAG00000007022	PTCD2	100	74.550	ENSRBIG00000032929	PTCD2	100	74.550	Rhinopithecus_bieti
ENSECAG00000007022	PTCD2	98	79.634	ENSRROG00000000080	PTCD2	100	79.634	Rhinopithecus_roxellana
ENSECAG00000007022	PTCD2	98	78.329	ENSSBOG00000018911	PTCD2	100	78.329	Saimiri_boliviensis_boliviensis
ENSECAG00000007022	PTCD2	98	58.421	ENSSHAG00000003833	PTCD2	98	58.421	Sarcophilus_harrisii
ENSECAG00000007022	PTCD2	93	45.833	ENSSFOG00015015415	ptcd2	93	45.833	Scleropages_formosus
ENSECAG00000007022	PTCD2	100	42.526	ENSSMAG00000010350	ptcd2	99	42.526	Scophthalmus_maximus
ENSECAG00000007022	PTCD2	89	48.415	ENSSDUG00000008142	ptcd2	87	48.415	Seriola_dumerili
ENSECAG00000007022	PTCD2	89	48.415	ENSSLDG00000015284	ptcd2	91	48.415	Seriola_lalandi_dorsalis
ENSECAG00000007022	PTCD2	80	66.987	ENSSARG00000004983	PTCD2	99	66.987	Sorex_araneus
ENSECAG00000007022	PTCD2	98	51.175	ENSSPUG00000000176	PTCD2	96	51.175	Sphenodon_punctatus
ENSECAG00000007022	PTCD2	99	44.560	ENSSPAG00000008591	ptcd2	99	44.560	Stegastes_partitus
ENSECAG00000007022	PTCD2	99	84.073	ENSSSCG00000016975	PTCD2	90	84.073	Sus_scrofa
ENSECAG00000007022	PTCD2	89	50.289	ENSTGUG00000005705	PTCD2	99	50.289	Taeniopygia_guttata
ENSECAG00000007022	PTCD2	99	75.781	ENSTBEG00000016559	PTCD2	99	75.781	Tupaia_belangeri
ENSECAG00000007022	PTCD2	99	82.902	ENSTTRG00000011851	PTCD2	99	82.902	Tursiops_truncatus
ENSECAG00000007022	PTCD2	99	79.124	ENSUAMG00000007583	PTCD2	91	79.124	Ursus_americanus
ENSECAG00000007022	PTCD2	96	80.914	ENSUMAG00000007666	PTCD2	97	80.914	Ursus_maritimus
ENSECAG00000007022	PTCD2	99	82.338	ENSVPAG00000009597	PTCD2	99	82.338	Vicugna_pacos
ENSECAG00000007022	PTCD2	98	79.634	ENSVVUG00000007299	-	100	79.634	Vulpes_vulpes
ENSECAG00000007022	PTCD2	95	51.087	ENSXETG00000031652	PTCD2	95	51.087	Xenopus_tropicalis
ENSECAG00000007022	PTCD2	85	45.455	ENSXMAG00000005940	ptcd2	83	45.014	Xiphophorus_maculatus