EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSECAG00000007072 (Gene tree)
Gene ID: 100050303
Gene Symbol: PRPF4
Alias: -
Full Name: pre-mRNA processing factor 4
Gene Type: protein_coding
Species: Equus_caballus
Status: putative
Strand: Plus strand
Length: 13699 bases
Position: chr25:18616982-18630680
Accession: 21886
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSECAP00000005573	PRP4	PF08799.11	7e-14	1	1
ENSECAP00000037630	PRP4	PF08799.11	7.4e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSECAT00000007597	-	1584	-	ENSECAP00000005573	521 (aa)	XP_001488913	F7CKR6
ENSECAT00000042554	-	1626	-	ENSECAP00000037630	541 (aa)	-	-

Gene Model

Click here to download ENSECAG00000007072's gene model file

Pathways

Pathway ID	Pathway Name	Source
ecb03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSECAG00000007072's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSECAG00000007072	PRPF4	100	99.616	ENSG00000136875	PRPF4	100	99.616	Homo_sapiens
ENSECAG00000007072	PRPF4	96	77.406	ENSAPOG00000014132	prpf4	98	77.406	Acanthochromis_polyacanthus
ENSECAG00000007072	PRPF4	100	99.808	ENSAMEG00000013048	PRPF4	98	99.808	Ailuropoda_melanoleuca
ENSECAG00000007072	PRPF4	96	77.183	ENSACIG00000005579	prpf4	99	77.183	Amphilophus_citrinellus
ENSECAG00000007072	PRPF4	96	76.832	ENSAOCG00000005457	prpf4	99	76.832	Amphiprion_ocellaris
ENSECAG00000007072	PRPF4	96	76.634	ENSAPEG00000000776	prpf4	99	76.634	Amphiprion_percula
ENSECAG00000007072	PRPF4	96	76.587	ENSATEG00000023013	prpf4	99	76.587	Anabas_testudineus
ENSECAG00000007072	PRPF4	100	89.251	ENSAPLG00000006534	PRPF4	97	89.251	Anas_platyrhynchos
ENSECAG00000007072	PRPF4	100	90.057	ENSACAG00000015110	PRPF4	100	90.057	Anolis_carolinensis
ENSECAG00000007072	PRPF4	100	100.000	ENSANAG00000022464	PRPF4	96	100.000	Aotus_nancymaae
ENSECAG00000007072	PRPF4	96	76.984	ENSACLG00000019031	prpf4	99	76.984	Astatotilapia_calliptera
ENSECAG00000007072	PRPF4	97	62.380	ENSAMXG00000006756	prpf4	99	73.465	Astyanax_mexicanus
ENSECAG00000007072	PRPF4	100	99.040	ENSBTAG00000004571	PRPF4	100	99.040	Bos_taurus
ENSECAG00000007072	PRPF4	90	44.000	WBGene00007972	prp-4	96	44.000	Caenorhabditis_elegans
ENSECAG00000007072	PRPF4	100	99.808	ENSCJAG00000017856	PRPF4	100	99.808	Callithrix_jacchus
ENSECAG00000007072	PRPF4	100	99.808	ENSCAFG00000003224	PRPF4	97	99.808	Canis_familiaris
ENSECAG00000007072	PRPF4	100	99.808	ENSCAFG00020022637	PRPF4	100	99.808	Canis_lupus_dingo
ENSECAG00000007072	PRPF4	100	99.234	ENSCHIG00000024648	-	100	99.234	Capra_hircus
ENSECAG00000007072	PRPF4	100	99.616	ENSTSYG00000010366	PRPF4	100	99.616	Carlito_syrichta
ENSECAG00000007072	PRPF4	88	88.544	ENSCAPG00000008935	PRPF4	97	88.544	Cavia_aperea
ENSECAG00000007072	PRPF4	100	99.232	ENSCPOG00000010747	-	100	99.232	Cavia_porcellus
ENSECAG00000007072	PRPF4	100	92.706	ENSCPOG00000014729	-	100	92.706	Cavia_porcellus
ENSECAG00000007072	PRPF4	100	99.808	ENSCCAG00000028990	PRPF4	100	99.808	Cebus_capucinus
ENSECAG00000007072	PRPF4	100	99.616	ENSCATG00000021552	PRPF4	100	99.616	Cercocebus_atys
ENSECAG00000007072	PRPF4	100	99.424	ENSCLAG00000013448	PRPF4	100	99.424	Chinchilla_lanigera
ENSECAG00000007072	PRPF4	87	95.796	ENSCHOG00000007233	PRPF4	100	95.796	Choloepus_hoffmanni
ENSECAG00000007072	PRPF4	99	91.456	ENSCPBG00000019136	PRPF4	74	91.456	Chrysemys_picta_bellii
ENSECAG00000007072	PRPF4	96	59.252	ENSCING00000001299	-	97	58.614	Ciona_intestinalis
ENSECAG00000007072	PRPF4	96	57.540	ENSCSAVG00000009178	-	99	58.874	Ciona_savignyi
ENSECAG00000007072	PRPF4	100	99.808	ENSCANG00000003246	PRPF4	100	99.808	Colobus_angolensis_palliatus
ENSECAG00000007072	PRPF4	100	99.616	ENSCGRG00001016992	Prpf4	100	99.781	Cricetulus_griseus_chok1gshd
ENSECAG00000007072	PRPF4	100	99.616	ENSCGRG00000017560	Prpf4	100	99.781	Cricetulus_griseus_crigri
ENSECAG00000007072	PRPF4	97	75.842	ENSCSEG00000020451	prpf4	99	75.842	Cynoglossus_semilaevis
ENSECAG00000007072	PRPF4	97	79.802	ENSDARG00000067639	prpf4	99	79.802	Danio_rerio
ENSECAG00000007072	PRPF4	100	99.234	ENSDNOG00000013203	PRPF4	100	99.563	Dasypus_novemcinctus
ENSECAG00000007072	PRPF4	100	99.616	ENSDORG00000026275	Prpf4	100	99.616	Dipodomys_ordii
ENSECAG00000007072	PRPF4	87	56.674	FBgn0036733	U4-U6-60K	99	50.547	Drosophila_melanogaster
ENSECAG00000007072	PRPF4	100	97.514	ENSETEG00000020389	PRPF4	100	98.039	Echinops_telfairi
ENSECAG00000007072	PRPF4	95	73.041	ENSEBUG00000015229	prpf4	90	72.284	Eptatretus_burgeri
ENSECAG00000007072	PRPF4	100	100.000	ENSEASG00005022678	PRPF4	100	100.000	Equus_asinus_asinus
ENSECAG00000007072	PRPF4	100	78.603	ENSEEUG00000007480	PRPF4	100	78.603	Erinaceus_europaeus
ENSECAG00000007072	PRPF4	97	80.792	ENSELUG00000007510	prpf4	99	80.792	Esox_lucius
ENSECAG00000007072	PRPF4	100	99.808	ENSFCAG00000005514	PRPF4	100	99.808	Felis_catus
ENSECAG00000007072	PRPF4	98	88.341	ENSFALG00000005423	PRPF4	100	78.707	Ficedula_albicollis
ENSECAG00000007072	PRPF4	100	99.232	ENSFDAG00000005839	PRPF4	100	99.344	Fukomys_damarensis
ENSECAG00000007072	PRPF4	96	76.190	ENSFHEG00000001300	prpf4	99	76.190	Fundulus_heteroclitus
ENSECAG00000007072	PRPF4	98	90.215	ENSGALG00000008857	PRPF4	96	89.535	Gallus_gallus
ENSECAG00000007072	PRPF4	65	71.176	ENSGAFG00000012164	prpf4	70	71.176	Gambusia_affinis
ENSECAG00000007072	PRPF4	96	69.643	ENSGACG00000015476	prpf4	99	68.849	Gasterosteus_aculeatus
ENSECAG00000007072	PRPF4	99	91.262	ENSGAGG00000025029	PRPF4	95	91.262	Gopherus_agassizii
ENSECAG00000007072	PRPF4	100	99.616	ENSGGOG00000006943	PRPF4	100	99.616	Gorilla_gorilla
ENSECAG00000007072	PRPF4	96	76.786	ENSHBUG00000000562	prpf4	99	76.786	Haplochromis_burtoni
ENSECAG00000007072	PRPF4	100	82.027	ENSHGLG00000016628	-	100	82.792	Heterocephalus_glaber_female
ENSECAG00000007072	PRPF4	100	80.614	ENSHGLG00000003838	-	100	80.614	Heterocephalus_glaber_female
ENSECAG00000007072	PRPF4	100	99.232	ENSHGLG00000015191	PRPF4	100	99.344	Heterocephalus_glaber_female
ENSECAG00000007072	PRPF4	100	80.614	ENSHGLG00100005571	-	100	80.614	Heterocephalus_glaber_male
ENSECAG00000007072	PRPF4	97	78.812	ENSIPUG00000017956	PRPF4	99	78.812	Ictalurus_punctatus
ENSECAG00000007072	PRPF4	100	99.424	ENSSTOG00000027833	PRPF4	100	99.424	Ictidomys_tridecemlineatus
ENSECAG00000007072	PRPF4	100	99.616	ENSJJAG00000008838	Prpf4	100	99.616	Jaculus_jaculus
ENSECAG00000007072	PRPF4	96	76.190	ENSKMAG00000013236	prpf4	99	76.190	Kryptolebias_marmoratus
ENSECAG00000007072	PRPF4	96	75.896	ENSLBEG00000020611	prpf4	99	75.896	Labrus_bergylta
ENSECAG00000007072	PRPF4	99	80.347	ENSLACG00000016317	PRPF4	99	80.347	Latimeria_chalumnae
ENSECAG00000007072	PRPF4	97	81.782	ENSLOCG00000000581	prpf4	99	81.782	Lepisosteus_oculatus
ENSECAG00000007072	PRPF4	100	99.042	ENSLAFG00000018225	PRPF4	100	99.042	Loxodonta_africana
ENSECAG00000007072	PRPF4	100	99.424	ENSMFAG00000039397	PRPF4	100	99.424	Macaca_fascicularis
ENSECAG00000007072	PRPF4	100	99.616	ENSMMUG00000005844	PRPF4	100	99.616	Macaca_mulatta
ENSECAG00000007072	PRPF4	100	89.060	ENSMNEG00000033737	PRPF4	100	89.060	Macaca_nemestrina
ENSECAG00000007072	PRPF4	100	99.616	ENSMLEG00000040284	PRPF4	100	99.616	Mandrillus_leucophaeus
ENSECAG00000007072	PRPF4	97	76.134	ENSMAMG00000020141	prpf4	99	76.134	Mastacembelus_armatus
ENSECAG00000007072	PRPF4	96	76.984	ENSMZEG00005023205	prpf4	99	76.984	Maylandia_zebra
ENSECAG00000007072	PRPF4	99	88.462	ENSMGAG00000001796	PRPF4	97	88.462	Meleagris_gallopavo
ENSECAG00000007072	PRPF4	100	99.040	ENSMAUG00000018022	Prpf4	100	99.125	Mesocricetus_auratus
ENSECAG00000007072	PRPF4	100	98.848	ENSMICG00000015022	PRPF4	100	98.659	Microcebus_murinus
ENSECAG00000007072	PRPF4	100	99.040	ENSMOCG00000018273	Prpf4	100	99.125	Microtus_ochrogaster
ENSECAG00000007072	PRPF4	97	74.851	ENSMMOG00000021177	prpf4	99	74.851	Mola_mola
ENSECAG00000007072	PRPF4	100	95.220	ENSMODG00000025096	-	97	95.220	Monodelphis_domestica
ENSECAG00000007072	PRPF4	100	95.029	ENSMODG00000004444	-	100	95.029	Monodelphis_domestica
ENSECAG00000007072	PRPF4	96	76.587	ENSMALG00000013624	prpf4	99	76.587	Monopterus_albus
ENSECAG00000007072	PRPF4	100	99.424	MGP_CAROLIEiJ_G0026078	Prpf4	100	99.562	Mus_caroli
ENSECAG00000007072	PRPF4	100	99.424	ENSMUSG00000066148	Prpf4	100	99.562	Mus_musculus
ENSECAG00000007072	PRPF4	100	99.232	MGP_PahariEiJ_G0028413	Prpf4	100	99.344	Mus_pahari
ENSECAG00000007072	PRPF4	100	99.424	MGP_SPRETEiJ_G0027042	Prpf4	100	99.562	Mus_spretus
ENSECAG00000007072	PRPF4	100	99.808	ENSMPUG00000007883	PRPF4	100	99.808	Mustela_putorius_furo
ENSECAG00000007072	PRPF4	100	97.505	ENSMLUG00000008626	-	97	97.812	Myotis_lucifugus
ENSECAG00000007072	PRPF4	100	99.424	ENSMLUG00000015309	-	97	99.424	Myotis_lucifugus
ENSECAG00000007072	PRPF4	100	94.242	ENSNGAG00000000468	Prpf4	100	94.242	Nannospalax_galili
ENSECAG00000007072	PRPF4	96	77.183	ENSNBRG00000007972	prpf4	99	77.183	Neolamprologus_brichardi
ENSECAG00000007072	PRPF4	100	100.000	ENSNLEG00000016647	PRPF4	100	100.000	Nomascus_leucogenys
ENSECAG00000007072	PRPF4	99	95.136	ENSMEUG00000013256	PRPF4	100	95.136	Notamacropus_eugenii
ENSECAG00000007072	PRPF4	100	99.042	ENSOPRG00000005302	PRPF4	100	99.127	Ochotona_princeps
ENSECAG00000007072	PRPF4	100	99.616	ENSODEG00000018147	PRPF4	100	99.616	Octodon_degus
ENSECAG00000007072	PRPF4	99	75.287	ENSONIG00000012671	prpf4	99	76.984	Oreochromis_niloticus
ENSECAG00000007072	PRPF4	100	99.808	ENSOCUG00000005046	PRPF4	100	99.808	Oryctolagus_cuniculus
ENSECAG00000007072	PRPF4	96	74.900	ENSORLG00000019641	prpf4	99	74.900	Oryzias_latipes
ENSECAG00000007072	PRPF4	96	74.900	ENSORLG00020019438	prpf4	99	74.900	Oryzias_latipes_hni
ENSECAG00000007072	PRPF4	96	74.737	ENSOMEG00000020941	prpf4	99	74.737	Oryzias_melastigma
ENSECAG00000007072	PRPF4	100	94.626	ENSOGAG00000007802	PRPF4	98	94.626	Otolemur_garnettii
ENSECAG00000007072	PRPF4	100	99.424	ENSOARG00000006319	PRPF4	97	99.424	Ovis_aries
ENSECAG00000007072	PRPF4	100	99.616	ENSPPAG00000041797	PRPF4	100	99.616	Pan_paniscus
ENSECAG00000007072	PRPF4	100	100.000	ENSPPRG00000014360	PRPF4	100	100.000	Panthera_pardus
ENSECAG00000007072	PRPF4	100	100.000	ENSPTIG00000009574	PRPF4	100	100.000	Panthera_tigris_altaica
ENSECAG00000007072	PRPF4	100	99.616	ENSPTRG00000021274	PRPF4	100	99.425	Pan_troglodytes
ENSECAG00000007072	PRPF4	100	99.424	ENSPANG00000025776	PRPF4	96	99.424	Papio_anubis
ENSECAG00000007072	PRPF4	97	81.188	ENSPKIG00000017259	prpf4	99	81.188	Paramormyrops_kingsleyae
ENSECAG00000007072	PRPF4	100	89.827	ENSPSIG00000010713	PRPF4	91	90.347	Pelodiscus_sinensis
ENSECAG00000007072	PRPF4	99	58.608	ENSPMGG00000000997	prpf4	99	58.716	Periophthalmus_magnuspinnatus
ENSECAG00000007072	PRPF4	100	99.616	ENSPEMG00000024115	Prpf4	100	99.781	Peromyscus_maniculatus_bairdii
ENSECAG00000007072	PRPF4	99	95.136	ENSPCIG00000003821	PRPF4	99	95.136	Phascolarctos_cinereus
ENSECAG00000007072	PRPF4	96	70.020	ENSPFOG00000013524	prpf4	98	72.981	Poecilia_formosa
ENSECAG00000007072	PRPF4	83	71.560	ENSPLAG00000011620	prpf4	96	72.050	Poecilia_latipinna
ENSECAG00000007072	PRPF4	92	74.096	ENSPMEG00000006813	prpf4	98	74.096	Poecilia_mexicana
ENSECAG00000007072	PRPF4	98	99.415	ENSPCAG00000002561	PRPF4	99	99.415	Procavia_capensis
ENSECAG00000007072	PRPF4	100	99.424	ENSPCOG00000011975	PRPF4	100	99.424	Propithecus_coquereli
ENSECAG00000007072	PRPF4	100	95.785	ENSPVAG00000004708	PRPF4	100	95.785	Pteropus_vampyrus
ENSECAG00000007072	PRPF4	96	76.984	ENSPNYG00000008013	prpf4	99	76.984	Pundamilia_nyererei
ENSECAG00000007072	PRPF4	97	80.396	ENSPNAG00000000697	prpf4	99	80.396	Pygocentrus_nattereri
ENSECAG00000007072	PRPF4	100	99.232	ENSRNOG00000014777	Prpf4	100	99.344	Rattus_norvegicus
ENSECAG00000007072	PRPF4	100	99.808	ENSRBIG00000040221	PRPF4	100	99.808	Rhinopithecus_bieti
ENSECAG00000007072	PRPF4	100	99.808	ENSRROG00000040240	PRPF4	100	99.808	Rhinopithecus_roxellana
ENSECAG00000007072	PRPF4	100	95.602	ENSSHAG00000017658	PRPF4	100	95.602	Sarcophilus_harrisii
ENSECAG00000007072	PRPF4	97	81.980	ENSSFOG00015008963	prpf4	99	81.980	Scleropages_formosus
ENSECAG00000007072	PRPF4	96	75.595	ENSSMAG00000008889	prpf4	99	75.595	Scophthalmus_maximus
ENSECAG00000007072	PRPF4	96	73.506	ENSSDUG00000022083	prpf4	98	73.705	Seriola_dumerili
ENSECAG00000007072	PRPF4	96	73.705	ENSSLDG00000008115	prpf4	98	73.904	Seriola_lalandi_dorsalis
ENSECAG00000007072	PRPF4	100	90.595	ENSSPUG00000015582	PRPF4	100	90.595	Sphenodon_punctatus
ENSECAG00000007072	PRPF4	96	71.203	ENSSPAG00000011286	prpf4	99	71.203	Stegastes_partitus
ENSECAG00000007072	PRPF4	100	100.000	ENSSSCG00000024648	PRPF4	100	100.000	Sus_scrofa
ENSECAG00000007072	PRPF4	95	90.467	ENSTGUG00000002623	PRPF4	100	90.798	Taeniopygia_guttata
ENSECAG00000007072	PRPF4	97	75.494	ENSTRUG00000008853	prpf4	99	75.494	Takifugu_rubripes
ENSECAG00000007072	PRPF4	97	74.851	ENSTNIG00000013250	prpf4	99	74.851	Tetraodon_nigroviridis
ENSECAG00000007072	PRPF4	100	90.805	ENSTBEG00000000821	PRPF4	100	90.805	Tupaia_belangeri
ENSECAG00000007072	PRPF4	82	99.329	ENSTTRG00000003246	PRPF4	85	99.329	Tursiops_truncatus
ENSECAG00000007072	PRPF4	64	96.707	ENSUAMG00000018288	PRPF4	90	96.707	Ursus_americanus
ENSECAG00000007072	PRPF4	100	99.040	ENSUMAG00000019375	PRPF4	100	99.040	Ursus_maritimus
ENSECAG00000007072	PRPF4	100	99.234	ENSVPAG00000005281	PRPF4	100	99.234	Vicugna_pacos
ENSECAG00000007072	PRPF4	100	98.667	ENSVVUG00000002476	PRPF4	100	98.667	Vulpes_vulpes
ENSECAG00000007072	PRPF4	69	58.056	ENSXCOG00000006101	prpf4	93	59.360	Xiphophorus_couchianus
ENSECAG00000007072	PRPF4	88	64.410	ENSXMAG00000002750	prpf4	98	65.408	Xiphophorus_maculatus