EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSECAG00000007700 (Gene tree)
Gene ID: 100146683
Gene Symbol: RBM38
Alias: -
Full Name: RNA binding motif protein 38
Gene Type: protein_coding
Species: Equus_caballus
Status: putative
Strand: Plus strand
Length: 15509 bases
Position: chr22:44937129-44952637
Accession: 51597
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSECAP00000005720	RRM_1	PF00076.22	4.6e-18	1	1
ENSECAP00000034409	RRM_1	PF00076.22	1.1e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSECAT00000007757	-	1746	-	ENSECAP00000005720	239 (aa)	XP_023482560	F7DLQ2
ENSECAT00000042538	-	1691	-	ENSECAP00000034409	281 (aa)	-	-

Gene Model

Click here to download ENSECAG00000007700's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSECAG00000007700's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSECAG00000007700	RBM38	89	32.258	ENSECAG00000017526	MSI1	84	33.684
ENSECAG00000007700	RBM38	90	64.407	ENSECAG00000009819	RBM24	100	68.067

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSECAG00000007700	RBM38	100	94.979	ENSG00000132819	RBM38	100	97.521	Homo_sapiens
ENSECAG00000007700	RBM38	91	67.568	ENSAPOG00000009939	-	94	68.468	Acanthochromis_polyacanthus
ENSECAG00000007700	RBM38	89	58.190	ENSAPOG00000003301	rbm38	91	58.190	Acanthochromis_polyacanthus
ENSECAG00000007700	RBM38	89	69.266	ENSACIG00000012502	-	100	86.325	Amphilophus_citrinellus
ENSECAG00000007700	RBM38	89	57.082	ENSACIG00000000010	rbm38	91	57.082	Amphilophus_citrinellus
ENSECAG00000007700	RBM38	99	64.198	ENSAOCG00000012559	RBM38	99	64.754	Amphiprion_ocellaris
ENSECAG00000007700	RBM38	89	58.190	ENSAOCG00000013497	-	91	58.190	Amphiprion_ocellaris
ENSECAG00000007700	RBM38	99	59.836	ENSAPEG00000013137	rbm38	99	59.836	Amphiprion_percula
ENSECAG00000007700	RBM38	91	63.866	ENSAPEG00000023581	-	95	64.979	Amphiprion_percula
ENSECAG00000007700	RBM38	89	63.913	ENSATEG00000016710	-	92	65.368	Anabas_testudineus
ENSECAG00000007700	RBM38	90	60.268	ENSATEG00000016366	rbm38	94	60.268	Anabas_testudineus
ENSECAG00000007700	RBM38	91	77.273	ENSACAG00000016238	RBM38	97	73.729	Anolis_carolinensis
ENSECAG00000007700	RBM38	90	94.444	ENSANAG00000031959	RBM38	100	98.347	Aotus_nancymaae
ENSECAG00000007700	RBM38	89	65.217	ENSACLG00000019514	-	92	65.801	Astatotilapia_calliptera
ENSECAG00000007700	RBM38	91	66.234	ENSAMXG00000015601	-	95	66.957	Astyanax_mexicanus
ENSECAG00000007700	RBM38	88	57.658	ENSAMXG00000038120	rbm38	92	58.108	Astyanax_mexicanus
ENSECAG00000007700	RBM38	100	95.397	ENSBTAG00000008105	RBM38	100	95.397	Bos_taurus
ENSECAG00000007700	RBM38	100	94.979	ENSCJAG00000019139	RBM38	100	98.347	Callithrix_jacchus
ENSECAG00000007700	RBM38	100	96.234	ENSCAFG00020021943	RBM38	100	96.234	Canis_lupus_dingo
ENSECAG00000007700	RBM38	100	94.561	ENSCHIG00000002609	RBM38	100	94.561	Capra_hircus
ENSECAG00000007700	RBM38	100	94.142	ENSCPOG00000012781	RBM38	100	94.142	Cavia_porcellus
ENSECAG00000007700	RBM38	100	94.979	ENSCCAG00000036872	RBM38	100	98.347	Cebus_capucinus
ENSECAG00000007700	RBM38	100	95.397	ENSCATG00000032133	RBM38	100	98.347	Cercocebus_atys
ENSECAG00000007700	RBM38	96	93.043	ENSCLAG00000005906	RBM38	100	93.043	Chinchilla_lanigera
ENSECAG00000007700	RBM38	100	95.397	ENSCSAG00000015503	RBM38	100	95.397	Chlorocebus_sabaeus
ENSECAG00000007700	RBM38	90	81.193	ENSCPBG00000024059	RBM38	100	81.193	Chrysemys_picta_bellii
ENSECAG00000007700	RBM38	69	59.146	ENSCSAVG00000001132	-	79	55.189	Ciona_savignyi
ENSECAG00000007700	RBM38	99	73.529	ENSCANG00000030105	-	89	73.529	Colobus_angolensis_palliatus
ENSECAG00000007700	RBM38	100	90.795	ENSCGRG00001012928	Rbm38	100	90.795	Cricetulus_griseus_chok1gshd
ENSECAG00000007700	RBM38	62	66.000	ENSCSEG00000020943	rbm38	60	59.783	Cynoglossus_semilaevis
ENSECAG00000007700	RBM38	89	68.807	ENSCSEG00000004701	-	93	69.863	Cynoglossus_semilaevis
ENSECAG00000007700	RBM38	89	65.948	ENSCVAG00000005472	-	92	66.234	Cyprinodon_variegatus
ENSECAG00000007700	RBM38	88	57.328	ENSCVAG00000015952	rbm38	91	57.940	Cyprinodon_variegatus
ENSECAG00000007700	RBM38	88	64.126	ENSDARG00000058818	rbm38	92	64.126	Danio_rerio
ENSECAG00000007700	RBM38	90	88.426	ENSDNOG00000032004	RBM38	100	88.426	Dasypus_novemcinctus
ENSECAG00000007700	RBM38	100	92.083	ENSEEUG00000013489	RBM38	100	93.333	Erinaceus_europaeus
ENSECAG00000007700	RBM38	84	63.184	ENSELUG00000000585	-	87	63.184	Esox_lucius
ENSECAG00000007700	RBM38	90	65.254	ENSELUG00000005849	-	95	65.254	Esox_lucius
ENSECAG00000007700	RBM38	100	94.979	ENSFCAG00000042916	RBM38	100	98.347	Felis_catus
ENSECAG00000007700	RBM38	74	82.022	ENSFALG00000010805	RBM38	93	82.123	Ficedula_albicollis
ENSECAG00000007700	RBM38	89	57.511	ENSFHEG00000017748	rbm38	91	57.511	Fundulus_heteroclitus
ENSECAG00000007700	RBM38	89	71.163	ENSFHEG00000006160	-	92	71.163	Fundulus_heteroclitus
ENSECAG00000007700	RBM38	75	71.271	ENSGMOG00000016655	-	96	74.725	Gadus_morhua
ENSECAG00000007700	RBM38	90	79.817	ENSGALG00000026081	RBM38	100	79.358	Gallus_gallus
ENSECAG00000007700	RBM38	89	63.679	ENSGACG00000015224	rbm38	98	63.679	Gasterosteus_aculeatus
ENSECAG00000007700	RBM38	90	67.265	ENSGACG00000009873	-	100	67.411	Gasterosteus_aculeatus
ENSECAG00000007700	RBM38	90	81.651	ENSGAGG00000001187	RBM38	100	81.651	Gopherus_agassizii
ENSECAG00000007700	RBM38	89	69.585	ENSHBUG00000011778	-	92	70.183	Haplochromis_burtoni
ENSECAG00000007700	RBM38	96	58.921	ENSHBUG00000012058	rbm38	98	58.921	Haplochromis_burtoni
ENSECAG00000007700	RBM38	100	90.377	ENSHGLG00000015077	RBM38	100	90.377	Heterocephalus_glaber_female
ENSECAG00000007700	RBM38	79	71.354	ENSHCOG00000005622	-	54	71.875	Hippocampus_comes
ENSECAG00000007700	RBM38	69	63.473	ENSHCOG00000019040	rbm38	70	63.473	Hippocampus_comes
ENSECAG00000007700	RBM38	91	64.655	ENSIPUG00000019349	-	95	64.655	Ictalurus_punctatus
ENSECAG00000007700	RBM38	88	54.701	ENSKMAG00000012402	rbm38	98	55.128	Kryptolebias_marmoratus
ENSECAG00000007700	RBM38	89	58.369	ENSLBEG00000018878	rbm38	91	58.369	Labrus_bergylta
ENSECAG00000007700	RBM38	89	68.203	ENSLBEG00000016163	RBM38	92	68.807	Labrus_bergylta
ENSECAG00000007700	RBM38	91	71.111	ENSLOCG00000003456	rbm38	95	71.111	Lepisosteus_oculatus
ENSECAG00000007700	RBM38	98	95.319	ENSMFAG00000043808	RBM38	97	98.291	Macaca_fascicularis
ENSECAG00000007700	RBM38	100	95.397	ENSMMUG00000031391	RBM38	100	98.347	Macaca_mulatta
ENSECAG00000007700	RBM38	100	95.397	ENSMNEG00000034683	RBM38	100	98.347	Macaca_nemestrina
ENSECAG00000007700	RBM38	91	63.713	ENSMAMG00000020499	RBM38	95	65.678	Mastacembelus_armatus
ENSECAG00000007700	RBM38	89	59.227	ENSMAMG00000024135	rbm38	91	59.227	Mastacembelus_armatus
ENSECAG00000007700	RBM38	89	57.082	ENSMZEG00005026036	rbm38	91	57.082	Maylandia_zebra
ENSECAG00000007700	RBM38	89	69.585	ENSMZEG00005000849	-	92	70.183	Maylandia_zebra
ENSECAG00000007700	RBM38	100	90.377	ENSMAUG00000021211	Rbm38	100	90.377	Mesocricetus_auratus
ENSECAG00000007700	RBM38	90	95.370	ENSMICG00000038011	RBM38	100	95.370	Microcebus_murinus
ENSECAG00000007700	RBM38	100	89.540	ENSMOCG00000008715	Rbm38	100	89.540	Microtus_ochrogaster
ENSECAG00000007700	RBM38	99	65.546	ENSMMOG00000020051	-	99	66.109	Mola_mola
ENSECAG00000007700	RBM38	100	78.838	ENSMODG00000016458	RBM38	100	78.838	Monodelphis_domestica
ENSECAG00000007700	RBM38	77	73.016	ENSMALG00000004680	RBM38	70	73.016	Monopterus_albus
ENSECAG00000007700	RBM38	64	69.032	ENSMALG00000022327	rbm38	67	69.032	Monopterus_albus
ENSECAG00000007700	RBM38	100	89.540	MGP_CAROLIEiJ_G0024745	Rbm38	100	89.540	Mus_caroli
ENSECAG00000007700	RBM38	100	89.958	ENSMUSG00000027510	Rbm38	100	89.958	Mus_musculus
ENSECAG00000007700	RBM38	100	89.958	MGP_PahariEiJ_G0026186	Rbm38	100	89.958	Mus_pahari
ENSECAG00000007700	RBM38	100	89.540	MGP_SPRETEiJ_G0025665	Rbm38	100	89.540	Mus_spretus
ENSECAG00000007700	RBM38	77	96.757	ENSMPUG00000006518	RBM38	98	93.000	Mustela_putorius_furo
ENSECAG00000007700	RBM38	90	91.204	ENSMLUG00000011140	RBM38	100	91.204	Myotis_lucifugus
ENSECAG00000007700	RBM38	89	65.801	ENSNBRG00000022545	-	92	66.379	Neolamprologus_brichardi
ENSECAG00000007700	RBM38	96	59.167	ENSNBRG00000022685	rbm38	98	59.167	Neolamprologus_brichardi
ENSECAG00000007700	RBM38	58	78.261	ENSMEUG00000005475	-	100	78.261	Notamacropus_eugenii
ENSECAG00000007700	RBM38	100	94.142	ENSODEG00000007980	RBM38	100	94.142	Octodon_degus
ENSECAG00000007700	RBM38	88	57.328	ENSONIG00000017073	rbm38	93	57.328	Oreochromis_niloticus
ENSECAG00000007700	RBM38	88	65.652	ENSONIG00000020324	-	92	66.234	Oreochromis_niloticus
ENSECAG00000007700	RBM38	97	78.017	ENSOANG00000009259	RBM38	90	77.119	Ornithorhynchus_anatinus
ENSECAG00000007700	RBM38	89	62.661	ENSORLG00000027180	-	92	64.957	Oryzias_latipes
ENSECAG00000007700	RBM38	89	55.983	ENSORLG00000012154	rbm38	91	55.128	Oryzias_latipes
ENSECAG00000007700	RBM38	89	55.983	ENSORLG00020017871	rbm38	91	55.983	Oryzias_latipes_hni
ENSECAG00000007700	RBM38	89	62.661	ENSORLG00020020751	-	95	62.651	Oryzias_latipes_hni
ENSECAG00000007700	RBM38	89	62.931	ENSORLG00015017040	-	92	65.236	Oryzias_latipes_hsok
ENSECAG00000007700	RBM38	97	58.298	ENSORLG00015012606	rbm38	97	58.298	Oryzias_latipes_hsok
ENSECAG00000007700	RBM38	81	61.421	ENSOMEG00000006805	rbm38	77	61.421	Oryzias_melastigma
ENSECAG00000007700	RBM38	89	62.771	ENSOMEG00000023912	-	92	64.935	Oryzias_melastigma
ENSECAG00000007700	RBM38	100	94.583	ENSOGAG00000029136	RBM38	100	94.583	Otolemur_garnettii
ENSECAG00000007700	RBM38	100	94.979	ENSPPRG00000009507	RBM38	100	98.347	Panthera_pardus
ENSECAG00000007700	RBM38	87	92.308	ENSPTRG00000013661	RBM38	100	97.521	Pan_troglodytes
ENSECAG00000007700	RBM38	52	97.581	ENSPTRG00000045845	-	68	97.581	Pan_troglodytes
ENSECAG00000007700	RBM38	99	72.689	ENSPANG00000033127	-	100	72.689	Papio_anubis
ENSECAG00000007700	RBM38	100	95.397	ENSPANG00000020919	-	100	98.347	Papio_anubis
ENSECAG00000007700	RBM38	91	66.520	ENSPKIG00000018122	-	100	85.470	Paramormyrops_kingsleyae
ENSECAG00000007700	RBM38	94	62.705	ENSPKIG00000025417	rbm38	98	62.705	Paramormyrops_kingsleyae
ENSECAG00000007700	RBM38	93	79.911	ENSPSIG00000011649	RBM38	95	79.911	Pelodiscus_sinensis
ENSECAG00000007700	RBM38	89	63.248	ENSPMGG00000017094	-	92	64.255	Periophthalmus_magnuspinnatus
ENSECAG00000007700	RBM38	90	55.230	ENSPMGG00000011343	rbm38	94	56.485	Periophthalmus_magnuspinnatus
ENSECAG00000007700	RBM38	100	78.423	ENSPCIG00000013648	RBM38	100	78.423	Phascolarctos_cinereus
ENSECAG00000007700	RBM38	89	56.838	ENSPFOG00000011658	rbm38	91	57.692	Poecilia_formosa
ENSECAG00000007700	RBM38	89	65.532	ENSPLAG00000002500	-	92	67.797	Poecilia_latipinna
ENSECAG00000007700	RBM38	89	56.410	ENSPLAG00000005218	rbm38	91	57.692	Poecilia_latipinna
ENSECAG00000007700	RBM38	89	56.838	ENSPMEG00000015770	rbm38	91	57.692	Poecilia_mexicana
ENSECAG00000007700	RBM38	89	57.265	ENSPREG00000007398	rbm38	91	58.120	Poecilia_reticulata
ENSECAG00000007700	RBM38	100	94.583	ENSPCOG00000026201	RBM38	100	97.541	Propithecus_coquereli
ENSECAG00000007700	RBM38	100	66.109	ENSPVAG00000006457	RBM38	100	66.109	Pteropus_vampyrus
ENSECAG00000007700	RBM38	89	69.585	ENSPNYG00000019727	-	100	87.179	Pundamilia_nyererei
ENSECAG00000007700	RBM38	99	56.967	ENSPNYG00000021373	rbm38	98	58.577	Pundamilia_nyererei
ENSECAG00000007700	RBM38	91	66.087	ENSPNAG00000015123	-	96	75.758	Pygocentrus_nattereri
ENSECAG00000007700	RBM38	89	61.607	ENSPNAG00000010596	rbm38	93	61.607	Pygocentrus_nattereri
ENSECAG00000007700	RBM38	100	89.958	ENSRNOG00000006420	Rbm38	100	89.958	Rattus_norvegicus
ENSECAG00000007700	RBM38	100	77.824	ENSRROG00000036388	-	100	77.824	Rhinopithecus_roxellana
ENSECAG00000007700	RBM38	90	94.444	ENSSBOG00000031053	RBM38	100	98.131	Saimiri_boliviensis_boliviensis
ENSECAG00000007700	RBM38	89	65.455	ENSSFOG00015004453	rbm38	92	68.636	Scleropages_formosus
ENSECAG00000007700	RBM38	89	65.517	ENSSDUG00000021082	RBM38	92	65.948	Seriola_dumerili
ENSECAG00000007700	RBM38	89	59.657	ENSSDUG00000022611	rbm38	91	59.657	Seriola_dumerili
ENSECAG00000007700	RBM38	89	65.517	ENSSLDG00000011778	RBM38	92	65.948	Seriola_lalandi_dorsalis
ENSECAG00000007700	RBM38	89	63.721	ENSSLDG00000010845	rbm38	90	63.721	Seriola_lalandi_dorsalis
ENSECAG00000007700	RBM38	89	67.136	ENSSPAG00000020989	RBM38	91	69.159	Stegastes_partitus
ENSECAG00000007700	RBM38	89	57.511	ENSSPAG00000011113	rbm38	91	57.511	Stegastes_partitus
ENSECAG00000007700	RBM38	100	96.234	ENSSSCG00000007504	RBM38	100	96.234	Sus_scrofa
ENSECAG00000007700	RBM38	89	65.368	ENSTRUG00000019869	-	92	66.810	Takifugu_rubripes
ENSECAG00000007700	RBM38	89	55.895	ENSTRUG00000024954	rbm38	91	57.205	Takifugu_rubripes
ENSECAG00000007700	RBM38	89	68.636	ENSTNIG00000007093	-	97	69.683	Tetraodon_nigroviridis
ENSECAG00000007700	RBM38	100	95.397	ENSUAMG00000019780	RBM38	100	95.397	Ursus_americanus
ENSECAG00000007700	RBM38	100	96.234	ENSVVUG00000017246	RBM38	100	96.234	Vulpes_vulpes
ENSECAG00000007700	RBM38	92	72.889	ENSXETG00000011268	rbm38	100	74.222	Xenopus_tropicalis
ENSECAG00000007700	RBM38	89	57.940	ENSXMAG00000023662	rbm38	91	57.940	Xiphophorus_maculatus