EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSECAG00000007726 (Gene tree)
Gene ID: 100070262
Gene Symbol: APOBEC3H
Alias: APOBEC3Z3
Full Name: Equus caballus apolipoprotein B mRNA editing enzyme catalytic subunit 3H (APOBEC3H)%2C mRNA.
Gene Type: protein_coding
Species: Equus_caballus
Status: putative
Strand: Plus strand
Length: 4507 bases
Position: chr28:37114664-37119170
Accession: NM_001242451
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSECAP00000034895	APOBEC_N	PF08210.11	2.5e-40	1	1
ENSECAP00000035996	APOBEC_N	PF08210.11	5.7e-40	1	1
ENSECAP00000034895	APOBEC_C	PF05240.14	1.6e-30	1	1
ENSECAP00000035996	APOBEC_C	PF05240.14	3e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSECAT00000036251	-	696	-	ENSECAP00000034895	231 (aa)	-	C7AGG6
ENSECAT00000038529	-	951	-	ENSECAP00000035996	316 (aa)	-	-

Gene Model

Click here to download ENSECAG00000007726's gene model file

Pathways

Pathway ID	Pathway Name	Source
ecb05170	Human immunodeficiency virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSECAG00000007726's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSECAG00000007726	APOBEC3H	81	36.181	ENSECAG00000022371	APOBEC3Z1B	91	35.885
ENSECAG00000007726	APOBEC3H	92	36.184	ENSECAG00000032756	-	70	37.500
ENSECAG00000007726	APOBEC3H	79	34.737	ENSECAG00000006071	-	99	34.066
ENSECAG00000007726	APOBEC3H	74	36.571	ENSECAG00000018578	AICDA	89	35.754

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSECAG00000007726	APOBEC3H	75	52.809	ENSG00000100298	APOBEC3H	98	52.809	Homo_sapiens
ENSECAG00000007726	APOBEC3H	85	56.436	ENSAMEG00000010818	-	82	56.436	Ailuropoda_melanoleuca
ENSECAG00000007726	APOBEC3H	85	51.707	ENSANAG00000025410	APOBEC3H	91	51.942	Aotus_nancymaae
ENSECAG00000007726	APOBEC3H	86	58.152	ENSBTAG00000007755	APOBEC3H	99	58.152	Bos_taurus
ENSECAG00000007726	APOBEC3H	75	54.494	ENSCJAG00000012524	APOBEC3H	89	54.494	Callithrix_jacchus
ENSECAG00000007726	APOBEC3H	83	57.292	ENSCAFG00000001361	APOBEC3Z3	98	57.292	Canis_familiaris
ENSECAG00000007726	APOBEC3H	76	56.571	ENSCAFG00020002584	-	92	56.742	Canis_lupus_dingo
ENSECAG00000007726	APOBEC3H	86	56.784	ENSCHIG00000026580	-	97	59.677	Capra_hircus
ENSECAG00000007726	APOBEC3H	75	56.897	ENSTSYG00000032894	-	100	56.897	Carlito_syrichta
ENSECAG00000007726	APOBEC3H	83	51.562	ENSCPOG00000009257	-	83	51.562	Cavia_porcellus
ENSECAG00000007726	APOBEC3H	84	51.000	ENSCCAG00000008525	APOBEC3H	93	51.244	Cebus_capucinus
ENSECAG00000007726	APOBEC3H	75	51.685	ENSCATG00000030302	APOBEC3H	98	51.685	Cercocebus_atys
ENSECAG00000007726	APOBEC3H	85	50.761	ENSCLAG00000016615	-	97	50.761	Chinchilla_lanigera
ENSECAG00000007726	APOBEC3H	85	49.500	ENSCSAG00000006371	APOBEC3H	94	49.500	Chlorocebus_sabaeus
ENSECAG00000007726	APOBEC3H	98	50.495	ENSCGRG00001022976	Apobec3	99	50.495	Cricetulus_griseus_chok1gshd
ENSECAG00000007726	APOBEC3H	98	50.495	ENSCGRG00000005621	Apobec3	99	50.495	Cricetulus_griseus_crigri
ENSECAG00000007726	APOBEC3H	77	52.973	ENSDORG00000027271	-	100	43.878	Dipodomys_ordii
ENSECAG00000007726	APOBEC3H	60	98.421	ENSEASG00005009166	-	61	98.421	Equus_asinus_asinus
ENSECAG00000007726	APOBEC3H	83	59.375	ENSFCAG00000005251	APOBEC3Z3	98	59.375	Felis_catus
ENSECAG00000007726	APOBEC3H	76	49.718	ENSSTOG00000007125	-	94	47.449	Ictidomys_tridecemlineatus
ENSECAG00000007726	APOBEC3H	77	50.725	ENSJJAG00000016840	-	78	50.725	Jaculus_jaculus
ENSECAG00000007726	APOBEC3H	80	51.667	ENSLAFG00000027404	-	96	51.667	Loxodonta_africana
ENSECAG00000007726	APOBEC3H	85	50.500	ENSMFAG00000031827	APOBEC3H	94	50.500	Macaca_fascicularis
ENSECAG00000007726	APOBEC3H	85	51.500	ENSMMUG00000001016	APOBEC3H	94	51.500	Macaca_mulatta
ENSECAG00000007726	APOBEC3H	85	50.500	ENSMNEG00000039259	APOBEC3H	94	50.500	Macaca_nemestrina
ENSECAG00000007726	APOBEC3H	85	50.000	ENSMLEG00000033417	APOBEC3H	94	50.000	Mandrillus_leucophaeus
ENSECAG00000007726	APOBEC3H	98	48.485	ENSMAUG00000011683	Apobec3	93	50.000	Mesocricetus_auratus
ENSECAG00000007726	APOBEC3H	98	47.475	ENSMOCG00000021576	Apobec3	96	48.901	Microtus_ochrogaster
ENSECAG00000007726	APOBEC3H	98	46.429	MGP_CAROLIEiJ_G0020029	Apobec3	98	47.514	Mus_caroli
ENSECAG00000007726	APOBEC3H	98	47.692	ENSMUSG00000009585	Apobec3	98	48.889	Mus_musculus
ENSECAG00000007726	APOBEC3H	98	46.231	MGP_PahariEiJ_G0020031	-	99	46.231	Mus_pahari
ENSECAG00000007726	APOBEC3H	98	47.716	MGP_SPRETEiJ_G0020927	Apobec3	98	48.901	Mus_spretus
ENSECAG00000007726	APOBEC3H	86	53.030	ENSMPUG00000013239	-	86	53.030	Mustela_putorius_furo
ENSECAG00000007726	APOBEC3H	83	47.917	ENSNGAG00000018998	Apobec3	97	47.917	Nannospalax_galili
ENSECAG00000007726	APOBEC3H	85	54.229	ENSNLEG00000015218	-	95	54.229	Nomascus_leucogenys
ENSECAG00000007726	APOBEC3H	90	42.045	ENSOCUG00000023913	-	98	42.458	Oryctolagus_cuniculus
ENSECAG00000007726	APOBEC3H	81	59.563	ENSOARG00000016290	APOBEC3F	97	59.563	Ovis_aries
ENSECAG00000007726	APOBEC3H	75	52.809	ENSPPAG00000036522	APOBEC3H	97	52.809	Pan_paniscus
ENSECAG00000007726	APOBEC3H	83	59.585	ENSPPRG00000003941	-	98	59.585	Panthera_pardus
ENSECAG00000007726	APOBEC3H	79	33.333	ENSPPRG00000003675	-	97	33.333	Panthera_pardus
ENSECAG00000007726	APOBEC3H	83	60.104	ENSPTIG00000010283	-	98	60.104	Panthera_tigris_altaica
ENSECAG00000007726	APOBEC3H	75	52.809	ENSPTRG00000014390	APOBEC3H	97	52.809	Pan_troglodytes
ENSECAG00000007726	APOBEC3H	85	51.000	ENSPANG00000010774	APOBEC3H	94	51.000	Papio_anubis
ENSECAG00000007726	APOBEC3H	86	47.264	ENSPEMG00000000456	Apobec3	87	44.493	Peromyscus_maniculatus_bairdii
ENSECAG00000007726	APOBEC3H	85	51.000	ENSPPYG00000011834	-	95	50.746	Pongo_abelii
ENSECAG00000007726	APOBEC3H	76	45.198	ENSPCAG00000015655	-	99	45.198	Procavia_capensis
ENSECAG00000007726	APOBEC3H	54	40.323	ENSPVAG00000024161	-	94	40.323	Pteropus_vampyrus
ENSECAG00000007726	APOBEC3H	54	38.710	ENSPVAG00000024267	-	94	38.710	Pteropus_vampyrus
ENSECAG00000007726	APOBEC3H	76	60.227	ENSPVAG00000009462	-	99	60.227	Pteropus_vampyrus
ENSECAG00000007726	APOBEC3H	90	48.901	ENSRNOG00000016852	Apobec3	99	48.901	Rattus_norvegicus
ENSECAG00000007726	APOBEC3H	85	51.000	ENSRBIG00000029088	APOBEC3H	94	51.000	Rhinopithecus_bieti
ENSECAG00000007726	APOBEC3H	87	50.490	ENSRROG00000024699	APOBEC3H	94	51.000	Rhinopithecus_roxellana
ENSECAG00000007726	APOBEC3H	75	53.889	ENSSBOG00000030005	APOBEC3H	97	55.474	Saimiri_boliviensis_boliviensis
ENSECAG00000007726	APOBEC3H	98	57.576	ENSSSCG00000000091	APOBEC3B	97	57.789	Sus_scrofa
ENSECAG00000007726	APOBEC3H	73	52.663	ENSTBEG00000001532	-	99	52.663	Tupaia_belangeri
ENSECAG00000007726	APOBEC3H	76	60.795	ENSTTRG00000001266	-	99	60.795	Tursiops_truncatus
ENSECAG00000007726	APOBEC3H	78	55.851	ENSUAMG00000004427	-	85	55.851	Ursus_americanus
ENSECAG00000007726	APOBEC3H	97	54.222	ENSUMAG00000014435	-	98	58.854	Ursus_maritimus
ENSECAG00000007726	APOBEC3H	55	58.268	ENSVPAG00000011108	-	99	58.268	Vicugna_pacos
ENSECAG00000007726	APOBEC3H	76	57.778	ENSVVUG00000014624	-	59	65.116	Vulpes_vulpes