EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSECAG00000007745 (Gene tree)
Gene ID: 100071725
Gene Symbol: RBM28
Alias: -
Full Name: RNA binding motif protein 28
Gene Type: protein_coding
Species: Equus_caballus
Status: putative
Strand: Minus strand
Length: 26906 bases
Position: chr4:83570986-83597891
Accession: 22241
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSECAP00000006166	RRM_1	PF00076.22	6e-56	1	3
ENSECAP00000006166	RRM_1	PF00076.22	6e-56	2	3
ENSECAP00000006166	RRM_1	PF00076.22	6e-56	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSECAT00000008258	-	3346	-	ENSECAP00000006166	768 (aa)	XP_001502696	F6UN00

Gene Model

Click here to download ENSECAG00000007745's gene model file

Pathways

Pathway ID	Pathway Name	Source
ecb03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSECAG00000007745's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSECAG00000007745	RBM28	100	85.286	ENSG00000106344	RBM28	100	97.500	Homo_sapiens
ENSECAG00000007745	RBM28	56	54.853	ENSAPOG00000015512	rbm28	64	52.305	Acanthochromis_polyacanthus
ENSECAG00000007745	RBM28	100	92.391	ENSAMEG00000004776	RBM28	72	92.391	Ailuropoda_melanoleuca
ENSECAG00000007745	RBM28	55	55.476	ENSACIG00000023153	rbm28	100	52.521	Amphilophus_citrinellus
ENSECAG00000007745	RBM28	56	55.000	ENSAOCG00000000462	rbm28	66	52.446	Amphiprion_ocellaris
ENSECAG00000007745	RBM28	56	55.000	ENSAPEG00000012996	rbm28	64	53.659	Amphiprion_percula
ENSECAG00000007745	RBM28	58	51.477	ENSATEG00000001672	rbm28	67	50.097	Anabas_testudineus
ENSECAG00000007745	RBM28	100	84.505	ENSANAG00000033922	RBM28	100	84.375	Aotus_nancymaae
ENSECAG00000007745	RBM28	100	49.362	ENSACLG00000025024	rbm28	65	53.280	Astatotilapia_calliptera
ENSECAG00000007745	RBM28	57	57.500	ENSAMXG00000000763	rbm28	99	59.142	Astyanax_mexicanus
ENSECAG00000007745	RBM28	100	85.026	ENSBTAG00000017001	RBM28	100	97.500	Bos_taurus
ENSECAG00000007745	RBM28	100	82.943	ENSCJAG00000017731	RBM28	100	82.552	Callithrix_jacchus
ENSECAG00000007745	RBM28	100	88.036	ENSCAFG00000001667	RBM28	100	87.256	Canis_familiaris
ENSECAG00000007745	RBM28	100	88.036	ENSCAFG00020021648	RBM28	100	87.256	Canis_lupus_dingo
ENSECAG00000007745	RBM28	100	84.635	ENSCHIG00000014146	RBM28	100	84.245	Capra_hircus
ENSECAG00000007745	RBM28	100	83.594	ENSTSYG00000002892	RBM28	100	92.500	Carlito_syrichta
ENSECAG00000007745	RBM28	84	59.938	ENSCAPG00000013218	RBM28	100	60.248	Cavia_aperea
ENSECAG00000007745	RBM28	100	82.161	ENSCPOG00000006253	RBM28	100	82.031	Cavia_porcellus
ENSECAG00000007745	RBM28	100	83.464	ENSCCAG00000035105	RBM28	100	83.984	Cebus_capucinus
ENSECAG00000007745	RBM28	100	85.156	ENSCATG00000040497	RBM28	100	95.000	Cercocebus_atys
ENSECAG00000007745	RBM28	100	78.906	ENSCLAG00000003707	RBM28	100	78.646	Chinchilla_lanigera
ENSECAG00000007745	RBM28	100	84.245	ENSCSAG00000010161	RBM28	100	83.854	Chlorocebus_sabaeus
ENSECAG00000007745	RBM28	56	88.710	ENSCHOG00000001994	-	63	88.710	Choloepus_hoffmanni
ENSECAG00000007745	RBM28	51	61.161	ENSCPBG00000018088	RBM28	87	60.814	Chrysemys_picta_bellii
ENSECAG00000007745	RBM28	91	84.615	ENSCANG00000038397	RBM28	100	97.500	Colobus_angolensis_palliatus
ENSECAG00000007745	RBM28	65	83.936	ENSCGRG00001021278	Rbm28	64	83.936	Cricetulus_griseus_chok1gshd
ENSECAG00000007745	RBM28	100	80.859	ENSCGRG00000005098	Rbm28	100	81.120	Cricetulus_griseus_crigri
ENSECAG00000007745	RBM28	57	55.432	ENSCVAG00000010493	rbm28	64	51.297	Cyprinodon_variegatus
ENSECAG00000007745	RBM28	100	53.023	ENSDARG00000025332	rbm28	84	52.756	Danio_rerio
ENSECAG00000007745	RBM28	100	84.635	ENSDNOG00000001124	RBM28	100	84.896	Dasypus_novemcinctus
ENSECAG00000007745	RBM28	64	82.460	ENSDORG00000004184	Rbm28	97	82.661	Dipodomys_ordii
ENSECAG00000007745	RBM28	71	37.297	FBgn0260456	CG4806	93	34.548	Drosophila_melanogaster
ENSECAG00000007745	RBM28	100	70.801	ENSETEG00000007130	RBM28	99	71.189	Echinops_telfairi
ENSECAG00000007745	RBM28	99	40.915	ENSEBUG00000004419	rbm28	94	46.875	Eptatretus_burgeri
ENSECAG00000007745	RBM28	100	98.698	ENSEASG00005008528	RBM28	100	98.698	Equus_asinus_asinus
ENSECAG00000007745	RBM28	100	77.893	ENSEEUG00000002389	RBM28	100	77.503	Erinaceus_europaeus
ENSECAG00000007745	RBM28	100	52.233	ENSELUG00000020602	rbm28	65	52.816	Esox_lucius
ENSECAG00000007745	RBM28	100	85.938	ENSFCAG00000000946	RBM28	100	97.500	Felis_catus
ENSECAG00000007745	RBM28	100	83.203	ENSFDAG00000010169	RBM28	100	82.422	Fukomys_damarensis
ENSECAG00000007745	RBM28	83	56.061	ENSGMOG00000007091	rbm28	73	49.231	Gadus_morhua
ENSECAG00000007745	RBM28	57	54.810	ENSGAFG00000004802	rbm28	97	54.305	Gambusia_affinis
ENSECAG00000007745	RBM28	56	54.649	ENSGACG00000012612	rbm28	84	51.072	Gasterosteus_aculeatus
ENSECAG00000007745	RBM28	81	72.139	ENSGAGG00000008873	RBM28	85	80.220	Gopherus_agassizii
ENSECAG00000007745	RBM28	95	83.813	ENSGGOG00000004644	RBM28	97	83.539	Gorilla_gorilla
ENSECAG00000007745	RBM28	91	50.785	ENSHBUG00000009611	rbm28	57	55.687	Haplochromis_burtoni
ENSECAG00000007745	RBM28	100	83.464	ENSHGLG00000005409	RBM28	100	82.682	Heterocephalus_glaber_female
ENSECAG00000007745	RBM28	100	82.943	ENSHGLG00100016458	RBM28	100	82.031	Heterocephalus_glaber_male
ENSECAG00000007745	RBM28	81	49.223	ENSHCOG00000010597	rbm28	99	41.409	Hippocampus_comes
ENSECAG00000007745	RBM28	55	49.526	ENSIPUG00000007103	rbm28	91	47.390	Ictalurus_punctatus
ENSECAG00000007745	RBM28	100	84.635	ENSSTOG00000002169	RBM28	100	83.984	Ictidomys_tridecemlineatus
ENSECAG00000007745	RBM28	100	74.578	ENSJJAG00000022400	Rbm28	100	75.227	Jaculus_jaculus
ENSECAG00000007745	RBM28	57	55.506	ENSKMAG00000013348	rbm28	63	52.761	Kryptolebias_marmoratus
ENSECAG00000007745	RBM28	58	55.727	ENSLBEG00000012998	rbm28	63	53.614	Labrus_bergylta
ENSECAG00000007745	RBM28	74	57.192	ENSLACG00000010485	-	54	59.603	Latimeria_chalumnae
ENSECAG00000007745	RBM28	100	64.103	ENSLOCG00000015541	rbm28	84	64.433	Lepisosteus_oculatus
ENSECAG00000007745	RBM28	100	83.073	ENSLAFG00000010717	RBM28	100	82.682	Loxodonta_africana
ENSECAG00000007745	RBM28	100	85.417	ENSMFAG00000031036	RBM28	100	95.000	Macaca_fascicularis
ENSECAG00000007745	RBM28	100	85.677	ENSMMUG00000007250	RBM28	100	95.000	Macaca_mulatta
ENSECAG00000007745	RBM28	100	85.547	ENSMNEG00000036970	RBM28	100	95.000	Macaca_nemestrina
ENSECAG00000007745	RBM28	84	84.277	ENSMLEG00000037717	RBM28	100	84.067	Mandrillus_leucophaeus
ENSECAG00000007745	RBM28	100	49.875	ENSMAMG00000008525	rbm28	64	53.593	Mastacembelus_armatus
ENSECAG00000007745	RBM28	93	48.564	ENSMZEG00005019625	rbm28	70	53.280	Maylandia_zebra
ENSECAG00000007745	RBM28	100	79.028	ENSMAUG00000002263	Rbm28	100	79.692	Mesocricetus_auratus
ENSECAG00000007745	RBM28	93	82.410	ENSMICG00000000107	RBM28	100	83.657	Microcebus_murinus
ENSECAG00000007745	RBM28	100	80.130	ENSMOCG00000014615	Rbm28	100	80.000	Microtus_ochrogaster
ENSECAG00000007745	RBM28	57	54.128	ENSMMOG00000008600	rbm28	100	51.446	Mola_mola
ENSECAG00000007745	RBM28	100	72.680	ENSMODG00000015151	RBM28	100	73.522	Monodelphis_domestica
ENSECAG00000007745	RBM28	57	53.499	ENSMALG00000006419	rbm28	64	51.724	Monopterus_albus
ENSECAG00000007745	RBM28	100	80.130	MGP_CAROLIEiJ_G0028162	Rbm28	100	80.000	Mus_caroli
ENSECAG00000007745	RBM28	100	79.610	ENSMUSG00000029701	Rbm28	100	80.000	Mus_musculus
ENSECAG00000007745	RBM28	100	80.260	MGP_PahariEiJ_G0021920	Rbm28	100	80.260	Mus_pahari
ENSECAG00000007745	RBM28	100	79.870	MGP_SPRETEiJ_G0029162	Rbm28	100	80.260	Mus_spretus
ENSECAG00000007745	RBM28	100	86.364	ENSMPUG00000006511	RBM28	100	86.364	Mustela_putorius_furo
ENSECAG00000007745	RBM28	100	88.021	ENSMLUG00000002186	RBM28	100	87.500	Myotis_lucifugus
ENSECAG00000007745	RBM28	100	77.995	ENSNGAG00000017946	-	100	77.474	Nannospalax_galili
ENSECAG00000007745	RBM28	100	80.078	ENSNGAG00000006480	-	100	79.454	Nannospalax_galili
ENSECAG00000007745	RBM28	100	84.896	ENSNLEG00000012307	RBM28	100	97.500	Nomascus_leucogenys
ENSECAG00000007745	RBM28	80	85.185	ENSMEUG00000009611	RBM28	91	85.185	Notamacropus_eugenii
ENSECAG00000007745	RBM28	100	77.865	ENSODEG00000003213	-	100	77.763	Octodon_degus
ENSECAG00000007745	RBM28	75	87.688	ENSODEG00000013217	-	84	87.688	Octodon_degus
ENSECAG00000007745	RBM28	57	53.642	ENSONIG00000014924	rbm28	64	52.610	Oreochromis_niloticus
ENSECAG00000007745	RBM28	100	64.322	ENSOANG00000000815	-	67	63.938	Ornithorhynchus_anatinus
ENSECAG00000007745	RBM28	100	80.390	ENSOCUG00000003009	RBM28	100	80.234	Oryctolagus_cuniculus
ENSECAG00000007745	RBM28	99	50.190	ENSORLG00000009636	rbm28	64	52.834	Oryzias_latipes
ENSECAG00000007745	RBM28	57	54.945	ENSORLG00020002123	rbm28	66	52.727	Oryzias_latipes_hni
ENSECAG00000007745	RBM28	84	58.373	ENSORLG00015015030	rbm28	98	57.767	Oryzias_latipes_hsok
ENSECAG00000007745	RBM28	57	57.081	ENSOMEG00000007801	rbm28	65	54.150	Oryzias_melastigma
ENSECAG00000007745	RBM28	94	90.000	ENSOGAG00000006011	RBM28	100	90.000	Otolemur_garnettii
ENSECAG00000007745	RBM28	100	84.695	ENSOARG00000002547	RBM28	100	84.047	Ovis_aries
ENSECAG00000007745	RBM28	100	85.417	ENSPPAG00000041730	RBM28	100	97.500	Pan_paniscus
ENSECAG00000007745	RBM28	100	85.436	ENSPPRG00000004420	RBM28	100	97.500	Panthera_pardus
ENSECAG00000007745	RBM28	100	86.068	ENSPTIG00000008550	RBM28	100	97.500	Panthera_tigris_altaica
ENSECAG00000007745	RBM28	100	85.547	ENSPTRG00000019659	RBM28	100	97.500	Pan_troglodytes
ENSECAG00000007745	RBM28	100	85.677	ENSPANG00000022295	RBM28	100	95.000	Papio_anubis
ENSECAG00000007745	RBM28	99	51.648	ENSPKIG00000023453	rbm28	99	50.304	Paramormyrops_kingsleyae
ENSECAG00000007745	RBM28	82	60.099	ENSPMGG00000012840	rbm28	100	60.099	Periophthalmus_magnuspinnatus
ENSECAG00000007745	RBM28	100	77.763	ENSPEMG00000020673	Rbm28	69	82.143	Peromyscus_maniculatus_bairdii
ENSECAG00000007745	RBM28	100	71.521	ENSPCIG00000012810	RBM28	100	72.108	Phascolarctos_cinereus
ENSECAG00000007745	RBM28	57	55.333	ENSPFOG00000018209	rbm28	63	53.659	Poecilia_formosa
ENSECAG00000007745	RBM28	57	54.730	ENSPLAG00000016078	rbm28	61	52.236	Poecilia_latipinna
ENSECAG00000007745	RBM28	57	55.679	ENSPMEG00000004292	rbm28	63	53.550	Poecilia_mexicana
ENSECAG00000007745	RBM28	55	54.965	ENSPREG00000014287	rbm28	80	51.440	Poecilia_reticulata
ENSECAG00000007745	RBM28	100	85.156	ENSPPYG00000017975	RBM28	100	84.635	Pongo_abelii
ENSECAG00000007745	RBM28	73	75.775	ENSPCAG00000008223	RBM28	83	75.900	Procavia_capensis
ENSECAG00000007745	RBM28	100	85.286	ENSPCOG00000016797	RBM28	100	97.500	Propithecus_coquereli
ENSECAG00000007745	RBM28	76	93.488	ENSPVAG00000005443	RBM28	77	93.488	Pteropus_vampyrus
ENSECAG00000007745	RBM28	100	49.235	ENSPNYG00000014003	rbm28	65	53.082	Pundamilia_nyererei
ENSECAG00000007745	RBM28	100	77.893	ENSRNOG00000005468	Rbm28	100	77.893	Rattus_norvegicus
ENSECAG00000007745	RBM28	100	85.547	ENSRBIG00000033990	RBM28	100	97.500	Rhinopithecus_bieti
ENSECAG00000007745	RBM28	100	85.677	ENSRROG00000040747	RBM28	100	97.500	Rhinopithecus_roxellana
ENSECAG00000007745	RBM28	86	80.519	ENSSBOG00000012308	RBM28	100	79.740	Saimiri_boliviensis_boliviensis
ENSECAG00000007745	RBM28	96	67.604	ENSSHAG00000017017	RBM28	99	67.560	Sarcophilus_harrisii
ENSECAG00000007745	RBM28	86	59.389	ENSSFOG00015001231	rbm28	70	53.529	Scleropages_formosus
ENSECAG00000007745	RBM28	57	53.846	ENSSMAG00000003885	rbm28	99	51.033	Scophthalmus_maximus
ENSECAG00000007745	RBM28	57	55.629	ENSSDUG00000014270	rbm28	99	52.827	Seriola_dumerili
ENSECAG00000007745	RBM28	57	55.629	ENSSLDG00000020099	rbm28	66	52.734	Seriola_lalandi_dorsalis
ENSECAG00000007745	RBM28	75	87.719	ENSSARG00000008303	RBM28	81	87.719	Sorex_araneus
ENSECAG00000007745	RBM28	65	75.000	ENSSPUG00000000838	RBM28	79	75.000	Sphenodon_punctatus
ENSECAG00000007745	RBM28	57	52.434	ENSSPAG00000023305	rbm28	69	52.475	Stegastes_partitus
ENSECAG00000007745	RBM28	100	86.494	ENSSSCG00000031847	RBM28	100	86.328	Sus_scrofa
ENSECAG00000007745	RBM28	58	53.419	ENSTRUG00000013311	rbm28	63	51.287	Takifugu_rubripes
ENSECAG00000007745	RBM28	99	50.769	ENSTNIG00000017962	rbm28	63	52.401	Tetraodon_nigroviridis
ENSECAG00000007745	RBM28	86	87.574	ENSTBEG00000012749	RBM28	86	87.574	Tupaia_belangeri
ENSECAG00000007745	RBM28	100	83.658	ENSTTRG00000013647	RBM28	62	89.722	Tursiops_truncatus
ENSECAG00000007745	RBM28	100	80.415	ENSUAMG00000006949	RBM28	100	80.674	Ursus_americanus
ENSECAG00000007745	RBM28	100	87.630	ENSUMAG00000005997	RBM28	100	87.500	Ursus_maritimus
ENSECAG00000007745	RBM28	85	80.122	ENSVPAG00000008304	RBM28	87	79.228	Vicugna_pacos
ENSECAG00000007745	RBM28	100	87.776	ENSVVUG00000007270	RBM28	100	86.996	Vulpes_vulpes
ENSECAG00000007745	RBM28	99	55.032	ENSXETG00000009271	rbm28	69	49.567	Xenopus_tropicalis
ENSECAG00000007745	RBM28	57	53.604	ENSXCOG00000020357	rbm28	99	51.867	Xiphophorus_couchianus
ENSECAG00000007745	RBM28	57	54.402	ENSXMAG00000004415	rbm28	66	51.881	Xiphophorus_maculatus