EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSECAG00000008746 (Gene tree)
Gene ID: 100064310
Gene Symbol: -
Alias: -
Full Name: eukaryotic translation initiation factor 3 subunit C
Gene Type: protein_coding
Species: Equus_caballus
Status: putative
Strand: Plus strand
Length: 20008 bases
Position: chr13:20889378-20909385
Accession: 100064310
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSECAP00000007173	eIF-3c_N	PF05470.12	9.8e-272	1	1
ENSECAP00000030846	eIF-3c_N	PF05470.12	6.9e-221	1	2
ENSECAP00000030846	eIF-3c_N	PF05470.12	6.9e-221	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSECAT00000009427	-	2777	XM_014730035	ENSECAP00000007173	913 (aa)	XP_014585521	F6Z4N9
ENSECAT00000046148	-	2552	-	ENSECAP00000030846	838 (aa)	-	-

Gene Model

Click here to download ENSECAG00000008746's gene model file

Pathways

Pathway ID	Pathway Name	Source
ecb03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSECAG00000008746's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSECAG00000008746	-	100	98.576	ENSG00000184110	EIF3C	100	100.000	Homo_sapiens
ENSECAG00000008746	-	100	98.468	ENSG00000205609	EIF3CL	100	98.468	Homo_sapiens
ENSECAG00000008746	-	99	76.061	ENSAPOG00000024092	eif3c	92	84.176	Acanthochromis_polyacanthus
ENSECAG00000008746	-	100	99.343	ENSAMEG00000015454	-	100	99.343	Ailuropoda_melanoleuca
ENSECAG00000008746	-	99	76.230	ENSACIG00000015082	eif3c	93	84.053	Amphilophus_citrinellus
ENSECAG00000008746	-	94	83.993	ENSAOCG00000021466	eif3c	98	76.496	Amphiprion_ocellaris
ENSECAG00000008746	-	94	83.993	ENSAPEG00000010521	eif3c	98	76.496	Amphiprion_percula
ENSECAG00000008746	-	99	76.381	ENSATEG00000019001	eif3c	98	76.848	Anabas_testudineus
ENSECAG00000008746	-	100	86.369	ENSACAG00000005937	-	100	86.478	Anolis_carolinensis
ENSECAG00000008746	-	100	98.467	ENSANAG00000020640	-	100	98.467	Aotus_nancymaae
ENSECAG00000008746	-	84	80.782	ENSACLG00000009322	eif3c	92	80.782	Astatotilapia_calliptera
ENSECAG00000008746	-	84	83.636	ENSACLG00000009347	eif3c	98	83.636	Astatotilapia_calliptera
ENSECAG00000008746	-	99	76.923	ENSAMXG00000020949	eif3c	98	76.965	Astyanax_mexicanus
ENSECAG00000008746	-	100	98.138	ENSBTAG00000006543	EIF3CL	100	98.138	Bos_taurus
ENSECAG00000008746	-	95	42.489	WBGene00001226	eif-3.C	93	43.356	Caenorhabditis_elegans
ENSECAG00000008746	-	100	98.357	ENSCJAG00000006341	-	100	98.357	Callithrix_jacchus
ENSECAG00000008746	-	100	99.124	ENSCAFG00000017143	-	100	99.124	Canis_familiaris
ENSECAG00000008746	-	100	99.233	ENSCAFG00020017587	-	100	99.233	Canis_lupus_dingo
ENSECAG00000008746	-	100	98.686	ENSCHIG00000024795	-	100	98.686	Capra_hircus
ENSECAG00000008746	-	100	98.138	ENSTSYG00000003486	-	100	98.138	Carlito_syrichta
ENSECAG00000008746	-	96	88.901	ENSCAPG00000015887	-	100	88.901	Cavia_aperea
ENSECAG00000008746	-	100	98.357	ENSCPOG00000007533	-	100	98.357	Cavia_porcellus
ENSECAG00000008746	-	100	97.371	ENSCCAG00000034928	-	100	97.371	Cebus_capucinus
ENSECAG00000008746	-	100	93.409	ENSCCAG00000027724	-	100	92.333	Cebus_capucinus
ENSECAG00000008746	-	99	83.150	ENSCCAG00000029099	-	99	81.978	Cebus_capucinus
ENSECAG00000008746	-	100	98.467	ENSCATG00000032673	-	100	98.467	Cercocebus_atys
ENSECAG00000008746	-	100	97.809	ENSCLAG00000011094	-	100	97.809	Chinchilla_lanigera
ENSECAG00000008746	-	100	98.467	ENSCSAG00000006297	-	100	98.467	Chlorocebus_sabaeus
ENSECAG00000008746	-	55	82.625	ENSCHOG00000003120	-	88	82.625	Choloepus_hoffmanni
ENSECAG00000008746	-	71	92.038	ENSCPBG00000012407	-	94	84.342	Chrysemys_picta_bellii
ENSECAG00000008746	-	79	56.336	ENSCSAVG00000006744	-	98	57.018	Ciona_savignyi
ENSECAG00000008746	-	100	98.467	ENSCANG00000033626	-	100	98.467	Colobus_angolensis_palliatus
ENSECAG00000008746	-	100	97.262	ENSCGRG00001015265	EIF3C	100	97.262	Cricetulus_griseus_chok1gshd
ENSECAG00000008746	-	100	74.782	ENSCSEG00000017770	eif3c	100	74.891	Cynoglossus_semilaevis
ENSECAG00000008746	-	99	75.599	ENSCVAG00000005402	eif3c	98	81.818	Cyprinodon_variegatus
ENSECAG00000008746	-	99	76.092	ENSDARG00000016443	eif3c	98	75.952	Danio_rerio
ENSECAG00000008746	-	100	98.905	ENSDNOG00000031497	-	100	98.905	Dasypus_novemcinctus
ENSECAG00000008746	-	100	98.467	ENSDORG00000016471	Eif3c	100	98.467	Dipodomys_ordii
ENSECAG00000008746	-	98	50.998	FBgn0034258	eIF3c	95	51.106	Drosophila_melanogaster
ENSECAG00000008746	-	92	98.624	ENSETEG00000013527	-	92	98.624	Echinops_telfairi
ENSECAG00000008746	-	99	69.972	ENSEBUG00000001629	eif3c	94	69.806	Eptatretus_burgeri
ENSECAG00000008746	-	64	64.626	ENSEEUG00000000726	-	64	64.626	Erinaceus_europaeus
ENSECAG00000008746	-	87	97.368	ENSEEUG00000006148	-	100	97.368	Erinaceus_europaeus
ENSECAG00000008746	-	99	76.486	ENSELUG00000022257	eif3c	92	83.914	Esox_lucius
ENSECAG00000008746	-	100	98.905	ENSFCAG00000015782	-	100	98.905	Felis_catus
ENSECAG00000008746	-	100	98.028	ENSFDAG00000003588	-	100	98.028	Fukomys_damarensis
ENSECAG00000008746	-	99	76.790	ENSFHEG00000014154	EIF3C	93	83.987	Fundulus_heteroclitus
ENSECAG00000008746	-	97	76.968	ENSGMOG00000016885	eif3c	99	76.009	Gadus_morhua
ENSECAG00000008746	-	96	77.448	ENSGACG00000007652	eif3c	100	76.227	Gasterosteus_aculeatus
ENSECAG00000008746	-	92	83.707	ENSGAGG00000006666	-	100	83.825	Gopherus_agassizii
ENSECAG00000008746	-	54	96.911	ENSGGOG00000022677	-	100	96.911	Gorilla_gorilla
ENSECAG00000008746	-	99	96.260	ENSGGOG00000026919	EIF3C	100	98.521	Gorilla_gorilla
ENSECAG00000008746	-	100	98.357	ENSHGLG00000011445	EIF3C	100	98.357	Heterocephalus_glaber_female
ENSECAG00000008746	-	100	98.357	ENSHGLG00100000217	EIF3C	100	98.357	Heterocephalus_glaber_male
ENSECAG00000008746	-	99	75.679	ENSHCOG00000019694	eif3c	98	75.682	Hippocampus_comes
ENSECAG00000008746	-	99	75.610	ENSIPUG00000016878	eif3c	98	76.387	Ictalurus_punctatus
ENSECAG00000008746	-	100	98.905	ENSSTOG00000021278	-	100	98.905	Ictidomys_tridecemlineatus
ENSECAG00000008746	-	100	97.700	ENSJJAG00000012722	Eif3c	100	97.700	Jaculus_jaculus
ENSECAG00000008746	-	99	76.754	ENSKMAG00000021662	eif3c	97	76.247	Kryptolebias_marmoratus
ENSECAG00000008746	-	99	75.249	ENSLBEG00000023370	eif3c	99	74.649	Labrus_bergylta
ENSECAG00000008746	-	100	78.735	ENSLACG00000000770	eif3c	100	80.305	Latimeria_chalumnae
ENSECAG00000008746	-	100	98.357	ENSLAFG00000027426	-	100	98.357	Loxodonta_africana
ENSECAG00000008746	-	100	98.467	ENSMFAG00000041930	-	100	98.467	Macaca_fascicularis
ENSECAG00000008746	-	100	98.467	ENSMMUG00000011798	-	100	98.467	Macaca_mulatta
ENSECAG00000008746	-	100	98.467	ENSMNEG00000023915	-	100	98.467	Macaca_nemestrina
ENSECAG00000008746	-	100	98.467	ENSMLEG00000027529	-	100	98.467	Mandrillus_leucophaeus
ENSECAG00000008746	-	99	75.888	ENSMAMG00000012512	eif3c	95	84.500	Mastacembelus_armatus
ENSECAG00000008746	-	84	80.945	ENSMZEG00005013685	eif3c	92	80.945	Maylandia_zebra
ENSECAG00000008746	-	99	71.868	ENSMZEG00005013699	eif3c	98	83.636	Maylandia_zebra
ENSECAG00000008746	-	100	97.371	ENSMAUG00000010621	Eif3c	100	97.371	Mesocricetus_auratus
ENSECAG00000008746	-	100	98.686	ENSMICG00000036748	-	100	98.686	Microcebus_murinus
ENSECAG00000008746	-	100	94.962	ENSMOCG00000004204	Eif3c	100	94.962	Microtus_ochrogaster
ENSECAG00000008746	-	100	72.131	ENSMMOG00000001572	eif3c	94	82.673	Mola_mola
ENSECAG00000008746	-	100	95.077	ENSMODG00000015579	-	100	95.077	Monodelphis_domestica
ENSECAG00000008746	-	84	84.743	ENSMALG00000008907	eif3c	92	84.603	Monopterus_albus
ENSECAG00000008746	-	100	97.043	MGP_CAROLIEiJ_G0030451	Eif3c	100	97.043	Mus_caroli
ENSECAG00000008746	-	100	97.043	ENSMUSG00000030738	Eif3c	100	97.043	Mus_musculus
ENSECAG00000008746	-	100	96.605	MGP_PahariEiJ_G0013661	Eif3c	100	96.605	Mus_pahari
ENSECAG00000008746	-	100	97.043	MGP_SPRETEiJ_G0031565	Eif3c	100	97.043	Mus_spretus
ENSECAG00000008746	-	96	98.636	ENSMPUG00000012732	-	100	98.636	Mustela_putorius_furo
ENSECAG00000008746	-	100	97.700	ENSMLUG00000015558	-	100	97.700	Myotis_lucifugus
ENSECAG00000008746	-	100	98.357	ENSNGAG00000007177	-	100	98.357	Nannospalax_galili
ENSECAG00000008746	-	93	87.273	ENSNGAG00000010901	-	98	87.273	Nannospalax_galili
ENSECAG00000008746	-	100	83.279	ENSNLEG00000001425	-	91	93.333	Nomascus_leucogenys
ENSECAG00000008746	-	89	64.557	ENSMEUG00000005317	-	100	62.025	Notamacropus_eugenii
ENSECAG00000008746	-	100	78.033	ENSMEUG00000009939	-	99	78.057	Notamacropus_eugenii
ENSECAG00000008746	-	100	98.467	ENSOPRG00000000931	-	100	98.467	Ochotona_princeps
ENSECAG00000008746	-	100	98.138	ENSODEG00000013508	-	100	98.138	Octodon_degus
ENSECAG00000008746	-	63	77.315	ENSONIG00000011434	eif3c	99	63.366	Oreochromis_niloticus
ENSECAG00000008746	-	100	93.032	ENSOANG00000011410	-	99	93.032	Ornithorhynchus_anatinus
ENSECAG00000008746	-	100	99.014	ENSOCUG00000022489	-	100	99.014	Oryctolagus_cuniculus
ENSECAG00000008746	-	98	76.257	ENSORLG00000006318	eif3c	98	72.819	Oryzias_latipes
ENSECAG00000008746	-	98	76.257	ENSORLG00020015713	eif3c	96	83.051	Oryzias_latipes_hni
ENSECAG00000008746	-	97	77.485	ENSORLG00015013772	eif3c	97	74.614	Oryzias_latipes_hsok
ENSECAG00000008746	-	100	74.866	ENSOMEG00000020450	eif3c	100	74.544	Oryzias_melastigma
ENSECAG00000008746	-	100	98.357	ENSOGAG00000012737	-	100	98.357	Otolemur_garnettii
ENSECAG00000008746	-	100	98.686	ENSOARG00000002892	-	100	98.686	Ovis_aries
ENSECAG00000008746	-	100	98.905	ENSPPRG00000012336	-	100	98.905	Panthera_pardus
ENSECAG00000008746	-	100	98.905	ENSPTIG00000011712	-	100	98.905	Panthera_tigris_altaica
ENSECAG00000008746	-	100	98.467	ENSPANG00000021151	-	100	98.467	Papio_anubis
ENSECAG00000008746	-	99	76.906	ENSPKIG00000002049	eif3c	98	77.560	Paramormyrops_kingsleyae
ENSECAG00000008746	-	89	84.909	ENSPMGG00000005409	eif3c	94	84.909	Periophthalmus_magnuspinnatus
ENSECAG00000008746	-	100	95.838	ENSPEMG00000010899	Eif3c	100	95.838	Peromyscus_maniculatus_bairdii
ENSECAG00000008746	-	100	95.186	ENSPCIG00000025206	-	100	95.186	Phascolarctos_cinereus
ENSECAG00000008746	-	99	75.761	ENSPFOG00000004476	eif3c	98	75.652	Poecilia_formosa
ENSECAG00000008746	-	100	71.913	ENSPLAG00000017480	eif3c	93	83.748	Poecilia_latipinna
ENSECAG00000008746	-	99	76.387	ENSPMEG00000019512	eif3c	98	75.734	Poecilia_mexicana
ENSECAG00000008746	-	100	75.741	ENSPREG00000023139	eif3c	96	63.229	Poecilia_reticulata
ENSECAG00000008746	-	100	95.290	ENSPPYG00000007227	-	100	95.400	Pongo_abelii
ENSECAG00000008746	-	66	99.002	ENSPCAG00000012710	-	100	99.002	Procavia_capensis
ENSECAG00000008746	-	100	99.124	ENSPCOG00000019289	-	100	99.124	Propithecus_coquereli
ENSECAG00000008746	-	100	98.576	ENSPVAG00000005804	-	100	98.576	Pteropus_vampyrus
ENSECAG00000008746	-	71	69.079	ENSPNYG00000016530	eif3c	81	80.606	Pundamilia_nyererei
ENSECAG00000008746	-	99	76.805	ENSPNAG00000024040	eif3c	93	83.389	Pygocentrus_nattereri
ENSECAG00000008746	-	100	96.714	ENSRNOG00000018761	Eif3c	100	96.714	Rattus_norvegicus
ENSECAG00000008746	-	97	98.414	ENSRBIG00000044009	-	98	95.982	Rhinopithecus_bieti
ENSECAG00000008746	-	100	98.467	ENSRROG00000043626	-	100	98.467	Rhinopithecus_roxellana
ENSECAG00000008746	-	77	31.181	YMR309C	-	81	30.515	Saccharomyces_cerevisiae
ENSECAG00000008746	-	100	98.248	ENSSBOG00000032155	-	100	98.248	Saimiri_boliviensis_boliviensis
ENSECAG00000008746	-	96	94.677	ENSSHAG00000011808	-	100	94.677	Sarcophilus_harrisii
ENSECAG00000008746	-	99	76.066	ENSSFOG00015021823	eif3c	98	76.201	Scleropages_formosus
ENSECAG00000008746	-	97	77.259	ENSSMAG00000016638	eif3c	97	76.854	Scophthalmus_maximus
ENSECAG00000008746	-	97	79.416	ENSSDUG00000023117	eif3c	98	76.580	Seriola_dumerili
ENSECAG00000008746	-	99	76.253	ENSSLDG00000009706	eif3c	93	83.824	Seriola_lalandi_dorsalis
ENSECAG00000008746	-	100	83.934	ENSSPUG00000016470	-	100	85.027	Sphenodon_punctatus
ENSECAG00000008746	-	100	76.196	ENSSPAG00000000426	eif3c	100	76.304	Stegastes_partitus
ENSECAG00000008746	-	100	99.014	ENSSSCG00000034927	-	100	99.014	Sus_scrofa
ENSECAG00000008746	-	99	74.169	ENSTRUG00000008951	eif3c	99	74.812	Takifugu_rubripes
ENSECAG00000008746	-	100	74.022	ENSTNIG00000015210	eif3c	100	74.783	Tetraodon_nigroviridis
ENSECAG00000008746	-	100	98.576	ENSTTRG00000005880	-	100	98.576	Tursiops_truncatus
ENSECAG00000008746	-	72	99.542	ENSUAMG00000001127	-	91	100.000	Ursus_americanus
ENSECAG00000008746	-	100	99.233	ENSUMAG00000010927	-	100	99.233	Ursus_maritimus
ENSECAG00000008746	-	100	97.928	ENSVVUG00000025970	-	100	97.700	Vulpes_vulpes
ENSECAG00000008746	-	100	78.402	ENSXETG00000002941	eif3c	100	78.964	Xenopus_tropicalis
ENSECAG00000008746	-	100	75.676	ENSXMAG00000013796	eif3c	100	75.270	Xiphophorus_maculatus