EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSECAG00000008760 (Gene tree)
Gene ID: 100064782
Gene Symbol: RAD54L
Alias: -
Full Name: RAD54 like
Gene Type: protein_coding
Species: Equus_caballus
Status: putative
Strand: Minus strand
Length: 25239 bases
Position: chr2:12272908-12298146
Accession: 50494
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSECAP00000023919	ResIII	PF04851.15	7.2e-09	1	1
ENSECAP00000026136	ResIII	PF04851.15	1e-08	1	1
ENSECAP00000007026	ResIII	PF04851.15	1.1e-08	1	1
ENSECAP00000032556	ResIII	PF04851.15	1.2e-08	1	1
ENSECAP00000023919	DEAD	PF00270.29	1.9e-06	1	1
ENSECAP00000026136	DEAD	PF00270.29	2.7e-06	1	1
ENSECAP00000007026	DEAD	PF00270.29	3e-06	1	1
ENSECAP00000032556	DEAD	PF00270.29	3.2e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSECAT00000054466	-	2434	-	ENSECAP00000032556	773 (aa)	-	-
ENSECAT00000052480	-	2271	-	ENSECAP00000023919	687 (aa)	-	-
ENSECAT00000009261	-	2534	XM_023630682	ENSECAP00000007026	747 (aa)	XP_005607142	F6Y2M6
ENSECAT00000063997	-	2331	-	ENSECAP00000026136	707 (aa)	-	-

Gene Model

Click here to download ENSECAG00000008760's gene model file

Pathways

Pathway ID	Pathway Name	Source
ecb03440	Homologous recombination	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSECAG00000008760's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSECAG00000008760	RAD54L	87	44.547	ENSECAG00000021949	-	74	44.582
ENSECAG00000008760	RAD54L	72	30.196	ENSECAG00000008915	CHD1L	51	30.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSECAG00000008760	RAD54L	99	95.710	ENSG00000085999	RAD54L	100	100.000	Homo_sapiens
ENSECAG00000008760	RAD54L	99	77.524	ENSAPOG00000011643	rad54l	99	76.985	Acanthochromis_polyacanthus
ENSECAG00000008760	RAD54L	99	96.783	ENSAMEG00000013902	RAD54L	99	96.783	Ailuropoda_melanoleuca
ENSECAG00000008760	RAD54L	99	77.718	ENSACIG00000001939	rad54l	99	77.450	Amphilophus_citrinellus
ENSECAG00000008760	RAD54L	99	80.215	ENSAOCG00000017576	rad54l	99	79.677	Amphiprion_ocellaris
ENSECAG00000008760	RAD54L	95	82.615	ENSAPEG00000020658	rad54l	96	81.897	Amphiprion_percula
ENSECAG00000008760	RAD54L	96	83.432	ENSATEG00000006767	rad54l	99	82.403	Anabas_testudineus
ENSECAG00000008760	RAD54L	96	86.982	ENSAPLG00000006389	RAD54L	99	86.429	Anas_platyrhynchos
ENSECAG00000008760	RAD54L	99	84.520	ENSACAG00000002312	RAD54L	99	84.471	Anolis_carolinensis
ENSECAG00000008760	RAD54L	99	94.906	ENSANAG00000035439	RAD54L	99	94.906	Aotus_nancymaae
ENSECAG00000008760	RAD54L	99	77.591	ENSACLG00000018711	rad54l	99	77.311	Astatotilapia_calliptera
ENSECAG00000008760	RAD54L	99	80.429	ENSAMXG00000012777	rad54l	99	80.027	Astyanax_mexicanus
ENSECAG00000008760	RAD54L	99	96.252	ENSBTAG00000019901	RAD54L	99	96.252	Bos_taurus
ENSECAG00000008760	RAD54L	95	59.407	WBGene00004298	rad-54	84	58.537	Caenorhabditis_elegans
ENSECAG00000008760	RAD54L	99	95.013	ENSCJAG00000021080	RAD54L	97	95.013	Callithrix_jacchus
ENSECAG00000008760	RAD54L	100	98.387	ENSCAFG00000004272	RAD54L	100	96.519	Canis_familiaris
ENSECAG00000008760	RAD54L	99	98.387	ENSCAFG00020015066	RAD54L	99	96.515	Canis_lupus_dingo
ENSECAG00000008760	RAD54L	99	95.845	ENSCHIG00000020118	RAD54L	99	95.845	Capra_hircus
ENSECAG00000008760	RAD54L	99	93.496	ENSTSYG00000002032	RAD54L	99	93.307	Carlito_syrichta
ENSECAG00000008760	RAD54L	99	94.906	ENSCPOG00000006768	RAD54L	99	94.906	Cavia_porcellus
ENSECAG00000008760	RAD54L	99	95.576	ENSCCAG00000025783	RAD54L	99	95.576	Cebus_capucinus
ENSECAG00000008760	RAD54L	99	95.442	ENSCATG00000030589	RAD54L	99	95.442	Cercocebus_atys
ENSECAG00000008760	RAD54L	99	96.748	ENSCLAG00000004645	RAD54L	99	95.442	Chinchilla_lanigera
ENSECAG00000008760	RAD54L	99	95.576	ENSCSAG00000001229	RAD54L	99	95.576	Chlorocebus_sabaeus
ENSECAG00000008760	RAD54L	99	87.544	ENSCPBG00000005675	RAD54L	99	86.479	Chrysemys_picta_bellii
ENSECAG00000008760	RAD54L	95	67.153	ENSCING00000024456	-	99	62.725	Ciona_intestinalis
ENSECAG00000008760	RAD54L	95	67.160	ENSCSAVG00000010859	-	99	62.939	Ciona_savignyi
ENSECAG00000008760	RAD54L	99	95.308	ENSCANG00000034891	RAD54L	99	95.308	Colobus_angolensis_palliatus
ENSECAG00000008760	RAD54L	99	93.432	ENSCGRG00001014807	Rad54l	99	93.432	Cricetulus_griseus_chok1gshd
ENSECAG00000008760	RAD54L	99	93.432	ENSCGRG00000016038	Rad54l	99	93.432	Cricetulus_griseus_crigri
ENSECAG00000008760	RAD54L	99	79.363	ENSCSEG00000001983	rad54l	99	79.363	Cynoglossus_semilaevis
ENSECAG00000008760	RAD54L	92	79.921	ENSCVAG00000019561	rad54l	100	79.921	Cyprinodon_variegatus
ENSECAG00000008760	RAD54L	99	79.625	ENSDARG00000018623	rad54l	99	79.491	Danio_rerio
ENSECAG00000008760	RAD54L	99	95.122	ENSDNOG00000003395	RAD54L	99	94.370	Dasypus_novemcinctus
ENSECAG00000008760	RAD54L	99	83.733	ENSDORG00000002632	Rad54l	99	83.733	Dipodomys_ordii
ENSECAG00000008760	RAD54L	99	54.920	FBgn0002989	okr	95	54.920	Drosophila_melanogaster
ENSECAG00000008760	RAD54L	85	95.122	ENSETEG00000000550	RAD54L	78	95.122	Echinops_telfairi
ENSECAG00000008760	RAD54L	99	100.000	ENSEASG00005004511	RAD54L	99	99.598	Equus_asinus_asinus
ENSECAG00000008760	RAD54L	99	90.244	ENSEEUG00000008113	RAD54L	99	89.142	Erinaceus_europaeus
ENSECAG00000008760	RAD54L	99	80.507	ENSELUG00000002295	rad54l	99	80.507	Esox_lucius
ENSECAG00000008760	RAD54L	99	96.748	ENSFCAG00000003444	RAD54L	99	95.979	Felis_catus
ENSECAG00000008760	RAD54L	99	84.725	ENSFALG00000009480	RAD54L	99	84.605	Ficedula_albicollis
ENSECAG00000008760	RAD54L	99	97.561	ENSFDAG00000007806	RAD54L	99	95.040	Fukomys_damarensis
ENSECAG00000008760	RAD54L	66	77.876	ENSFHEG00000009824	rad54l	77	78.000	Fundulus_heteroclitus
ENSECAG00000008760	RAD54L	99	78.255	ENSGMOG00000014568	rad54l	99	78.255	Gadus_morhua
ENSECAG00000008760	RAD54L	99	84.853	ENSGALG00000010356	RAD54L	92	84.853	Gallus_gallus
ENSECAG00000008760	RAD54L	90	81.818	ENSGAFG00000011110	rad54l	100	79.204	Gambusia_affinis
ENSECAG00000008760	RAD54L	99	79.384	ENSGACG00000003111	rad54l	97	78.983	Gasterosteus_aculeatus
ENSECAG00000008760	RAD54L	99	86.988	ENSGAGG00000014089	RAD54L	96	85.925	Gopherus_agassizii
ENSECAG00000008760	RAD54L	99	95.576	ENSGGOG00000010602	RAD54L	99	95.576	Gorilla_gorilla
ENSECAG00000008760	RAD54L	99	77.871	ENSHBUG00000007793	rad54l	99	77.871	Haplochromis_burtoni
ENSECAG00000008760	RAD54L	99	95.174	ENSHGLG00000000753	RAD54L	99	95.174	Heterocephalus_glaber_female
ENSECAG00000008760	RAD54L	99	95.122	ENSHGLG00100016987	RAD54L	99	95.040	Heterocephalus_glaber_male
ENSECAG00000008760	RAD54L	96	81.361	ENSIPUG00000015999	rad54l	99	80.830	Ictalurus_punctatus
ENSECAG00000008760	RAD54L	100	95.047	ENSSTOG00000029125	RAD54L	100	95.047	Ictidomys_tridecemlineatus
ENSECAG00000008760	RAD54L	99	87.228	ENSJJAG00000000235	-	99	87.083	Jaculus_jaculus
ENSECAG00000008760	RAD54L	99	78.091	ENSKMAG00000009944	rad54l	99	78.091	Kryptolebias_marmoratus
ENSECAG00000008760	RAD54L	99	80.108	ENSLBEG00000014617	rad54l	99	81.752	Labrus_bergylta
ENSECAG00000008760	RAD54L	99	80.831	ENSLOCG00000004144	rad54l	100	82.344	Lepisosteus_oculatus
ENSECAG00000008760	RAD54L	99	96.250	ENSLAFG00000007583	RAD54L	99	96.107	Loxodonta_africana
ENSECAG00000008760	RAD54L	100	95.448	ENSMFAG00000031241	RAD54L	100	95.448	Macaca_fascicularis
ENSECAG00000008760	RAD54L	100	95.448	ENSMMUG00000011568	RAD54L	100	95.448	Macaca_mulatta
ENSECAG00000008760	RAD54L	100	95.448	ENSMNEG00000038562	RAD54L	100	95.448	Macaca_nemestrina
ENSECAG00000008760	RAD54L	99	95.576	ENSMLEG00000038145	RAD54L	99	95.576	Mandrillus_leucophaeus
ENSECAG00000008760	RAD54L	97	81.698	ENSMAMG00000022180	rad54l	100	81.672	Mastacembelus_armatus
ENSECAG00000008760	RAD54L	99	77.171	ENSMZEG00005018081	rad54l	99	77.171	Maylandia_zebra
ENSECAG00000008760	RAD54L	99	84.832	ENSMGAG00000010634	RAD54L	99	84.832	Meleagris_gallopavo
ENSECAG00000008760	RAD54L	99	93.298	ENSMAUG00000020076	Rad54l	99	93.298	Mesocricetus_auratus
ENSECAG00000008760	RAD54L	100	95.448	ENSMICG00000003266	RAD54L	100	95.448	Microcebus_murinus
ENSECAG00000008760	RAD54L	99	94.102	ENSMOCG00000001778	Rad54l	99	94.102	Microtus_ochrogaster
ENSECAG00000008760	RAD54L	99	76.139	ENSMALG00000021148	rad54l	99	76.005	Monopterus_albus
ENSECAG00000008760	RAD54L	99	96.748	MGP_CAROLIEiJ_G0026325	Rad54l	99	89.831	Mus_caroli
ENSECAG00000008760	RAD54L	99	95.122	ENSMUSG00000028702	Rad54l	99	94.504	Mus_musculus
ENSECAG00000008760	RAD54L	99	94.370	MGP_PahariEiJ_G0028657	Rad54l	99	94.370	Mus_pahari
ENSECAG00000008760	RAD54L	99	95.122	MGP_SPRETEiJ_G0027297	Rad54l	99	94.638	Mus_spretus
ENSECAG00000008760	RAD54L	99	96.748	ENSMPUG00000012883	RAD54L	99	95.845	Mustela_putorius_furo
ENSECAG00000008760	RAD54L	99	97.047	ENSMLUG00000003763	RAD54L	99	97.047	Myotis_lucifugus
ENSECAG00000008760	RAD54L	99	93.029	ENSNGAG00000024213	Rad54l	99	93.029	Nannospalax_galili
ENSECAG00000008760	RAD54L	99	95.040	ENSNLEG00000016548	RAD54L	99	95.040	Nomascus_leucogenys
ENSECAG00000008760	RAD54L	96	85.355	ENSMEUG00000006793	RAD54L	99	85.355	Notamacropus_eugenii
ENSECAG00000008760	RAD54L	90	94.077	ENSOPRG00000016016	RAD54L	90	94.077	Ochotona_princeps
ENSECAG00000008760	RAD54L	99	95.576	ENSODEG00000008519	RAD54L	99	95.576	Octodon_degus
ENSECAG00000008760	RAD54L	99	77.078	ENSONIG00000007659	rad54l	99	76.944	Oreochromis_niloticus
ENSECAG00000008760	RAD54L	99	94.638	ENSOCUG00000005229	RAD54L	99	94.638	Oryctolagus_cuniculus
ENSECAG00000008760	RAD54L	99	77.869	ENSORLG00000002958	rad54l	99	77.718	Oryzias_latipes
ENSECAG00000008760	RAD54L	99	78.255	ENSORLG00020006554	rad54l	99	81.630	Oryzias_latipes_hni
ENSECAG00000008760	RAD54L	99	77.987	ENSORLG00015002907	rad54l	99	77.852	Oryzias_latipes_hsok
ENSECAG00000008760	RAD54L	99	78.523	ENSOMEG00000007770	rad54l	99	78.389	Oryzias_melastigma
ENSECAG00000008760	RAD54L	99	95.588	ENSOARG00000002264	RAD54L	99	95.588	Ovis_aries
ENSECAG00000008760	RAD54L	99	95.710	ENSPPAG00000031222	RAD54L	99	95.710	Pan_paniscus
ENSECAG00000008760	RAD54L	99	96.748	ENSPPRG00000010317	RAD54L	99	95.979	Panthera_pardus
ENSECAG00000008760	RAD54L	99	96.748	ENSPTIG00000012200	RAD54L	99	95.979	Panthera_tigris_altaica
ENSECAG00000008760	RAD54L	99	95.576	ENSPTRG00000000689	RAD54L	99	95.576	Pan_troglodytes
ENSECAG00000008760	RAD54L	99	95.576	ENSPANG00000016295	RAD54L	99	95.576	Papio_anubis
ENSECAG00000008760	RAD54L	99	76.747	ENSPKIG00000016172	rad54l	99	76.478	Paramormyrops_kingsleyae
ENSECAG00000008760	RAD54L	98	87.703	ENSPSIG00000003258	RAD54L	99	86.585	Pelodiscus_sinensis
ENSECAG00000008760	RAD54L	99	75.335	ENSPMGG00000016335	rad54l	99	75.335	Periophthalmus_magnuspinnatus
ENSECAG00000008760	RAD54L	99	95.161	ENSPEMG00000011422	Rad54l	99	93.968	Peromyscus_maniculatus_bairdii
ENSECAG00000008760	RAD54L	99	71.162	ENSPMAG00000007719	rad54l	99	71.162	Petromyzon_marinus
ENSECAG00000008760	RAD54L	99	88.078	ENSPCIG00000029032	RAD54L	99	87.802	Phascolarctos_cinereus
ENSECAG00000008760	RAD54L	87	82.658	ENSPFOG00000013732	rad54l	99	82.092	Poecilia_formosa
ENSECAG00000008760	RAD54L	86	80.488	ENSPLAG00000023416	rad54l	99	80.488	Poecilia_latipinna
ENSECAG00000008760	RAD54L	90	81.818	ENSPMEG00000008299	rad54l	100	79.646	Poecilia_mexicana
ENSECAG00000008760	RAD54L	99	77.758	ENSPREG00000019955	rad54l	99	77.480	Poecilia_reticulata
ENSECAG00000008760	RAD54L	100	94.760	ENSPPYG00000001398	RAD54L	100	95.187	Pongo_abelii
ENSECAG00000008760	RAD54L	80	91.748	ENSPCAG00000005323	RAD54L	80	91.748	Procavia_capensis
ENSECAG00000008760	RAD54L	99	95.710	ENSPCOG00000015423	RAD54L	99	95.710	Propithecus_coquereli
ENSECAG00000008760	RAD54L	99	77.731	ENSPNYG00000002942	rad54l	99	77.451	Pundamilia_nyererei
ENSECAG00000008760	RAD54L	99	79.625	ENSPNAG00000012483	rad54l	99	79.625	Pygocentrus_nattereri
ENSECAG00000008760	RAD54L	99	94.309	ENSRNOG00000013148	Rad54l	99	93.566	Rattus_norvegicus
ENSECAG00000008760	RAD54L	99	95.308	ENSRBIG00000043495	RAD54L	99	95.308	Rhinopithecus_bieti
ENSECAG00000008760	RAD54L	99	95.442	ENSRROG00000020844	RAD54L	99	95.442	Rhinopithecus_roxellana
ENSECAG00000008760	RAD54L	84	48.142	YGL163C	RAD54	71	48.615	Saccharomyces_cerevisiae
ENSECAG00000008760	RAD54L	99	95.576	ENSSBOG00000024672	RAD54L	99	95.576	Saimiri_boliviensis_boliviensis
ENSECAG00000008760	RAD54L	99	87.867	ENSSHAG00000000110	RAD54L	99	87.600	Sarcophilus_harrisii
ENSECAG00000008760	RAD54L	99	79.893	ENSSDUG00000019147	rad54l	99	79.625	Seriola_dumerili
ENSECAG00000008760	RAD54L	99	81.586	ENSSLDG00000012330	rad54l	99	81.586	Seriola_lalandi_dorsalis
ENSECAG00000008760	RAD54L	83	89.567	ENSSARG00000006689	RAD54L	100	89.567	Sorex_araneus
ENSECAG00000008760	RAD54L	99	79.195	ENSSPAG00000011016	rad54l	99	79.195	Stegastes_partitus
ENSECAG00000008760	RAD54L	99	95.710	ENSSSCG00000003905	RAD54L	99	95.710	Sus_scrofa
ENSECAG00000008760	RAD54L	99	84.369	ENSTGUG00000008233	RAD54L	99	84.203	Taeniopygia_guttata
ENSECAG00000008760	RAD54L	99	78.873	ENSTRUG00000008410	rad54l	99	78.873	Takifugu_rubripes
ENSECAG00000008760	RAD54L	99	75.302	ENSTNIG00000004716	rad54l	99	75.510	Tetraodon_nigroviridis
ENSECAG00000008760	RAD54L	99	87.534	ENSTTRG00000006315	RAD54L	92	95.122	Tursiops_truncatus
ENSECAG00000008760	RAD54L	99	96.226	ENSUAMG00000011824	RAD54L	99	96.226	Ursus_americanus
ENSECAG00000008760	RAD54L	99	95.886	ENSUMAG00000023603	RAD54L	99	95.013	Ursus_maritimus
ENSECAG00000008760	RAD54L	100	97.581	ENSVVUG00000007201	RAD54L	100	96.519	Vulpes_vulpes
ENSECAG00000008760	RAD54L	96	78.940	ENSXETG00000004369	rad54l	99	77.747	Xenopus_tropicalis
ENSECAG00000008760	RAD54L	60	75.728	ENSXCOG00000016028	rad54l	80	79.945	Xiphophorus_couchianus