EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSECAG00000009007 (Gene tree)
Gene ID: 100050980
Gene Symbol: RIOK1
Alias: -
Full Name: RIO kinase 1
Gene Type: protein_coding
Species: Equus_caballus
Status: putative
Strand: Plus strand
Length: 23085 bases
Position: chr20:7994844-8017928
Accession: 49348
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSECAP00000028960	RIO1	PF01163.22	1.6e-77	1	1
ENSECAP00000007304	RIO1	PF01163.22	1.6e-77	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSECAT00000057846	-	2414	-	ENSECAP00000028960	567 (aa)	-	-
ENSECAT00000009574	-	1764	-	ENSECAP00000007304	568 (aa)	XP_001490410	F6XB71

Gene Model

Click here to download ENSECAG00000009007's gene model file

Pathways

Pathway ID	Pathway Name	Source
ecb03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSECAG00000009007's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSECAG00000009007	RIOK1	66	39.535	ENSECAG00000009028	RIOK3	63	42.169

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSECAG00000009007	RIOK1	100	89.437	ENSG00000124784	RIOK1	100	89.437	Homo_sapiens
ENSECAG00000009007	RIOK1	57	67.901	ENSAPOG00000015632	riok1	99	67.901	Acanthochromis_polyacanthus
ENSECAG00000009007	RIOK1	100	90.861	ENSAMEG00000017367	RIOK1	100	91.037	Ailuropoda_melanoleuca
ENSECAG00000009007	RIOK1	88	70.600	ENSACIG00000003735	riok1	87	71.487	Amphilophus_citrinellus
ENSECAG00000009007	RIOK1	99	66.845	ENSAOCG00000011818	riok1	100	65.845	Amphiprion_ocellaris
ENSECAG00000009007	RIOK1	99	66.488	ENSAPEG00000001345	riok1	100	65.905	Amphiprion_percula
ENSECAG00000009007	RIOK1	82	71.490	ENSATEG00000006594	riok1	99	71.490	Anabas_testudineus
ENSECAG00000009007	RIOK1	84	81.211	ENSAPLG00000004196	RIOK1	100	82.463	Anas_platyrhynchos
ENSECAG00000009007	RIOK1	100	76.883	ENSACAG00000000695	RIOK1	100	76.883	Anolis_carolinensis
ENSECAG00000009007	RIOK1	100	78.521	ENSANAG00000023777	RIOK1	100	80.282	Aotus_nancymaae
ENSECAG00000009007	RIOK1	99	65.608	ENSACLG00000015799	riok1	99	65.263	Astatotilapia_calliptera
ENSECAG00000009007	RIOK1	99	68.966	ENSAMXG00000015286	riok1	84	75.407	Astyanax_mexicanus
ENSECAG00000009007	RIOK1	100	89.085	ENSBTAG00000013821	RIOK1	100	89.085	Bos_taurus
ENSECAG00000009007	RIOK1	78	47.903	WBGene00019698	riok-1	85	47.357	Caenorhabditis_elegans
ENSECAG00000009007	RIOK1	100	87.676	ENSCJAG00000042960	RIOK1	100	89.613	Callithrix_jacchus
ENSECAG00000009007	RIOK1	100	89.631	ENSCAFG00000009563	RIOK1	100	90.158	Canis_familiaris
ENSECAG00000009007	RIOK1	97	89.071	ENSCAFG00020013233	RIOK1	98	89.071	Canis_lupus_dingo
ENSECAG00000009007	RIOK1	100	88.732	ENSCHIG00000001534	RIOK1	100	88.732	Capra_hircus
ENSECAG00000009007	RIOK1	66	89.125	ENSTSYG00000011368	RIOK1	100	92.966	Carlito_syrichta
ENSECAG00000009007	RIOK1	79	88.000	ENSCAPG00000008489	RIOK1	100	88.147	Cavia_aperea
ENSECAG00000009007	RIOK1	98	84.353	ENSCPOG00000009882	RIOK1	100	84.912	Cavia_porcellus
ENSECAG00000009007	RIOK1	100	88.380	ENSCCAG00000024061	RIOK1	100	90.141	Cebus_capucinus
ENSECAG00000009007	RIOK1	100	87.852	ENSCATG00000001548	RIOK1	100	89.613	Cercocebus_atys
ENSECAG00000009007	RIOK1	100	88.225	ENSCLAG00000003522	RIOK1	100	88.401	Chinchilla_lanigera
ENSECAG00000009007	RIOK1	95	87.037	ENSCSAG00000007396	RIOK1	99	88.148	Chlorocebus_sabaeus
ENSECAG00000009007	RIOK1	85	80.503	ENSCHOG00000001873	RIOK1	85	80.503	Choloepus_hoffmanni
ENSECAG00000009007	RIOK1	99	72.968	ENSCPBG00000008685	RIOK1	97	72.438	Chrysemys_picta_bellii
ENSECAG00000009007	RIOK1	100	88.028	ENSCANG00000032919	RIOK1	100	89.789	Colobus_angolensis_palliatus
ENSECAG00000009007	RIOK1	100	80.844	ENSCGRG00001018868	Riok1	100	80.458	Cricetulus_griseus_chok1gshd
ENSECAG00000009007	RIOK1	100	80.844	ENSCGRG00000008015	Riok1	100	80.458	Cricetulus_griseus_crigri
ENSECAG00000009007	RIOK1	88	50.797	ENSCSEG00000015014	riok1	85	51.335	Cynoglossus_semilaevis
ENSECAG00000009007	RIOK1	57	64.832	ENSCVAG00000011291	riok1	99	64.832	Cyprinodon_variegatus
ENSECAG00000009007	RIOK1	99	67.895	ENSDARG00000016399	riok1	100	68.421	Danio_rerio
ENSECAG00000009007	RIOK1	100	86.387	ENSDNOG00000015813	RIOK1	100	86.736	Dasypus_novemcinctus
ENSECAG00000009007	RIOK1	100	87.544	ENSDORG00000008530	Riok1	100	87.544	Dipodomys_ordii
ENSECAG00000009007	RIOK1	77	53.556	FBgn0036187	RIOK1	82	52.953	Drosophila_melanogaster
ENSECAG00000009007	RIOK1	100	84.155	ENSETEG00000020273	RIOK1	100	83.451	Echinops_telfairi
ENSECAG00000009007	RIOK1	99	60.777	ENSEBUG00000013672	riok1	85	67.551	Eptatretus_burgeri
ENSECAG00000009007	RIOK1	100	99.118	ENSEASG00005012032	RIOK1	100	99.118	Equus_asinus_asinus
ENSECAG00000009007	RIOK1	78	76.364	ENSEEUG00000007123	RIOK1	100	76.364	Erinaceus_europaeus
ENSECAG00000009007	RIOK1	99	64.888	ENSELUG00000017029	riok1	99	66.028	Esox_lucius
ENSECAG00000009007	RIOK1	100	88.287	ENSFCAG00000027290	RIOK1	100	89.510	Felis_catus
ENSECAG00000009007	RIOK1	100	76.522	ENSFALG00000013244	RIOK1	100	76.696	Ficedula_albicollis
ENSECAG00000009007	RIOK1	100	88.049	ENSFDAG00000019139	RIOK1	100	87.873	Fukomys_damarensis
ENSECAG00000009007	RIOK1	68	76.684	ENSFHEG00000021419	riok1	85	76.684	Fundulus_heteroclitus
ENSECAG00000009007	RIOK1	73	69.807	ENSGMOG00000018668	riok1	92	72.010	Gadus_morhua
ENSECAG00000009007	RIOK1	58	77.064	ENSGALG00000012795	RIOK1	100	77.481	Gallus_gallus
ENSECAG00000009007	RIOK1	84	61.506	ENSGAFG00000004091	riok1	79	62.343	Gambusia_affinis
ENSECAG00000009007	RIOK1	97	64.065	ENSGACG00000002496	riok1	91	73.585	Gasterosteus_aculeatus
ENSECAG00000009007	RIOK1	82	79.095	ENSGAGG00000002262	RIOK1	98	78.664	Gopherus_agassizii
ENSECAG00000009007	RIOK1	100	73.239	ENSGGOG00000011037	RIOK1	100	74.472	Gorilla_gorilla
ENSECAG00000009007	RIOK1	100	83.656	ENSHGLG00000008699	RIOK1	100	83.656	Heterocephalus_glaber_female
ENSECAG00000009007	RIOK1	100	83.831	ENSHGLG00100008188	RIOK1	100	84.359	Heterocephalus_glaber_male
ENSECAG00000009007	RIOK1	88	70.000	ENSHCOG00000013275	riok1	88	71.757	Hippocampus_comes
ENSECAG00000009007	RIOK1	99	67.944	ENSIPUG00000003290	riok1	100	68.804	Ictalurus_punctatus
ENSECAG00000009007	RIOK1	100	88.928	ENSSTOG00000009289	RIOK1	100	89.279	Ictidomys_tridecemlineatus
ENSECAG00000009007	RIOK1	100	86.292	ENSJJAG00000015152	Riok1	100	86.292	Jaculus_jaculus
ENSECAG00000009007	RIOK1	68	75.835	ENSKMAG00000019378	riok1	99	75.835	Kryptolebias_marmoratus
ENSECAG00000009007	RIOK1	88	71.142	ENSLBEG00000016650	riok1	86	72.245	Labrus_bergylta
ENSECAG00000009007	RIOK1	100	66.609	ENSLACG00000000300	RIOK1	100	65.411	Latimeria_chalumnae
ENSECAG00000009007	RIOK1	99	70.899	ENSLOCG00000011728	riok1	99	71.076	Lepisosteus_oculatus
ENSECAG00000009007	RIOK1	99	85.790	ENSLAFG00000005504	RIOK1	100	86.121	Loxodonta_africana
ENSECAG00000009007	RIOK1	100	87.324	ENSMFAG00000029990	RIOK1	100	89.085	Macaca_fascicularis
ENSECAG00000009007	RIOK1	100	87.148	ENSMMUG00000015577	RIOK1	100	88.908	Macaca_mulatta
ENSECAG00000009007	RIOK1	100	84.155	ENSMNEG00000034396	RIOK1	99	89.440	Macaca_nemestrina
ENSECAG00000009007	RIOK1	100	87.852	ENSMLEG00000026327	RIOK1	100	89.613	Mandrillus_leucophaeus
ENSECAG00000009007	RIOK1	98	65.171	ENSMAMG00000019557	riok1	86	73.278	Mastacembelus_armatus
ENSECAG00000009007	RIOK1	99	66.135	ENSMZEG00005019482	riok1	99	65.263	Maylandia_zebra
ENSECAG00000009007	RIOK1	100	74.301	ENSMGAG00000003816	RIOK1	100	75.571	Meleagris_gallopavo
ENSECAG00000009007	RIOK1	100	82.394	ENSMAUG00000012751	Riok1	100	81.514	Mesocricetus_auratus
ENSECAG00000009007	RIOK1	100	90.669	ENSMICG00000044301	RIOK1	84	90.669	Microcebus_murinus
ENSECAG00000009007	RIOK1	100	80.634	ENSMOCG00000017032	Riok1	100	80.458	Microtus_ochrogaster
ENSECAG00000009007	RIOK1	84	62.745	ENSMMOG00000020598	riok1	87	63.137	Mola_mola
ENSECAG00000009007	RIOK1	100	76.042	ENSMODG00000009964	RIOK1	100	78.070	Monodelphis_domestica
ENSECAG00000009007	RIOK1	88	63.327	ENSMALG00000019982	riok1	89	65.409	Monopterus_albus
ENSECAG00000009007	RIOK1	99	80.927	MGP_CAROLIEiJ_G0018439	Riok1	99	80.927	Mus_caroli
ENSECAG00000009007	RIOK1	99	80.427	ENSMUSG00000021428	Riok1	99	80.427	Mus_musculus
ENSECAG00000009007	RIOK1	99	80.392	MGP_PahariEiJ_G0019507	Riok1	99	80.392	Mus_pahari
ENSECAG00000009007	RIOK1	99	80.749	MGP_SPRETEiJ_G0019319	Riok1	99	80.749	Mus_spretus
ENSECAG00000009007	RIOK1	100	89.142	ENSMPUG00000000570	RIOK1	100	89.317	Mustela_putorius_furo
ENSECAG00000009007	RIOK1	100	91.388	ENSMLUG00000015312	RIOK1	100	91.037	Myotis_lucifugus
ENSECAG00000009007	RIOK1	100	87.676	ENSNGAG00000021734	Riok1	100	87.676	Nannospalax_galili
ENSECAG00000009007	RIOK1	70	78.338	ENSNBRG00000017489	riok1	80	75.177	Neolamprologus_brichardi
ENSECAG00000009007	RIOK1	100	80.106	ENSNLEG00000011621	RIOK1	100	80.106	Nomascus_leucogenys
ENSECAG00000009007	RIOK1	84	52.521	ENSMEUG00000006679	-	84	53.992	Notamacropus_eugenii
ENSECAG00000009007	RIOK1	65	84.906	ENSOPRG00000009524	RIOK1	100	84.906	Ochotona_princeps
ENSECAG00000009007	RIOK1	71	75.312	ENSODEG00000005663	RIOK1	100	75.312	Octodon_degus
ENSECAG00000009007	RIOK1	98	67.972	ENSONIG00000014010	riok1	98	68.271	Oreochromis_niloticus
ENSECAG00000009007	RIOK1	82	86.207	ENSOANG00000012553	RIOK1	100	86.207	Ornithorhynchus_anatinus
ENSECAG00000009007	RIOK1	100	85.062	ENSOCUG00000011824	RIOK1	100	85.062	Oryctolagus_cuniculus
ENSECAG00000009007	RIOK1	85	73.859	ENSORLG00000008221	riok1	86	74.274	Oryzias_latipes
ENSECAG00000009007	RIOK1	84	71.190	ENSORLG00020013838	riok1	60	72.443	Oryzias_latipes_hni
ENSECAG00000009007	RIOK1	98	66.964	ENSORLG00015009817	riok1	86	74.220	Oryzias_latipes_hsok
ENSECAG00000009007	RIOK1	98	65.709	ENSOMEG00000002758	riok1	78	73.389	Oryzias_melastigma
ENSECAG00000009007	RIOK1	100	78.709	ENSOGAG00000010192	RIOK1	100	78.547	Otolemur_garnettii
ENSECAG00000009007	RIOK1	100	89.261	ENSOARG00000017747	RIOK1	100	89.261	Ovis_aries
ENSECAG00000009007	RIOK1	100	78.993	ENSPPAG00000016349	RIOK1	100	88.073	Pan_paniscus
ENSECAG00000009007	RIOK1	100	88.811	ENSPPRG00000001932	RIOK1	100	89.161	Panthera_pardus
ENSECAG00000009007	RIOK1	100	89.161	ENSPTIG00000018545	RIOK1	100	89.510	Panthera_tigris_altaica
ENSECAG00000009007	RIOK1	100	89.261	ENSPTRG00000017700	RIOK1	100	89.261	Pan_troglodytes
ENSECAG00000009007	RIOK1	100	87.852	ENSPANG00000016522	RIOK1	100	89.613	Papio_anubis
ENSECAG00000009007	RIOK1	99	67.549	ENSPKIG00000006442	riok1	100	68.254	Paramormyrops_kingsleyae
ENSECAG00000009007	RIOK1	100	78.873	ENSPSIG00000006488	RIOK1	99	77.856	Pelodiscus_sinensis
ENSECAG00000009007	RIOK1	70	72.911	ENSPMGG00000017807	riok1	96	68.611	Periophthalmus_magnuspinnatus
ENSECAG00000009007	RIOK1	100	81.866	ENSPEMG00000017844	Riok1	100	81.690	Peromyscus_maniculatus_bairdii
ENSECAG00000009007	RIOK1	71	68.689	ENSPMAG00000006351	riok1	98	68.689	Petromyzon_marinus
ENSECAG00000009007	RIOK1	97	73.874	ENSPCIG00000012653	RIOK1	97	73.874	Phascolarctos_cinereus
ENSECAG00000009007	RIOK1	99	62.345	ENSPFOG00000011532	riok1	100	62.877	Poecilia_formosa
ENSECAG00000009007	RIOK1	99	62.832	ENSPLAG00000001341	riok1	100	62.877	Poecilia_latipinna
ENSECAG00000009007	RIOK1	99	62.345	ENSPMEG00000007710	riok1	100	63.233	Poecilia_mexicana
ENSECAG00000009007	RIOK1	99	62.877	ENSPREG00000009237	riok1	87	69.811	Poecilia_reticulata
ENSECAG00000009007	RIOK1	100	88.752	ENSPPYG00000016207	RIOK1	100	89.631	Pongo_abelii
ENSECAG00000009007	RIOK1	100	73.592	ENSPCAG00000007892	RIOK1	100	72.007	Procavia_capensis
ENSECAG00000009007	RIOK1	100	90.543	ENSPVAG00000014091	RIOK1	100	90.718	Pteropus_vampyrus
ENSECAG00000009007	RIOK1	58	70.336	ENSPNYG00000004465	riok1	100	71.254	Pundamilia_nyererei
ENSECAG00000009007	RIOK1	99	67.845	ENSPNAG00000015435	riok1	99	66.382	Pygocentrus_nattereri
ENSECAG00000009007	RIOK1	99	80.961	ENSRNOG00000014049	Riok1	100	85.345	Rattus_norvegicus
ENSECAG00000009007	RIOK1	100	87.676	ENSRBIG00000036685	RIOK1	100	89.437	Rhinopithecus_bieti
ENSECAG00000009007	RIOK1	100	87.852	ENSRROG00000036611	RIOK1	100	89.613	Rhinopithecus_roxellana
ENSECAG00000009007	RIOK1	59	41.848	YOR119C	RIO1	96	37.917	Saccharomyces_cerevisiae
ENSECAG00000009007	RIOK1	100	89.613	ENSSBOG00000012588	RIOK1	100	89.613	Saimiri_boliviensis_boliviensis
ENSECAG00000009007	RIOK1	85	80.453	ENSSHAG00000003091	RIOK1	93	79.466	Sarcophilus_harrisii
ENSECAG00000009007	RIOK1	99	68.206	ENSSFOG00015001035	riok1	99	65.411	Scleropages_formosus
ENSECAG00000009007	RIOK1	58	64.526	ENSSDUG00000007291	riok1	100	64.832	Seriola_dumerili
ENSECAG00000009007	RIOK1	98	65.350	ENSSLDG00000017657	riok1	99	66.068	Seriola_lalandi_dorsalis
ENSECAG00000009007	RIOK1	87	68.357	ENSSPUG00000007624	RIOK1	83	69.072	Sphenodon_punctatus
ENSECAG00000009007	RIOK1	99	67.736	ENSSPAG00000022710	riok1	100	67.380	Stegastes_partitus
ENSECAG00000009007	RIOK1	100	85.915	ENSSSCG00000001024	RIOK1	100	85.915	Sus_scrofa
ENSECAG00000009007	RIOK1	100	77.273	ENSTGUG00000002331	RIOK1	100	76.532	Taeniopygia_guttata
ENSECAG00000009007	RIOK1	74	62.708	ENSTRUG00000002854	riok1	98	63.027	Takifugu_rubripes
ENSECAG00000009007	RIOK1	52	62.752	ENSTRUG00000001575	-	100	62.752	Takifugu_rubripes
ENSECAG00000009007	RIOK1	99	61.458	ENSTNIG00000003078	riok1	99	61.404	Tetraodon_nigroviridis
ENSECAG00000009007	RIOK1	100	83.979	ENSTBEG00000016730	RIOK1	100	83.627	Tupaia_belangeri
ENSECAG00000009007	RIOK1	74	96.429	ENSTTRG00000017335	RIOK1	87	96.429	Tursiops_truncatus
ENSECAG00000009007	RIOK1	98	89.550	ENSUAMG00000003721	RIOK1	99	89.730	Ursus_americanus
ENSECAG00000009007	RIOK1	100	90.861	ENSUMAG00000018461	RIOK1	100	91.037	Ursus_maritimus
ENSECAG00000009007	RIOK1	70	88.316	ENSVPAG00000010813	-	73	88.316	Vicugna_pacos
ENSECAG00000009007	RIOK1	100	89.279	ENSVVUG00000005018	RIOK1	100	89.807	Vulpes_vulpes
ENSECAG00000009007	RIOK1	88	73.747	ENSXETG00000020436	riok1	86	74.795	Xenopus_tropicalis
ENSECAG00000009007	RIOK1	84	65.336	ENSXCOG00000000245	riok1	100	66.597	Xiphophorus_couchianus
ENSECAG00000009007	RIOK1	70	73.935	ENSXMAG00000014572	riok1	82	71.059	Xiphophorus_maculatus