EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSECAG00000009114 (Gene tree)
Gene ID: 100060250
Gene Symbol: TSR1
Alias: -
Full Name: TSR1%2C ribosome maturation factor
Gene Type: protein_coding
Species: Equus_caballus
Status: putative
Strand: Minus strand
Length: 9822 bases
Position: chr11:46200087-46209908
Accession: 24601
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSECAP00000042019	AARP2CN	PF08142.12	2.6e-21	1	1
ENSECAP00000007498	AARP2CN	PF08142.12	2.6e-21	1	1
ENSECAP00000043025	AARP2CN	PF08142.12	2.8e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSECAT00000042647	-	2394	-	ENSECAP00000043025	797 (aa)	-	-
ENSECAT00000035604	-	2409	-	ENSECAP00000042019	802 (aa)	-	-
ENSECAT00000009800	-	2415	-	ENSECAP00000007498	804 (aa)	XP_001504411	F6YAX8

Gene Model

Click here to download ENSECAG00000009114's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSECAG00000009114's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSECAG00000009114	TSR1	100	89.082	ENSG00000167721	TSR1	100	89.330	Homo_sapiens
ENSECAG00000009114	TSR1	99	55.168	ENSAPOG00000020891	tsr1	99	55.048	Acanthochromis_polyacanthus
ENSECAG00000009114	TSR1	100	90.541	ENSAMEG00000007599	TSR1	99	89.926	Ailuropoda_melanoleuca
ENSECAG00000009114	TSR1	99	57.090	ENSACIG00000007090	tsr1	99	57.230	Amphilophus_citrinellus
ENSECAG00000009114	TSR1	99	54.513	ENSAOCG00000023284	tsr1	99	54.897	Amphiprion_ocellaris
ENSECAG00000009114	TSR1	94	55.172	ENSAPEG00000008452	tsr1	100	55.712	Amphiprion_percula
ENSECAG00000009114	TSR1	99	54.545	ENSATEG00000021961	tsr1	99	55.502	Anabas_testudineus
ENSECAG00000009114	TSR1	92	69.314	ENSAPLG00000013422	TSR1	100	69.489	Anas_platyrhynchos
ENSECAG00000009114	TSR1	72	57.778	ENSACAG00000000859	TSR1	92	57.487	Anolis_carolinensis
ENSECAG00000009114	TSR1	100	89.303	ENSANAG00000031071	TSR1	100	88.930	Aotus_nancymaae
ENSECAG00000009114	TSR1	99	55.811	ENSACLG00000007595	tsr1	99	55.758	Astatotilapia_calliptera
ENSECAG00000009114	TSR1	51	49.517	ENSAMXG00000008470	tsr1	90	49.083	Astyanax_mexicanus
ENSECAG00000009114	TSR1	100	92.910	ENSBTAG00000004225	TSR1	100	92.910	Bos_taurus
ENSECAG00000009114	TSR1	97	38.742	WBGene00006497	tag-151	96	39.623	Caenorhabditis_elegans
ENSECAG00000009114	TSR1	100	89.677	ENSCJAG00000012456	TSR1	100	89.303	Callithrix_jacchus
ENSECAG00000009114	TSR1	100	91.553	ENSCAFG00000002106	-	100	91.553	Canis_familiaris
ENSECAG00000009114	TSR1	90	91.047	ENSCAFG00000019273	-	100	91.933	Canis_familiaris
ENSECAG00000009114	TSR1	100	90.932	ENSCAFG00020009728	TSR1	100	90.932	Canis_lupus_dingo
ENSECAG00000009114	TSR1	100	92.786	ENSCHIG00000023935	TSR1	100	92.786	Capra_hircus
ENSECAG00000009114	TSR1	100	89.925	ENSTSYG00000005468	TSR1	100	89.677	Carlito_syrichta
ENSECAG00000009114	TSR1	93	88.874	ENSCPOG00000014833	TSR1	99	88.874	Cavia_porcellus
ENSECAG00000009114	TSR1	93	90.483	ENSCCAG00000028962	TSR1	98	90.080	Cebus_capucinus
ENSECAG00000009114	TSR1	100	89.578	ENSCATG00000044262	TSR1	100	89.206	Cercocebus_atys
ENSECAG00000009114	TSR1	100	89.179	ENSCLAG00000005567	TSR1	100	88.806	Chinchilla_lanigera
ENSECAG00000009114	TSR1	100	89.578	ENSCSAG00000013788	TSR1	100	89.206	Chlorocebus_sabaeus
ENSECAG00000009114	TSR1	99	69.164	ENSCPBG00000020363	TSR1	97	70.173	Chrysemys_picta_bellii
ENSECAG00000009114	TSR1	97	46.509	ENSCING00000020658	-	99	46.442	Ciona_intestinalis
ENSECAG00000009114	TSR1	97	45.352	ENSCSAVG00000001875	-	100	44.862	Ciona_savignyi
ENSECAG00000009114	TSR1	100	79.653	ENSCANG00000033056	TSR1	100	79.156	Colobus_angolensis_palliatus
ENSECAG00000009114	TSR1	100	86.070	ENSCGRG00001023942	Tsr1	100	85.945	Cricetulus_griseus_chok1gshd
ENSECAG00000009114	TSR1	100	80.348	ENSCGRG00000013015	Tsr1	100	80.473	Cricetulus_griseus_crigri
ENSECAG00000009114	TSR1	99	55.043	ENSCSEG00000013009	tsr1	99	55.407	Cynoglossus_semilaevis
ENSECAG00000009114	TSR1	99	55.918	ENSCVAG00000000506	tsr1	99	56.204	Cyprinodon_variegatus
ENSECAG00000009114	TSR1	99	54.874	ENSDARG00000007744	tsr1	99	55.814	Danio_rerio
ENSECAG00000009114	TSR1	100	90.299	ENSDNOG00000004715	TSR1	100	90.672	Dasypus_novemcinctus
ENSECAG00000009114	TSR1	97	76.735	ENSDORG00000023234	-	100	76.735	Dipodomys_ordii
ENSECAG00000009114	TSR1	100	87.687	ENSDORG00000016371	-	100	87.687	Dipodomys_ordii
ENSECAG00000009114	TSR1	97	44.169	FBgn0037073	Tsr1	96	45.093	Drosophila_melanogaster
ENSECAG00000009114	TSR1	92	91.803	ENSETEG00000017534	TSR1	91	91.803	Echinops_telfairi
ENSECAG00000009114	TSR1	94	54.079	ENSEBUG00000013731	TSR1	98	53.101	Eptatretus_burgeri
ENSECAG00000009114	TSR1	100	99.378	ENSEASG00005009302	TSR1	97	99.378	Equus_asinus_asinus
ENSECAG00000009114	TSR1	99	54.897	ENSELUG00000020984	tsr1	95	55.018	Esox_lucius
ENSECAG00000009114	TSR1	100	91.915	ENSFCAG00000006313	TSR1	100	91.915	Felis_catus
ENSECAG00000009114	TSR1	99	69.951	ENSFALG00000006532	TSR1	99	70.567	Ficedula_albicollis
ENSECAG00000009114	TSR1	100	89.303	ENSFDAG00000006038	TSR1	100	89.677	Fukomys_damarensis
ENSECAG00000009114	TSR1	99	55.168	ENSFHEG00000003626	tsr1	99	55.409	Fundulus_heteroclitus
ENSECAG00000009114	TSR1	99	53.064	ENSGMOG00000010336	tsr1	99	53.317	Gadus_morhua
ENSECAG00000009114	TSR1	99	55.048	ENSGAFG00000012993	tsr1	99	55.811	Gambusia_affinis
ENSECAG00000009114	TSR1	99	55.025	ENSGACG00000010843	tsr1	99	55.270	Gasterosteus_aculeatus
ENSECAG00000009114	TSR1	99	70.050	ENSGAGG00000025619	-	99	69.938	Gopherus_agassizii
ENSECAG00000009114	TSR1	100	89.206	ENSGGOG00000001704	TSR1	100	89.578	Gorilla_gorilla
ENSECAG00000009114	TSR1	99	55.850	ENSHBUG00000017904	tsr1	100	56.667	Haplochromis_burtoni
ENSECAG00000009114	TSR1	100	90.299	ENSHGLG00000012806	-	100	90.299	Heterocephalus_glaber_female
ENSECAG00000009114	TSR1	97	79.949	ENSHGLG00000015688	-	99	79.049	Heterocephalus_glaber_female
ENSECAG00000009114	TSR1	100	90.299	ENSHGLG00100015392	TSR1	100	90.299	Heterocephalus_glaber_male
ENSECAG00000009114	TSR1	99	57.108	ENSHCOG00000001432	tsr1	99	56.984	Hippocampus_comes
ENSECAG00000009114	TSR1	99	55.181	ENSIPUG00000004618	tsr1	99	56.077	Ictalurus_punctatus
ENSECAG00000009114	TSR1	100	89.082	ENSSTOG00000011819	TSR1	100	89.082	Ictidomys_tridecemlineatus
ENSECAG00000009114	TSR1	92	80.894	ENSJJAG00000019505	Tsr1	95	80.054	Jaculus_jaculus
ENSECAG00000009114	TSR1	99	54.567	ENSKMAG00000005763	tsr1	99	54.358	Kryptolebias_marmoratus
ENSECAG00000009114	TSR1	99	55.235	ENSLBEG00000021823	tsr1	99	56.197	Labrus_bergylta
ENSECAG00000009114	TSR1	99	63.882	ENSLACG00000002197	TSR1	99	63.759	Latimeria_chalumnae
ENSECAG00000009114	TSR1	99	53.137	ENSLOCG00000006491	TSR1	98	52.276	Lepisosteus_oculatus
ENSECAG00000009114	TSR1	100	89.826	ENSMFAG00000021330	TSR1	100	89.454	Macaca_fascicularis
ENSECAG00000009114	TSR1	100	89.454	ENSMMUG00000017519	TSR1	100	89.082	Macaca_mulatta
ENSECAG00000009114	TSR1	100	89.454	ENSMNEG00000031382	TSR1	100	89.082	Macaca_nemestrina
ENSECAG00000009114	TSR1	100	89.454	ENSMLEG00000036733	TSR1	100	89.082	Mandrillus_leucophaeus
ENSECAG00000009114	TSR1	99	55.036	ENSMAMG00000017918	tsr1	99	54.436	Mastacembelus_armatus
ENSECAG00000009114	TSR1	99	55.971	ENSMZEG00005007477	tsr1	99	55.918	Maylandia_zebra
ENSECAG00000009114	TSR1	99	68.389	ENSMGAG00000005576	TSR1	99	68.796	Meleagris_gallopavo
ENSECAG00000009114	TSR1	100	92.413	ENSMICG00000012943	TSR1	100	92.413	Microcebus_murinus
ENSECAG00000009114	TSR1	100	86.460	ENSMOCG00000022764	Tsr1	100	87.329	Microtus_ochrogaster
ENSECAG00000009114	TSR1	99	55.746	ENSMMOG00000014280	tsr1	99	56.357	Mola_mola
ENSECAG00000009114	TSR1	100	79.503	ENSMODG00000010658	TSR1	100	79.379	Monodelphis_domestica
ENSECAG00000009114	TSR1	99	56.062	ENSMALG00000011681	tsr1	99	55.582	Monopterus_albus
ENSECAG00000009114	TSR1	100	86.194	MGP_CAROLIEiJ_G0016727	Tsr1	100	85.697	Mus_caroli
ENSECAG00000009114	TSR1	100	86.692	ENSMUSG00000038335	Tsr1	100	86.318	Mus_musculus
ENSECAG00000009114	TSR1	100	86.692	MGP_PahariEiJ_G0017864	Tsr1	100	86.194	Mus_pahari
ENSECAG00000009114	TSR1	100	86.692	MGP_SPRETEiJ_G0017570	Tsr1	100	86.194	Mus_spretus
ENSECAG00000009114	TSR1	82	91.311	ENSMPUG00000013000	TSR1	100	91.311	Mustela_putorius_furo
ENSECAG00000009114	TSR1	100	93.781	ENSMLUG00000003505	TSR1	100	93.781	Myotis_lucifugus
ENSECAG00000009114	TSR1	99	55.582	ENSNBRG00000020728	tsr1	99	55.529	Neolamprologus_brichardi
ENSECAG00000009114	TSR1	100	82.090	ENSNLEG00000017184	TSR1	100	83.209	Nomascus_leucogenys
ENSECAG00000009114	TSR1	100	72.829	ENSMEUG00000015828	TSR1	100	73.020	Notamacropus_eugenii
ENSECAG00000009114	TSR1	99	56.416	ENSONIG00000013131	tsr1	99	56.000	Oreochromis_niloticus
ENSECAG00000009114	TSR1	96	74.293	ENSOANG00000008637	TSR1	100	73.907	Ornithorhynchus_anatinus
ENSECAG00000009114	TSR1	100	89.925	ENSOCUG00000014256	TSR1	100	89.925	Oryctolagus_cuniculus
ENSECAG00000009114	TSR1	99	54.940	ENSORLG00000004926	tsr1	99	55.301	Oryzias_latipes
ENSECAG00000009114	TSR1	99	55.006	ENSORLG00020008792	tsr1	99	55.368	Oryzias_latipes_hni
ENSECAG00000009114	TSR1	99	54.819	ENSORLG00015013838	tsr1	99	55.181	Oryzias_latipes_hsok
ENSECAG00000009114	TSR1	99	54.940	ENSOMEG00000004830	tsr1	99	56.145	Oryzias_melastigma
ENSECAG00000009114	TSR1	100	89.149	ENSOGAG00000004492	TSR1	100	88.779	Otolemur_garnettii
ENSECAG00000009114	TSR1	100	92.662	ENSOARG00000015437	TSR1	97	92.662	Ovis_aries
ENSECAG00000009114	TSR1	100	89.206	ENSPPAG00000036355	TSR1	100	89.454	Pan_paniscus
ENSECAG00000009114	TSR1	100	91.791	ENSPPRG00000015519	-	100	91.791	Panthera_pardus
ENSECAG00000009114	TSR1	100	92.040	ENSPTIG00000010608	TSR1	100	92.040	Panthera_tigris_altaica
ENSECAG00000009114	TSR1	100	89.206	ENSPTRG00000008547	TSR1	100	89.454	Pan_troglodytes
ENSECAG00000009114	TSR1	100	86.228	ENSPANG00000024463	TSR1	100	85.732	Papio_anubis
ENSECAG00000009114	TSR1	99	55.446	ENSPKIG00000013972	tsr1	99	55.922	Paramormyrops_kingsleyae
ENSECAG00000009114	TSR1	88	69.165	ENSPSIG00000018258	TSR1	100	69.774	Pelodiscus_sinensis
ENSECAG00000009114	TSR1	99	56.807	ENSPMGG00000011577	tsr1	99	56.807	Periophthalmus_magnuspinnatus
ENSECAG00000009114	TSR1	100	85.821	ENSPEMG00000018033	Tsr1	100	85.448	Peromyscus_maniculatus_bairdii
ENSECAG00000009114	TSR1	100	78.784	ENSPCIG00000009357	TSR1	98	79.604	Phascolarctos_cinereus
ENSECAG00000009114	TSR1	99	55.177	ENSPFOG00000004483	TSR1	99	56.691	Poecilia_formosa
ENSECAG00000009114	TSR1	99	55.296	ENSPLAG00000022320	tsr1	99	55.836	Poecilia_latipinna
ENSECAG00000009114	TSR1	99	54.753	ENSPMEG00000004577	tsr1	99	55.769	Poecilia_mexicana
ENSECAG00000009114	TSR1	97	55.322	ENSPREG00000010354	tsr1	95	55.817	Poecilia_reticulata
ENSECAG00000009114	TSR1	100	81.235	ENSPPYG00000007792	TSR1	100	81.358	Pongo_abelii
ENSECAG00000009114	TSR1	53	90.698	ENSPCAG00000012973	-	72	90.698	Procavia_capensis
ENSECAG00000009114	TSR1	100	92.164	ENSPCOG00000017928	TSR1	100	92.164	Propithecus_coquereli
ENSECAG00000009114	TSR1	100	92.786	ENSPVAG00000002162	TSR1	100	92.413	Pteropus_vampyrus
ENSECAG00000009114	TSR1	99	55.932	ENSPNYG00000016163	tsr1	99	55.879	Pundamilia_nyererei
ENSECAG00000009114	TSR1	99	55.276	ENSPNAG00000008659	tsr1	99	54.916	Pygocentrus_nattereri
ENSECAG00000009114	TSR1	100	85.839	ENSRNOG00000002980	Tsr1	100	85.714	Rattus_norvegicus
ENSECAG00000009114	TSR1	100	89.330	ENSRBIG00000040016	TSR1	100	88.958	Rhinopithecus_bieti
ENSECAG00000009114	TSR1	100	89.206	ENSRROG00000030361	TSR1	100	88.834	Rhinopithecus_roxellana
ENSECAG00000009114	TSR1	96	30.446	YDL060W	-	98	30.025	Saccharomyces_cerevisiae
ENSECAG00000009114	TSR1	100	89.801	ENSSBOG00000020785	TSR1	100	89.801	Saimiri_boliviensis_boliviensis
ENSECAG00000009114	TSR1	100	77.571	ENSSHAG00000011394	TSR1	100	77.819	Sarcophilus_harrisii
ENSECAG00000009114	TSR1	99	56.760	ENSSFOG00015005455	tsr1	99	56.319	Scleropages_formosus
ENSECAG00000009114	TSR1	99	54.470	ENSSMAG00000009504	tsr1	99	55.193	Scophthalmus_maximus
ENSECAG00000009114	TSR1	99	56.010	ENSSDUG00000012074	tsr1	99	55.288	Seriola_dumerili
ENSECAG00000009114	TSR1	99	56.145	ENSSLDG00000002031	tsr1	99	55.422	Seriola_lalandi_dorsalis
ENSECAG00000009114	TSR1	100	77.985	ENSSARG00000000759	TSR1	100	77.985	Sorex_araneus
ENSECAG00000009114	TSR1	98	68.750	ENSSPUG00000007042	TSR1	99	67.405	Sphenodon_punctatus
ENSECAG00000009114	TSR1	99	54.796	ENSSPAG00000021951	tsr1	99	55.529	Stegastes_partitus
ENSECAG00000009114	TSR1	100	93.408	ENSSSCG00000038534	TSR1	100	93.408	Sus_scrofa
ENSECAG00000009114	TSR1	90	71.742	ENSTGUG00000005883	TSR1	99	71.742	Taeniopygia_guttata
ENSECAG00000009114	TSR1	99	56.987	ENSTRUG00000004665	tsr1	99	57.143	Takifugu_rubripes
ENSECAG00000009114	TSR1	99	56.740	ENSTNIG00000016196	tsr1	99	56.951	Tetraodon_nigroviridis
ENSECAG00000009114	TSR1	68	92.308	ENSTBEG00000015275	-	67	92.308	Tupaia_belangeri
ENSECAG00000009114	TSR1	100	93.284	ENSTTRG00000001177	TSR1	100	93.284	Tursiops_truncatus
ENSECAG00000009114	TSR1	100	91.022	ENSUAMG00000025160	TSR1	99	91.691	Ursus_americanus
ENSECAG00000009114	TSR1	97	90.793	ENSUMAG00000009294	TSR1	99	90.793	Ursus_maritimus
ENSECAG00000009114	TSR1	84	89.450	ENSVPAG00000000228	TSR1	100	89.450	Vicugna_pacos
ENSECAG00000009114	TSR1	100	91.056	ENSVVUG00000021767	TSR1	100	91.056	Vulpes_vulpes
ENSECAG00000009114	TSR1	99	60.565	ENSXETG00000023797	tsr1	100	61.467	Xenopus_tropicalis
ENSECAG00000009114	TSR1	99	55.951	ENSXCOG00000009635	tsr1	99	55.678	Xiphophorus_couchianus
ENSECAG00000009114	TSR1	99	55.327	ENSXMAG00000001397	tsr1	96	55.569	Xiphophorus_maculatus