EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSECAG00000009325 (Gene tree)
Gene ID: 100057347
Gene Symbol: CSTF2
Alias: -
Full Name: cleavage stimulation factor subunit 2
Gene Type: protein_coding
Species: Equus_caballus
Status: putative
Strand: Plus strand
Length: 21002 bases
Position: chrX:83661070-83682071
Accession: 16920
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSECAP00000007625	RRM_1	PF00076.22	2.3e-25	1	1
ENSECAP00000045447	RRM_1	PF00076.22	2.4e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSECAT00000009937	-	1737	XM_023634323	ENSECAP00000007625	577 (aa)	XP_023490091	F6WIH8
ENSECAT00000034397	-	1797	-	ENSECAP00000045447	597 (aa)	XP_023490090	UPI000C9DACC7

Gene Model

Click here to download ENSECAG00000009325's gene model file

Pathways

Pathway ID	Pathway Name	Source
ecb03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSECAG00000009325's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSECAG00000009325	CSTF2	99	69.668	ENSECAG00000004701	CSTF2T	99	69.984

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSECAG00000009325	CSTF2	100	96.985	ENSG00000101811	CSTF2	100	96.985	Homo_sapiens
ENSECAG00000009325	CSTF2	99	59.000	ENSAPOG00000005630	cstf2	97	58.361	Acanthochromis_polyacanthus
ENSECAG00000009325	CSTF2	100	96.523	ENSAMEG00000002082	CSTF2	100	96.523	Ailuropoda_melanoleuca
ENSECAG00000009325	CSTF2	99	56.110	ENSACIG00000012852	cstf2	97	57.315	Amphilophus_citrinellus
ENSECAG00000009325	CSTF2	99	60.172	ENSAOCG00000020905	cstf2	97	58.265	Amphiprion_ocellaris
ENSECAG00000009325	CSTF2	99	60.172	ENSAPEG00000006526	cstf2	97	58.361	Amphiprion_percula
ENSECAG00000009325	CSTF2	99	57.414	ENSATEG00000018186	cstf2	97	57.307	Anabas_testudineus
ENSECAG00000009325	CSTF2	97	79.117	ENSAPLG00000007255	CSTF2	98	78.824	Anas_platyrhynchos
ENSECAG00000009325	CSTF2	100	95.841	ENSANAG00000022342	CSTF2	100	95.841	Aotus_nancymaae
ENSECAG00000009325	CSTF2	81	93.548	ENSAMXG00000021477	cstf2	98	91.304	Astyanax_mexicanus
ENSECAG00000009325	CSTF2	100	95.841	ENSBTAG00000003547	CSTF2	100	95.841	Bos_taurus
ENSECAG00000009325	CSTF2	100	96.315	ENSCJAG00000004422	CSTF2	100	96.633	Callithrix_jacchus
ENSECAG00000009325	CSTF2	100	97.054	ENSCAFG00000017551	CSTF2	100	97.054	Canis_familiaris
ENSECAG00000009325	CSTF2	100	97.152	ENSCAFG00020007619	CSTF2	100	97.152	Canis_lupus_dingo
ENSECAG00000009325	CSTF2	100	96.187	ENSCHIG00000016994	CSTF2	100	96.187	Capra_hircus
ENSECAG00000009325	CSTF2	100	96.650	ENSTSYG00000006529	CSTF2	100	96.650	Carlito_syrichta
ENSECAG00000009325	CSTF2	100	94.640	ENSCPOG00000015255	CSTF2	100	94.640	Cavia_porcellus
ENSECAG00000009325	CSTF2	100	96.315	ENSCCAG00000032975	CSTF2	100	96.315	Cebus_capucinus
ENSECAG00000009325	CSTF2	100	96.482	ENSCATG00000022835	CSTF2	100	96.482	Cercocebus_atys
ENSECAG00000009325	CSTF2	100	94.640	ENSCLAG00000001904	CSTF2	100	94.640	Chinchilla_lanigera
ENSECAG00000009325	CSTF2	100	96.650	ENSCSAG00000010360	CSTF2	100	96.650	Chlorocebus_sabaeus
ENSECAG00000009325	CSTF2	68	100.000	ENSCHOG00000012803	CSTF2	75	100.000	Choloepus_hoffmanni
ENSECAG00000009325	CSTF2	100	77.294	ENSCPBG00000014293	CSTF2	100	76.888	Chrysemys_picta_bellii
ENSECAG00000009325	CSTF2	100	96.650	ENSCANG00000030612	CSTF2	100	96.650	Colobus_angolensis_palliatus
ENSECAG00000009325	CSTF2	100	92.069	ENSCGRG00001023023	Cstf2	100	91.034	Cricetulus_griseus_chok1gshd
ENSECAG00000009325	CSTF2	100	88.966	ENSCGRG00000003897	Cstf2	100	87.931	Cricetulus_griseus_crigri
ENSECAG00000009325	CSTF2	87	81.557	ENSCVAG00000005731	cstf2	97	58.746	Cyprinodon_variegatus
ENSECAG00000009325	CSTF2	72	98.182	ENSDARG00000090788	cstf2	93	93.750	Danio_rerio
ENSECAG00000009325	CSTF2	100	91.364	ENSDORG00000007195	Cstf2	100	91.364	Dipodomys_ordii
ENSECAG00000009325	CSTF2	73	93.243	ENSETEG00000004931	CSTF2	68	93.243	Echinops_telfairi
ENSECAG00000009325	CSTF2	100	100.000	ENSEASG00005001216	CSTF2	100	100.000	Equus_asinus_asinus
ENSECAG00000009325	CSTF2	100	97.655	ENSFCAG00000007000	CSTF2	100	97.655	Felis_catus
ENSECAG00000009325	CSTF2	92	78.014	ENSFALG00000003859	CSTF2	100	78.369	Ficedula_albicollis
ENSECAG00000009325	CSTF2	100	94.974	ENSFDAG00000002416	CSTF2	100	94.974	Fukomys_damarensis
ENSECAG00000009325	CSTF2	99	59.897	ENSFHEG00000017065	cstf2	94	58.911	Fundulus_heteroclitus
ENSECAG00000009325	CSTF2	99	58.810	ENSGMOG00000005145	cstf2	99	56.379	Gadus_morhua
ENSECAG00000009325	CSTF2	100	79.181	ENSGALG00000006760	CSTF2	100	84.000	Gallus_gallus
ENSECAG00000009325	CSTF2	99	56.110	ENSGACG00000017326	cstf2	93	81.633	Gasterosteus_aculeatus
ENSECAG00000009325	CSTF2	100	79.266	ENSGAGG00000006037	CSTF2	100	79.147	Gopherus_agassizii
ENSECAG00000009325	CSTF2	100	96.985	ENSGGOG00000022267	CSTF2	100	96.985	Gorilla_gorilla
ENSECAG00000009325	CSTF2	100	95.321	ENSHGLG00000000659	-	100	95.321	Heterocephalus_glaber_female
ENSECAG00000009325	CSTF2	100	80.589	ENSHGLG00000013455	-	100	80.589	Heterocephalus_glaber_female
ENSECAG00000009325	CSTF2	100	80.763	ENSHGLG00100015391	-	100	80.763	Heterocephalus_glaber_male
ENSECAG00000009325	CSTF2	100	95.321	ENSHGLG00100001130	-	100	95.321	Heterocephalus_glaber_male
ENSECAG00000009325	CSTF2	84	82.377	ENSHCOG00000005157	cstf2	98	59.524	Hippocampus_comes
ENSECAG00000009325	CSTF2	100	59.046	ENSIPUG00000017839	cstf2	99	60.891	Ictalurus_punctatus
ENSECAG00000009325	CSTF2	100	94.974	ENSSTOG00000023445	CSTF2	100	93.588	Ictidomys_tridecemlineatus
ENSECAG00000009325	CSTF2	100	93.414	ENSJJAG00000020507	Cstf2	100	93.414	Jaculus_jaculus
ENSECAG00000009325	CSTF2	84	80.658	ENSKMAG00000001068	cstf2	97	57.338	Kryptolebias_marmoratus
ENSECAG00000009325	CSTF2	54	94.915	ENSLBEG00000028720	cstf2	83	89.062	Labrus_bergylta
ENSECAG00000009325	CSTF2	99	68.689	ENSLACG00000015927	CSTF2	99	68.249	Latimeria_chalumnae
ENSECAG00000009325	CSTF2	99	65.464	ENSLOCG00000015300	cstf2	94	65.136	Lepisosteus_oculatus
ENSECAG00000009325	CSTF2	100	92.462	ENSLAFG00000000474	CSTF2	100	92.462	Loxodonta_africana
ENSECAG00000009325	CSTF2	100	96.650	ENSMFAG00000043888	CSTF2	100	96.650	Macaca_fascicularis
ENSECAG00000009325	CSTF2	100	95.812	ENSMMUG00000013008	CSTF2	100	95.812	Macaca_mulatta
ENSECAG00000009325	CSTF2	100	96.650	ENSMNEG00000041824	CSTF2	100	96.650	Macaca_nemestrina
ENSECAG00000009325	CSTF2	100	96.650	ENSMLEG00000036870	CSTF2	100	96.650	Mandrillus_leucophaeus
ENSECAG00000009325	CSTF2	82	79.399	ENSMAMG00000020364	cstf2	96	57.949	Mastacembelus_armatus
ENSECAG00000009325	CSTF2	93	69.799	ENSMGAG00000004139	CSTF2	100	83.665	Meleagris_gallopavo
ENSECAG00000009325	CSTF2	100	92.241	ENSMAUG00000000965	Cstf2	100	92.241	Mesocricetus_auratus
ENSECAG00000009325	CSTF2	100	95.477	ENSMICG00000014121	CSTF2	100	95.477	Microcebus_murinus
ENSECAG00000009325	CSTF2	100	90.862	ENSMOCG00000008081	Cstf2	100	90.862	Microtus_ochrogaster
ENSECAG00000009325	CSTF2	84	92.308	ENSMMOG00000000538	cstf2	97	53.642	Mola_mola
ENSECAG00000009325	CSTF2	100	80.395	ENSMODG00000011785	CSTF2	100	82.508	Monodelphis_domestica
ENSECAG00000009325	CSTF2	100	92.069	MGP_CAROLIEiJ_G0033383	Cstf2	100	92.069	Mus_caroli
ENSECAG00000009325	CSTF2	100	92.069	ENSMUSG00000031256	Cstf2	100	92.069	Mus_musculus
ENSECAG00000009325	CSTF2	100	92.055	MGP_PahariEiJ_G0031923	Cstf2	100	92.228	Mus_pahari
ENSECAG00000009325	CSTF2	100	92.069	MGP_SPRETEiJ_G0034548	Cstf2	100	92.069	Mus_spretus
ENSECAG00000009325	CSTF2	100	91.746	ENSMPUG00000002339	CSTF2	100	91.746	Mustela_putorius_furo
ENSECAG00000009325	CSTF2	100	90.620	ENSMLUG00000004598	CSTF2	98	90.620	Myotis_lucifugus
ENSECAG00000009325	CSTF2	100	93.264	ENSNGAG00000021985	Cstf2	100	93.437	Nannospalax_galili
ENSECAG00000009325	CSTF2	92	63.547	ENSNBRG00000021694	cstf2	100	54.594	Neolamprologus_brichardi
ENSECAG00000009325	CSTF2	100	96.650	ENSNLEG00000007510	CSTF2	100	96.650	Nomascus_leucogenys
ENSECAG00000009325	CSTF2	91	79.848	ENSMEUG00000014025	-	100	81.559	Notamacropus_eugenii
ENSECAG00000009325	CSTF2	100	78.163	ENSMEUG00000007875	-	100	79.549	Notamacropus_eugenii
ENSECAG00000009325	CSTF2	100	82.149	ENSMEUG00000011186	-	100	84.229	Notamacropus_eugenii
ENSECAG00000009325	CSTF2	87	81.071	ENSOPRG00000003106	CSTF2	87	81.071	Ochotona_princeps
ENSECAG00000009325	CSTF2	100	93.761	ENSODEG00000002059	CSTF2	100	93.761	Octodon_degus
ENSECAG00000009325	CSTF2	99	55.625	ENSONIG00000002631	cstf2	99	57.496	Oreochromis_niloticus
ENSECAG00000009325	CSTF2	94	98.214	ENSOANG00000004208	CSTF2	76	81.520	Ornithorhynchus_anatinus
ENSECAG00000009325	CSTF2	100	93.588	ENSOCUG00000010468	CSTF2	100	93.588	Oryctolagus_cuniculus
ENSECAG00000009325	CSTF2	86	80.000	ENSORLG00000001380	cstf2	97	57.436	Oryzias_latipes
ENSECAG00000009325	CSTF2	86	80.408	ENSORLG00020021917	cstf2	97	57.778	Oryzias_latipes_hni
ENSECAG00000009325	CSTF2	86	80.000	ENSORLG00015011996	cstf2	97	57.436	Oryzias_latipes_hsok
ENSECAG00000009325	CSTF2	83	80.992	ENSOMEG00000015507	cstf2	97	58.632	Oryzias_melastigma
ENSECAG00000009325	CSTF2	100	90.302	ENSOGAG00000011192	CSTF2	100	89.189	Otolemur_garnettii
ENSECAG00000009325	CSTF2	100	96.187	ENSOARG00000001022	CSTF2	100	96.187	Ovis_aries
ENSECAG00000009325	CSTF2	100	96.985	ENSPPAG00000031804	CSTF2	100	96.985	Pan_paniscus
ENSECAG00000009325	CSTF2	100	97.822	ENSPPRG00000022492	CSTF2	100	97.822	Panthera_pardus
ENSECAG00000009325	CSTF2	100	97.487	ENSPTIG00000009922	CSTF2	100	97.487	Panthera_tigris_altaica
ENSECAG00000009325	CSTF2	100	96.985	ENSPTRG00000022090	CSTF2	100	96.985	Pan_troglodytes
ENSECAG00000009325	CSTF2	100	96.650	ENSPANG00000002303	CSTF2	100	96.650	Papio_anubis
ENSECAG00000009325	CSTF2	99	62.353	ENSPKIG00000005033	cstf2	97	60.449	Paramormyrops_kingsleyae
ENSECAG00000009325	CSTF2	84	82.158	ENSPMGG00000006534	cstf2	97	58.081	Periophthalmus_magnuspinnatus
ENSECAG00000009325	CSTF2	100	91.379	ENSPEMG00000019415	Cstf2	100	91.379	Peromyscus_maniculatus_bairdii
ENSECAG00000009325	CSTF2	100	81.445	ENSPCIG00000002989	CSTF2	100	82.759	Phascolarctos_cinereus
ENSECAG00000009325	CSTF2	85	80.000	ENSPLAG00000011176	cstf2	97	56.033	Poecilia_latipinna
ENSECAG00000009325	CSTF2	85	80.000	ENSPMEG00000017743	cstf2	97	55.592	Poecilia_mexicana
ENSECAG00000009325	CSTF2	58	71.726	ENSPREG00000011481	cstf2	97	58.292	Poecilia_reticulata
ENSECAG00000009325	CSTF2	100	96.817	ENSPPYG00000020541	CSTF2	100	96.817	Pongo_abelii
ENSECAG00000009325	CSTF2	100	96.147	ENSPCOG00000027744	CSTF2	100	96.147	Propithecus_coquereli
ENSECAG00000009325	CSTF2	97	81.867	ENSPVAG00000008342	CSTF2	100	81.867	Pteropus_vampyrus
ENSECAG00000009325	CSTF2	99	60.570	ENSPNAG00000018887	cstf2	99	61.130	Pygocentrus_nattereri
ENSECAG00000009325	CSTF2	100	91.552	ENSRNOG00000048025	Cstf2	100	91.552	Rattus_norvegicus
ENSECAG00000009325	CSTF2	100	94.974	ENSRBIG00000030745	CSTF2	100	94.974	Rhinopithecus_bieti
ENSECAG00000009325	CSTF2	100	96.650	ENSRROG00000045042	CSTF2	100	96.650	Rhinopithecus_roxellana
ENSECAG00000009325	CSTF2	100	96.315	ENSSBOG00000021649	CSTF2	100	96.315	Saimiri_boliviensis_boliviensis
ENSECAG00000009325	CSTF2	95	100.000	ENSSHAG00000003681	CSTF2	92	83.477	Sarcophilus_harrisii
ENSECAG00000009325	CSTF2	99	63.894	ENSSFOG00015006348	cstf2	98	63.591	Scleropages_formosus
ENSECAG00000009325	CSTF2	99	56.830	ENSSMAG00000013463	cstf2	97	58.644	Scophthalmus_maximus
ENSECAG00000009325	CSTF2	100	64.732	ENSSPUG00000005288	-	99	80.297	Sphenodon_punctatus
ENSECAG00000009325	CSTF2	100	96.817	ENSSSCG00000012486	CSTF2	100	96.970	Sus_scrofa
ENSECAG00000009325	CSTF2	100	79.422	ENSTGUG00000002253	CSTF2	100	79.762	Taeniopygia_guttata
ENSECAG00000009325	CSTF2	99	59.762	ENSTNIG00000016860	cstf2	99	58.717	Tetraodon_nigroviridis
ENSECAG00000009325	CSTF2	55	100.000	ENSTBEG00000010029	-	69	100.000	Tupaia_belangeri
ENSECAG00000009325	CSTF2	100	97.747	ENSTTRG00000013556	CSTF2	100	97.747	Tursiops_truncatus
ENSECAG00000009325	CSTF2	100	97.010	ENSUAMG00000026605	CSTF2	100	97.010	Ursus_americanus
ENSECAG00000009325	CSTF2	100	90.285	ENSUMAG00000012417	CSTF2	100	97.872	Ursus_maritimus
ENSECAG00000009325	CSTF2	73	96.501	ENSVPAG00000006466	CSTF2	72	96.501	Vicugna_pacos
ENSECAG00000009325	CSTF2	100	97.227	ENSVVUG00000004717	CSTF2	100	97.227	Vulpes_vulpes
ENSECAG00000009325	CSTF2	100	62.479	ENSXETG00000009642	cstf2	100	65.470	Xenopus_tropicalis
ENSECAG00000009325	CSTF2	86	76.400	ENSXCOG00000016436	cstf2	86	91.549	Xiphophorus_couchianus