EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSECAG00000009396 (Gene tree)
Gene ID
100054235
Gene Symbol
PABPC4
Alias
-
Full Name
poly(A) binding protein cytoplasmic 4
Gene Type
protein_coding
Species
Equus_caballus
Status
putative
Strand
Plus strand
Length
14738 bases
Position
chr2:18481409-18496146
Accession
50737
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSECAP00000007727PABPPF00658.182.8e-3111
ENSECAP00000041891PABPPF00658.182.9e-3111
ENSECAP00000026317PABPPF00658.183.3e-3111
ENSECAP00000007727RRM_5PF13893.65.2e-0912
ENSECAP00000007727RRM_5PF13893.65.2e-0922
ENSECAP00000041891RRM_5PF13893.61e-0712
ENSECAP00000041891RRM_5PF13893.61e-0722
ENSECAP00000026317RRM_5PF13893.61.3e-0712
ENSECAP00000026317RRM_5PF13893.61.3e-0722
ENSECAP00000007727RRM_1PF00076.225.9e-9214
ENSECAP00000007727RRM_1PF00076.225.9e-9224
ENSECAP00000007727RRM_1PF00076.225.9e-9234
ENSECAP00000007727RRM_1PF00076.225.9e-9244
ENSECAP00000041891RRM_1PF00076.225.5e-8714
ENSECAP00000041891RRM_1PF00076.225.5e-8724
ENSECAP00000041891RRM_1PF00076.225.5e-8734
ENSECAP00000041891RRM_1PF00076.225.5e-8744
ENSECAP00000026317RRM_1PF00076.227.2e-8714
ENSECAP00000026317RRM_1PF00076.227.2e-8724
ENSECAP00000026317RRM_1PF00076.227.2e-8734
ENSECAP00000026317RRM_1PF00076.227.2e-8744
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSECAT00000053270-2379-ENSECAP00000041891679 (aa)--
ENSECAT00000010057-2463XM_003364403ENSECAP00000007727660 (aa)XP_003364451F6Z154
ENSECAT00000034945-2466-ENSECAP00000026317708 (aa)--
Gene Model
Click here to download ENSECAG00000009396's gene model file
Pathways
Pathway IDPathway NameSource
ecb03013RNA transportKEGG
ecb03015mRNA surveillance pathwayKEGG
ecb03018RNA degradationKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSECAG00000009396's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSECAG00000009396PABPC45736.111ENSECAG00000020594ELAVL39233.735
ENSECAG00000009396PABPC45537.500ENSECAG00000006649CELF26537.500
ENSECAG00000009396PABPC45631.579ENSECAG00000020142ELAVL28334.940
ENSECAG00000009396PABPC45231.646ENSECAG00000032164HNRNPA05032.450
ENSECAG00000009396PABPC45531.579ENSECAG00000009970TIAL19831.126
ENSECAG00000009396PABPC45873.784ENSECAG00000031416PABPC4L9973.784
ENSECAG00000009396PABPC45667.978ENSECAG00000003452PABPC59567.769
ENSECAG00000009396PABPC46130.000ENSECAG00000019459ELAVL19530.000
ENSECAG00000009396PABPC49742.969ENSECAG00000038200-9240.758
ENSECAG00000009396PABPC45676.382ENSECAG00000002620-9576.382
ENSECAG00000009396PABPC45730.625ENSECAG00000022284ELAVL49030.625
ENSECAG00000009396PABPC46668.610ENSECAG00000040139-7868.610
ENSECAG00000009396PABPC49975.075ENSECAG00000020699PABPC19974.925
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSECAG00000009396PABPC410099.545ENSG00000090621PABPC4100100.000Homo_sapiens
ENSECAG00000009396PABPC49979.394ENSAPOG00000001161pabpc410079.821Acanthochromis_polyacanthus
ENSECAG00000009396PABPC49854.992ENSAMEG00000015083-9954.685Ailuropoda_melanoleuca
ENSECAG00000009396PABPC410099.394ENSAMEG00000011535-10099.394Ailuropoda_melanoleuca
ENSECAG00000009396PABPC410080.120ENSACIG00000023343pabpc410080.717Amphilophus_citrinellus
ENSECAG00000009396PABPC49979.848ENSAOCG00000021529pabpc410090.807Amphiprion_ocellaris
ENSECAG00000009396PABPC49979.848ENSAPEG00000019196pabpc410080.120Amphiprion_percula
ENSECAG00000009396PABPC49978.550ENSATEG00000007402pabpc410079.254Anabas_testudineus
ENSECAG00000009396PABPC49987.557ENSAPLG00000009729-10087.557Anas_platyrhynchos
ENSECAG00000009396PABPC49985.714ENSACAG00000002544PABPC410090.161Anolis_carolinensis
ENSECAG00000009396PABPC410099.394ENSANAG00000025079PABPC410099.394Aotus_nancymaae
ENSECAG00000009396PABPC410079.522ENSACLG00000019558pabpc410080.120Astatotilapia_calliptera
ENSECAG00000009396PABPC49975.909ENSAMXG00000018779pabpc49976.515Astyanax_mexicanus
ENSECAG00000009396PABPC410096.823ENSBTAG00000017125PABPC410096.823Bos_taurus
ENSECAG00000009396PABPC45586.826ENSBTAG00000048536-9886.826Bos_taurus
ENSECAG00000009396PABPC47883.516ENSCJAG00000045953-9289.712Callithrix_jacchus
ENSECAG00000009396PABPC410099.242ENSCJAG00000002512-10099.242Callithrix_jacchus
ENSECAG00000009396PABPC49999.497ENSCAFG00000003081PABPC410095.303Canis_familiaris
ENSECAG00000009396PABPC410099.545ENSCAFG00020004161PABPC410099.545Canis_lupus_dingo
ENSECAG00000009396PABPC410076.667ENSCHIG00000023385-10076.667Capra_hircus
ENSECAG00000009396PABPC410099.394ENSCHIG00000019398-10099.394Capra_hircus
ENSECAG00000009396PABPC410099.545ENSTSYG00000006532PABPC410099.545Carlito_syrichta
ENSECAG00000009396PABPC49999.240ENSCAPG00000015984PABPC410099.240Cavia_aperea
ENSECAG00000009396PABPC410099.242ENSCPOG00000009552PABPC410099.242Cavia_porcellus
ENSECAG00000009396PABPC410099.394ENSCCAG00000037306PABPC410099.394Cebus_capucinus
ENSECAG00000009396PABPC410099.697ENSCATG00000042164PABPC410099.697Cercocebus_atys
ENSECAG00000009396PABPC410099.242ENSCLAG00000011899PABPC410099.242Chinchilla_lanigera
ENSECAG00000009396PABPC410099.697ENSCSAG00000001135PABPC410099.697Chlorocebus_sabaeus
ENSECAG00000009396PABPC48697.889ENSCHOG00000005327PABPC48197.889Choloepus_hoffmanni
ENSECAG00000009396PABPC49987.860ENSCPBG00000001038PABPC410087.860Chrysemys_picta_bellii
ENSECAG00000009396PABPC49999.539ENSCANG00000034177PABPC410099.539Colobus_angolensis_palliatus
ENSECAG00000009396PABPC410097.289ENSCGRG00001018166Pabpc410097.289Cricetulus_griseus_chok1gshd
ENSECAG00000009396PABPC49994.962ENSCGRG00000009777Pabpc410094.962Cricetulus_griseus_crigri
ENSECAG00000009396PABPC410079.073ENSCSEG00000000130pabpc410079.522Cynoglossus_semilaevis
ENSECAG00000009396PABPC49979.939ENSCVAG00000019246pabpc410080.851Cyprinodon_variegatus
ENSECAG00000009396PABPC49981.639ENSDARG00000059259pabpc410081.476Danio_rerio
ENSECAG00000009396PABPC498100.000ENSDNOG00000018444-100100.000Dasypus_novemcinctus
ENSECAG00000009396PABPC410097.121ENSDORG00000011581Pabpc410097.121Dipodomys_ordii
ENSECAG00000009396PABPC4100100.000ENSETEG00000018453-84100.000Echinops_telfairi
ENSECAG00000009396PABPC48662.390ENSETEG00000009172-9965.385Echinops_telfairi
ENSECAG00000009396PABPC49773.457ENSEBUG00000013782pabpc49972.741Eptatretus_burgeri
ENSECAG00000009396PABPC49973.374ENSEBUG00000000992pabpc49980.346Eptatretus_burgeri
ENSECAG00000009396PABPC4100100.000ENSEASG00005014119PABPC4100100.000Equus_asinus_asinus
ENSECAG00000009396PABPC410096.364ENSEEUG00000002962PABPC410096.364Erinaceus_europaeus
ENSECAG00000009396PABPC49980.365ENSELUG00000003195pabpc49881.089Esox_lucius
ENSECAG00000009396PABPC410099.697ENSFCAG00000015254-10099.697Felis_catus
ENSECAG00000009396PABPC49987.102ENSFALG00000000543PABPC410087.102Ficedula_albicollis
ENSECAG00000009396PABPC49067.490ENSFDAG00000010581-10063.361Fukomys_damarensis
ENSECAG00000009396PABPC410099.545ENSFDAG00000020016-10099.545Fukomys_damarensis
ENSECAG00000009396PABPC410079.790ENSFHEG00000007548pabpc49688.578Fundulus_heteroclitus
ENSECAG00000009396PABPC49979.217ENSGMOG00000019025pabpc49979.940Gadus_morhua
ENSECAG00000009396PABPC49987.860ENSGALG00000003800PABPC410087.860Gallus_gallus
ENSECAG00000009396PABPC410079.880ENSGAFG00000018195pabpc49895.556Gambusia_affinis
ENSECAG00000009396PABPC410078.027ENSGACG00000007179pabpc410078.774Gasterosteus_aculeatus
ENSECAG00000009396PABPC49987.709ENSGAGG00000001888PABPC410087.709Gopherus_agassizii
ENSECAG00000009396PABPC410099.545ENSGGOG00000004002PABPC410099.545Gorilla_gorilla
ENSECAG00000009396PABPC410079.671ENSHBUG00000020206pabpc410080.269Haplochromis_burtoni
ENSECAG00000009396PABPC410099.697ENSHGLG00000011162PABPC410099.697Heterocephalus_glaber_female
ENSECAG00000009396PABPC410097.424ENSHGLG00100001580PABPC410097.424Heterocephalus_glaber_male
ENSECAG00000009396PABPC410079.192ENSHCOG00000012694pabpc410079.341Hippocampus_comes
ENSECAG00000009396PABPC49879.908ENSIPUG00000016620pabpc49980.480Ictalurus_punctatus
ENSECAG00000009396PABPC410097.273ENSSTOG00000010416PABPC410097.273Ictidomys_tridecemlineatus
ENSECAG00000009396PABPC410095.000ENSJJAG00000007781Pabpc410095.000Jaculus_jaculus
ENSECAG00000009396PABPC49979.398ENSKMAG00000013597pabpc49979.669Kryptolebias_marmoratus
ENSECAG00000009396PABPC410079.018ENSLBEG00000013654pabpc410079.285Labrus_bergylta
ENSECAG00000009396PABPC49984.465ENSLACG00000011907PABPC410084.465Latimeria_chalumnae
ENSECAG00000009396PABPC49982.229ENSLOCG00000001877pabpc49982.078Lepisosteus_oculatus
ENSECAG00000009396PABPC410099.545ENSLAFG00000000151PABPC410099.545Loxodonta_africana
ENSECAG00000009396PABPC410099.697ENSMFAG00000041481PABPC410099.697Macaca_fascicularis
ENSECAG00000009396PABPC410099.697ENSMMUG00000007497PABPC410099.697Macaca_mulatta
ENSECAG00000009396PABPC410099.545ENSMNEG00000043054PABPC410099.545Macaca_nemestrina
ENSECAG00000009396PABPC410099.697ENSMLEG00000040716PABPC410099.697Mandrillus_leucophaeus
ENSECAG00000009396PABPC49979.545ENSMAMG00000010025pabpc49979.398Mastacembelus_armatus
ENSECAG00000009396PABPC410079.372ENSMZEG00005006141pabpc49290.807Maylandia_zebra
ENSECAG00000009396PABPC49987.248ENSMGAG00000005408PABPC410088.075Meleagris_gallopavo
ENSECAG00000009396PABPC47996.465ENSMAUG00000019763-8396.465Mesocricetus_auratus
ENSECAG00000009396PABPC45581.287ENSMAUG00000004089-9281.287Mesocricetus_auratus
ENSECAG00000009396PABPC46989.423ENSMAUG00000001295-9789.423Mesocricetus_auratus
ENSECAG00000009396PABPC49973.649ENSMICG00000036729-10085.435Microcebus_murinus
ENSECAG00000009396PABPC48995.601ENSMICG00000016633-9799.149Microcebus_murinus
ENSECAG00000009396PABPC410097.741ENSMOCG00000006763Pabpc410097.741Microtus_ochrogaster
ENSECAG00000009396PABPC410074.854ENSMMOG00000002363pabpc49977.376Mola_mola
ENSECAG00000009396PABPC45182.692ENSMODG00000019847-6882.692Monodelphis_domestica
ENSECAG00000009396PABPC49889.352ENSMODG00000017657-10088.939Monodelphis_domestica
ENSECAG00000009396PABPC45674.011ENSMODG00000018051-9174.011Monodelphis_domestica
ENSECAG00000009396PABPC49979.154ENSMALG00000011017pabpc410079.285Monopterus_albus
ENSECAG00000009396PABPC49984.068MGP_CAROLIEiJ_G0024864-10084.068Mus_caroli
ENSECAG00000009396PABPC410097.727MGP_CAROLIEiJ_G0026435-10099.291Mus_caroli
ENSECAG00000009396PABPC410098.182ENSMUSG00000011257Pabpc410099.405Mus_musculus
ENSECAG00000009396PABPC49997.849MGP_PahariEiJ_G0028765Pabpc4100100.000Mus_pahari
ENSECAG00000009396PABPC49978.900MGP_SPRETEiJ_G0027415Pabpc410099.291Mus_spretus
ENSECAG00000009396PABPC410099.697ENSMPUG00000014414-10099.697Mustela_putorius_furo
ENSECAG00000009396PABPC49551.027ENSMPUG00000006836-10050.869Mustela_putorius_furo
ENSECAG00000009396PABPC410092.576ENSMLUG00000012068PABPC410092.576Myotis_lucifugus
ENSECAG00000009396PABPC410096.818ENSNGAG00000018292Pabpc410096.818Nannospalax_galili
ENSECAG00000009396PABPC46486.441ENSNBRG00000010047-7586.441Neolamprologus_brichardi
ENSECAG00000009396PABPC45792.788ENSNBRG00000009708pabpc49892.788Neolamprologus_brichardi
ENSECAG00000009396PABPC410097.424ENSNLEG00000011928PABPC410097.424Nomascus_leucogenys
ENSECAG00000009396PABPC48695.238ENSOPRG00000011984PABPC48798.947Ochotona_princeps
ENSECAG00000009396PABPC49989.528ENSODEG00000017434-10089.409Octodon_degus
ENSECAG00000009396PABPC410098.636ENSODEG00000006592-10098.636Octodon_degus
ENSECAG00000009396PABPC45085.714ENSODEG00000013457-10085.714Octodon_degus
ENSECAG00000009396PABPC410079.671ENSONIG00000008176pabpc410079.970Oreochromis_niloticus
ENSECAG00000009396PABPC49987.405ENSOANG00000010001PABPC410087.405Ornithorhynchus_anatinus
ENSECAG00000009396PABPC49699.367ENSOCUG00000000562PABPC48899.367Oryctolagus_cuniculus
ENSECAG00000009396PABPC49991.049ENSORLG00000017479pabpc49991.049Oryzias_latipes
ENSECAG00000009396PABPC49991.049ENSORLG00020018644pabpc49991.049Oryzias_latipes_hni
ENSECAG00000009396PABPC49991.049ENSORLG00015015042pabpc49991.049Oryzias_latipes_hsok
ENSECAG00000009396PABPC49979.848ENSOMEG00000014410pabpc49983.468Oryzias_melastigma
ENSECAG00000009396PABPC410097.134ENSOGAG00000004067PABPC410097.134Otolemur_garnettii
ENSECAG00000009396PABPC410099.394ENSOARG00000020060PABPC410099.394Ovis_aries
ENSECAG00000009396PABPC410099.545ENSPPAG00000043625PABPC410099.545Pan_paniscus
ENSECAG00000009396PABPC410099.697ENSPPRG00000024727PABPC410099.697Panthera_pardus
ENSECAG00000009396PABPC410099.697ENSPTIG00000005829PABPC410099.697Panthera_tigris_altaica
ENSECAG00000009396PABPC410099.545ENSPTRG00000000573PABPC410099.545Pan_troglodytes
ENSECAG00000009396PABPC410099.545ENSPANG00000009484PABPC410099.545Papio_anubis
ENSECAG00000009396PABPC49981.241ENSPKIG00000025356pabpc49981.846Paramormyrops_kingsleyae
ENSECAG00000009396PABPC49987.860ENSPSIG00000016892PABPC410087.860Pelodiscus_sinensis
ENSECAG00000009396PABPC410075.988ENSPMGG00000009073pabpc49977.039Periophthalmus_magnuspinnatus
ENSECAG00000009396PABPC410091.212ENSPEMG00000024193-9991.212Peromyscus_maniculatus_bairdii
ENSECAG00000009396PABPC410097.273ENSPEMG00000023569-9997.273Peromyscus_maniculatus_bairdii
ENSECAG00000009396PABPC49771.311ENSPMAG00000007885pabpc410069.822Petromyzon_marinus
ENSECAG00000009396PABPC48970.132ENSPMAG00000002836pabpc410070.462Petromyzon_marinus
ENSECAG00000009396PABPC49888.717ENSPCIG00000020674PABPC410093.810Phascolarctos_cinereus
ENSECAG00000009396PABPC410079.192ENSPFOG00000002682pabpc410079.940Poecilia_formosa
ENSECAG00000009396PABPC410079.042ENSPLAG00000010112pabpc410080.389Poecilia_latipinna
ENSECAG00000009396PABPC49979.635ENSPMEG00000019739pabpc410080.090Poecilia_mexicana
ENSECAG00000009396PABPC410083.447ENSPREG00000001589pabpc410083.447Poecilia_reticulata
ENSECAG00000009396PABPC410099.545ENSPPYG00000001506PABPC410099.545Pongo_abelii
ENSECAG00000009396PABPC410094.697ENSPCAG00000003341PABPC410094.697Procavia_capensis
ENSECAG00000009396PABPC410099.697ENSPCOG00000023725-10099.697Propithecus_coquereli
ENSECAG00000009396PABPC49982.173ENSPCOG00000025882-9594.059Propithecus_coquereli
ENSECAG00000009396PABPC49999.160ENSPVAG00000002187PABPC410099.160Pteropus_vampyrus
ENSECAG00000009396PABPC410079.522ENSPNYG00000006134pabpc410080.120Pundamilia_nyererei
ENSECAG00000009396PABPC410079.940ENSPNAG00000024355pabpc410080.090Pygocentrus_nattereri
ENSECAG00000009396PABPC410095.758ENSRNOG00000015642Pabpc410095.758Rattus_norvegicus
ENSECAG00000009396PABPC410093.636ENSRNOG00000028592AABR07035074.110093.636Rattus_norvegicus
ENSECAG00000009396PABPC410099.697ENSRBIG00000039761PABPC410099.697Rhinopithecus_bieti
ENSECAG00000009396PABPC410099.697ENSRROG00000033355PABPC410099.697Rhinopithecus_roxellana
ENSECAG00000009396PABPC410099.242ENSSBOG00000026193PABPC410099.242Saimiri_boliviensis_boliviensis
ENSECAG00000009396PABPC49888.563ENSSHAG00000018139PABPC410088.164Sarcophilus_harrisii
ENSECAG00000009396PABPC49982.132ENSSFOG00015023514pabpc49982.031Scleropages_formosus
ENSECAG00000009396PABPC49979.123ENSSMAG00000009007pabpc49979.274Scophthalmus_maximus
ENSECAG00000009396PABPC49979.242ENSSDUG00000012683pabpc49588.046Seriola_dumerili
ENSECAG00000009396PABPC49979.242ENSSLDG00000013025pabpc49785.588Seriola_lalandi_dorsalis
ENSECAG00000009396PABPC410092.273ENSSARG00000000310PABPC49498.487Sorex_araneus
ENSECAG00000009396PABPC49987.405ENSSPUG00000003204PABPC410087.253Sphenodon_punctatus
ENSECAG00000009396PABPC49990.562ENSSPAG00000009252pabpc49979.136Stegastes_partitus
ENSECAG00000009396PABPC48950.505ENSSSCG00000036170-9650.505Sus_scrofa
ENSECAG00000009396PABPC410099.545ENSSSCG00000003660-10099.545Sus_scrofa
ENSECAG00000009396PABPC49987.746ENSTGUG00000001266PABPC410087.746Taeniopygia_guttata
ENSECAG00000009396PABPC410078.743ENSTRUG00000005907pabpc49979.279Takifugu_rubripes
ENSECAG00000009396PABPC410075.716ENSTNIG00000016902pabpc49975.716Tetraodon_nigroviridis
ENSECAG00000009396PABPC49988.571ENSTBEG00000009035PABPC410088.571Tupaia_belangeri
ENSECAG00000009396PABPC49983.716ENSTTRG00000014340PABPC410087.395Tursiops_truncatus
ENSECAG00000009396PABPC410099.394ENSUAMG00000000303PABPC410099.394Ursus_americanus
ENSECAG00000009396PABPC410099.394ENSUMAG00000019585PABPC410099.464Ursus_maritimus
ENSECAG00000009396PABPC48498.582ENSVPAG00000010041PABPC47798.582Vicugna_pacos
ENSECAG00000009396PABPC410099.545ENSVVUG00000005215PABPC410099.545Vulpes_vulpes
ENSECAG00000009396PABPC45897.024ENSXETG00000027221-10097.024Xenopus_tropicalis
ENSECAG00000009396PABPC49979.514ENSXETG00000010946pabpc410079.514Xenopus_tropicalis
ENSECAG00000009396PABPC49978.073ENSXCOG00000013190pabpc49690.094Xiphophorus_couchianus
ENSECAG00000009396PABPC410079.341ENSXMAG00000019007pabpc410080.240Xiphophorus_maculatus

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