EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSECAG00000009759 (Gene tree)
Gene ID: 100070414
Gene Symbol: TNRC6B
Alias: -
Full Name: trinucleotide repeat containing 6B
Gene Type: protein_coding
Species: Equus_caballus
Status: putative
Strand: Plus strand
Length: 177429 bases
Position: chr28:37935312-38112740
Accession: 24399
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSECAP00000031208	Ago_hook	PF10427.9	1.4e-19	1	1
ENSECAP00000026044	Ago_hook	PF10427.9	1.6e-19	1	1
ENSECAP00000032777	Ago_hook	PF10427.9	1.7e-19	1	1
ENSECAP00000008008	Ago_hook	PF10427.9	2.1e-19	1	1
ENSECAP00000038718	Ago_hook	PF10427.9	2.1e-19	1	1
ENSECAP00000034207	Ago_hook	PF10427.9	2.2e-19	1	1
ENSECAP00000026272	Ago_hook	PF10427.9	2.9e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSECAT00000044308	-	5202	-	ENSECAP00000026272	1733 (aa)	-	-
ENSECAT00000057151	-	5208	-	ENSECAP00000026044	1735 (aa)	-	-
ENSECAT00000038135	-	5142	-	ENSECAP00000031208	1713 (aa)	-	-
ENSECAT00000010386	-	5568	XM_023631470	ENSECAP00000008008	1815 (aa)	XP_023487238	F6RUY8
ENSECAT00000032907	-	5202	-	ENSECAP00000038718	1692 (aa)	-	-
ENSECAT00000042271	-	5739	-	ENSECAP00000032777	1872 (aa)	-	-
ENSECAT00000060311	-	5463	-	ENSECAP00000034207	1779 (aa)	XP_014592338	UPI000C9E07CA

Gene Model

Click here to download ENSECAG00000009759's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSECAG00000009759's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSECAG00000009759	TNRC6B	99	54.404	ENSECAG00000025056	TNRC6A	95	52.083
ENSECAG00000009759	TNRC6B	98	49.885	ENSECAG00000012486	TNRC6C	95	49.403

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSECAG00000009759	TNRC6B	100	99.500	ENSG00000100354	TNRC6B	100	100.000	Homo_sapiens
ENSECAG00000009759	TNRC6B	100	98.500	ENSAMEG00000011025	TNRC6B	100	98.757	Ailuropoda_melanoleuca
ENSECAG00000009759	TNRC6B	99	93.532	ENSAPLG00000009347	TNRC6B	96	94.030	Anas_platyrhynchos
ENSECAG00000009759	TNRC6B	99	93.500	ENSACAG00000007281	TNRC6B	95	93.500	Anolis_carolinensis
ENSECAG00000009759	TNRC6B	100	99.500	ENSANAG00000035042	TNRC6B	100	97.644	Aotus_nancymaae
ENSECAG00000009759	TNRC6B	85	46.272	ENSAMXG00000008707	tnrc6b	79	81.250	Astyanax_mexicanus
ENSECAG00000009759	TNRC6B	100	99.500	ENSBTAG00000021076	TNRC6B	100	97.277	Bos_taurus
ENSECAG00000009759	TNRC6B	100	99.500	ENSCJAG00000002732	TNRC6B	100	99.718	Callithrix_jacchus
ENSECAG00000009759	TNRC6B	100	99.500	ENSCAFG00000001255	TNRC6B	99	98.749	Canis_familiaris
ENSECAG00000009759	TNRC6B	100	99.500	ENSCAFG00020002189	TNRC6B	99	98.224	Canis_lupus_dingo
ENSECAG00000009759	TNRC6B	100	100.000	ENSCHIG00000003491	TNRC6B	100	97.436	Capra_hircus
ENSECAG00000009759	TNRC6B	100	99.000	ENSTSYG00000011836	TNRC6B	100	96.938	Carlito_syrichta
ENSECAG00000009759	TNRC6B	100	99.500	ENSCPOG00000005705	TNRC6B	100	96.701	Cavia_porcellus
ENSECAG00000009759	TNRC6B	98	96.403	ENSCCAG00000019912	TNRC6B	99	96.403	Cebus_capucinus
ENSECAG00000009759	TNRC6B	98	99.000	ENSCATG00000029291	TNRC6B	100	96.353	Cercocebus_atys
ENSECAG00000009759	TNRC6B	100	99.500	ENSCLAG00000016942	TNRC6B	100	96.863	Chinchilla_lanigera
ENSECAG00000009759	TNRC6B	98	99.500	ENSCSAG00000006021	TNRC6B	93	99.500	Chlorocebus_sabaeus
ENSECAG00000009759	TNRC6B	92	98.592	ENSCPBG00000022932	TNRC6B	93	98.592	Chrysemys_picta_bellii
ENSECAG00000009759	TNRC6B	100	99.500	ENSCANG00000030776	TNRC6B	100	97.059	Colobus_angolensis_palliatus
ENSECAG00000009759	TNRC6B	98	95.376	ENSCGRG00001020166	Tnrc6b	99	95.371	Cricetulus_griseus_chok1gshd
ENSECAG00000009759	TNRC6B	100	95.487	ENSCGRG00000016696	Tnrc6b	99	95.424	Cricetulus_griseus_crigri
ENSECAG00000009759	TNRC6B	100	98.500	ENSDNOG00000012744	TNRC6B	100	96.880	Dasypus_novemcinctus
ENSECAG00000009759	TNRC6B	100	98.500	ENSDORG00000003386	Tnrc6b	100	96.860	Dipodomys_ordii
ENSECAG00000009759	TNRC6B	99	86.653	ENSETEG00000006570	TNRC6B	99	85.932	Echinops_telfairi
ENSECAG00000009759	TNRC6B	100	100.000	ENSEASG00005005306	TNRC6B	100	98.843	Equus_asinus_asinus
ENSECAG00000009759	TNRC6B	61	97.802	ENSEEUG00000008690	-	62	97.802	Erinaceus_europaeus
ENSECAG00000009759	TNRC6B	100	100.000	ENSFCAG00000004791	TNRC6B	100	98.721	Felis_catus
ENSECAG00000009759	TNRC6B	96	94.527	ENSFALG00000012195	TNRC6B	96	95.025	Ficedula_albicollis
ENSECAG00000009759	TNRC6B	100	99.000	ENSFDAG00000021368	TNRC6B	100	97.302	Fukomys_damarensis
ENSECAG00000009759	TNRC6B	99	94.000	ENSGALG00000012050	TNRC6B	93	94.000	Gallus_gallus
ENSECAG00000009759	TNRC6B	99	94.000	ENSGAGG00000025188	TNRC6B	94	94.000	Gopherus_agassizii
ENSECAG00000009759	TNRC6B	100	99.500	ENSGGOG00000008444	TNRC6B	100	97.762	Gorilla_gorilla
ENSECAG00000009759	TNRC6B	100	99.500	ENSHGLG00000009306	TNRC6B	100	96.813	Heterocephalus_glaber_female
ENSECAG00000009759	TNRC6B	100	99.500	ENSHGLG00100018108	TNRC6B	100	96.860	Heterocephalus_glaber_male
ENSECAG00000009759	TNRC6B	81	44.231	ENSIPUG00000001515	tnrc6b	95	49.727	Ictalurus_punctatus
ENSECAG00000009759	TNRC6B	100	99.000	ENSSTOG00000008927	TNRC6B	100	97.355	Ictidomys_tridecemlineatus
ENSECAG00000009759	TNRC6B	99	97.000	ENSJJAG00000015779	Tnrc6b	100	95.923	Jaculus_jaculus
ENSECAG00000009759	TNRC6B	99	61.824	ENSLACG00000000628	-	99	62.075	Latimeria_chalumnae
ENSECAG00000009759	TNRC6B	78	96.667	ENSLAFG00000014473	TNRC6B	100	96.938	Loxodonta_africana
ENSECAG00000009759	TNRC6B	98	99.500	ENSMFAG00000003862	TNRC6B	100	96.471	Macaca_fascicularis
ENSECAG00000009759	TNRC6B	100	99.500	ENSMMUG00000021345	TNRC6B	100	97.529	Macaca_mulatta
ENSECAG00000009759	TNRC6B	100	99.500	ENSMNEG00000042745	TNRC6B	100	97.172	Macaca_nemestrina
ENSECAG00000009759	TNRC6B	100	99.500	ENSMLEG00000041780	TNRC6B	100	97.529	Mandrillus_leucophaeus
ENSECAG00000009759	TNRC6B	99	93.500	ENSMGAG00000012333	TNRC6B	95	93.500	Meleagris_gallopavo
ENSECAG00000009759	TNRC6B	99	96.500	ENSMAUG00000016123	Tnrc6b	98	95.367	Mesocricetus_auratus
ENSECAG00000009759	TNRC6B	100	98.500	ENSMICG00000014056	TNRC6B	100	97.479	Microcebus_murinus
ENSECAG00000009759	TNRC6B	99	94.517	ENSMOCG00000020334	Tnrc6b	100	95.500	Microtus_ochrogaster
ENSECAG00000009759	TNRC6B	99	97.000	MGP_CAROLIEiJ_G0020043	Tnrc6b	100	95.267	Mus_caroli
ENSECAG00000009759	TNRC6B	99	97.000	ENSMUSG00000047888	Tnrc6b	100	95.212	Mus_musculus
ENSECAG00000009759	TNRC6B	99	97.000	MGP_PahariEiJ_G0020045	Tnrc6b	100	94.879	Mus_pahari
ENSECAG00000009759	TNRC6B	99	97.000	MGP_SPRETEiJ_G0020941	Tnrc6b	100	95.891	Mus_spretus
ENSECAG00000009759	TNRC6B	97	98.667	ENSMPUG00000016442	TNRC6B	100	95.106	Mustela_putorius_furo
ENSECAG00000009759	TNRC6B	100	99.500	ENSMLUG00000008765	TNRC6B	99	97.548	Myotis_lucifugus
ENSECAG00000009759	TNRC6B	99	97.015	ENSNGAG00000021294	Tnrc6b	100	95.547	Nannospalax_galili
ENSECAG00000009759	TNRC6B	88	99.500	ENSNLEG00000015311	TNRC6B	100	97.998	Nomascus_leucogenys
ENSECAG00000009759	TNRC6B	89	97.500	ENSOPRG00000012054	TNRC6B	83	97.500	Ochotona_princeps
ENSECAG00000009759	TNRC6B	100	99.500	ENSODEG00000013146	TNRC6B	100	97.305	Octodon_degus
ENSECAG00000009759	TNRC6B	93	45.867	ENSONIG00000019679	-	99	40.914	Oreochromis_niloticus
ENSECAG00000009759	TNRC6B	99	99.500	ENSOCUG00000016128	TNRC6B	100	96.143	Oryctolagus_cuniculus
ENSECAG00000009759	TNRC6B	100	99.500	ENSOGAG00000011096	TNRC6B	99	97.168	Otolemur_garnettii
ENSECAG00000009759	TNRC6B	100	100.000	ENSOARG00000017238	TNRC6B	100	97.039	Ovis_aries
ENSECAG00000009759	TNRC6B	100	99.500	ENSPPAG00000028514	TNRC6B	100	98.109	Pan_paniscus
ENSECAG00000009759	TNRC6B	100	100.000	ENSPPRG00000017741	TNRC6B	100	98.937	Panthera_pardus
ENSECAG00000009759	TNRC6B	97	93.934	ENSPTIG00000022064	TNRC6B	98	95.495	Panthera_tigris_altaica
ENSECAG00000009759	TNRC6B	100	99.500	ENSPTRG00000047826	TNRC6B	100	97.762	Pan_troglodytes
ENSECAG00000009759	TNRC6B	98	99.500	ENSPANG00000009271	TNRC6B	96	99.500	Papio_anubis
ENSECAG00000009759	TNRC6B	99	94.500	ENSPSIG00000005318	TNRC6B	95	94.500	Pelodiscus_sinensis
ENSECAG00000009759	TNRC6B	99	96.000	ENSPEMG00000011403	Tnrc6b	100	95.055	Peromyscus_maniculatus_bairdii
ENSECAG00000009759	TNRC6B	99	91.500	ENSPCIG00000020347	TNRC6B	96	91.500	Phascolarctos_cinereus
ENSECAG00000009759	TNRC6B	90	59.574	ENSPFOG00000006033	-	53	50.954	Poecilia_formosa
ENSECAG00000009759	TNRC6B	65	45.065	ENSPLAG00000001418	-	92	46.275	Poecilia_latipinna
ENSECAG00000009759	TNRC6B	99	99.500	ENSPPYG00000011849	TNRC6B	96	99.500	Pongo_abelii
ENSECAG00000009759	TNRC6B	70	98.857	ENSPCAG00000008739	TNRC6B	69	98.857	Procavia_capensis
ENSECAG00000009759	TNRC6B	100	99.000	ENSPCOG00000020790	TNRC6B	100	97.765	Propithecus_coquereli
ENSECAG00000009759	TNRC6B	93	97.561	ENSPVAG00000004975	TNRC6B	94	97.561	Pteropus_vampyrus
ENSECAG00000009759	TNRC6B	73	79.167	ENSPNAG00000011713	tnrc6b	68	79.167	Pygocentrus_nattereri
ENSECAG00000009759	TNRC6B	99	97.000	ENSRNOG00000024907	Tnrc6b	100	94.630	Rattus_norvegicus
ENSECAG00000009759	TNRC6B	100	99.500	ENSRBIG00000035576	TNRC6B	99	97.294	Rhinopithecus_bieti
ENSECAG00000009759	TNRC6B	100	99.500	ENSRROG00000031135	TNRC6B	100	97.176	Rhinopithecus_roxellana
ENSECAG00000009759	TNRC6B	99	99.500	ENSSBOG00000029743	TNRC6B	96	99.500	Saimiri_boliviensis_boliviensis
ENSECAG00000009759	TNRC6B	99	88.557	ENSSHAG00000009692	TNRC6B	99	88.161	Sarcophilus_harrisii
ENSECAG00000009759	TNRC6B	65	95.500	ENSSARG00000007971	-	70	95.455	Sorex_araneus
ENSECAG00000009759	TNRC6B	92	96.000	ENSSPUG00000010801	TNRC6B	96	96.000	Sphenodon_punctatus
ENSECAG00000009759	TNRC6B	100	98.500	ENSSSCG00000000078	TNRC6B	100	98.130	Sus_scrofa
ENSECAG00000009759	TNRC6B	92	98.837	ENSTGUG00000010138	-	95	98.837	Taeniopygia_guttata
ENSECAG00000009759	TNRC6B	99	99.500	ENSTTRG00000011465	TNRC6B	98	99.000	Tursiops_truncatus
ENSECAG00000009759	TNRC6B	99	99.000	ENSUAMG00000007174	TNRC6B	100	96.694	Ursus_americanus
ENSECAG00000009759	TNRC6B	100	99.000	ENSUMAG00000014336	TNRC6B	100	98.812	Ursus_maritimus
ENSECAG00000009759	TNRC6B	66	100.000	ENSVPAG00000001467	TNRC6B	67	100.000	Vicugna_pacos
ENSECAG00000009759	TNRC6B	100	99.500	ENSVVUG00000007064	TNRC6B	100	98.879	Vulpes_vulpes