EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSECAG00000009889 (Gene tree)
Gene ID: 100052554
Gene Symbol: CNOT1
Alias: -
Full Name: CCR4-NOT transcription complex subunit 1
Gene Type: protein_coding
Species: Equus_caballus
Status: putative
Strand: Minus strand
Length: 112659 bases
Position: chr3:11211692-11324350
Accession: 16673
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSECAP00000032459	Not1	PF04054.15	1.2e-152	1	1
ENSECAP00000041119	Not1	PF04054.15	1.4e-152	1	1
ENSECAP00000024263	Not1	PF04054.15	1.4e-152	1	1
ENSECAP00000008876	Not1	PF04054.15	1.4e-152	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSECAT00000064029	-	7113	-	ENSECAP00000041119	2312 (aa)	-	-
ENSECAT00000011364	-	7400	-	ENSECAP00000008876	2376 (aa)	XP_023492872	F7D065
ENSECAT00000044654	-	7410	-	ENSECAP00000032459	2141 (aa)	-	-
ENSECAT00000036574	-	7014	-	ENSECAP00000024263	2337 (aa)	-	-

Gene Model

Click here to download ENSECAG00000009889's gene model file

Pathways

Pathway ID	Pathway Name	Source
ecb03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSECAG00000009889's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSECAG00000009889	CNOT1	100	99.813	ENSG00000125107	CNOT1	100	100.000	Homo_sapiens
ENSECAG00000009889	CNOT1	97	96.914	ENSAPOG00000005042	cnot1	100	96.914	Acanthochromis_polyacanthus
ENSECAG00000009889	CNOT1	100	99.621	ENSAMEG00000017298	CNOT1	100	99.621	Ailuropoda_melanoleuca
ENSECAG00000009889	CNOT1	100	89.935	ENSACIG00000016003	cnot1	97	95.231	Amphilophus_citrinellus
ENSECAG00000009889	CNOT1	100	90.638	ENSAPEG00000022342	cnot1	100	90.722	Amphiprion_percula
ENSECAG00000009889	CNOT1	97	97.055	ENSATEG00000012892	cnot1	100	97.055	Anabas_testudineus
ENSECAG00000009889	CNOT1	100	97.773	ENSAPLG00000007162	CNOT1	100	97.773	Anas_platyrhynchos
ENSECAG00000009889	CNOT1	90	98.780	ENSACAG00000001602	CNOT1	98	96.336	Anolis_carolinensis
ENSECAG00000009889	CNOT1	100	96.900	ENSANAG00000038198	CNOT1	100	96.900	Aotus_nancymaae
ENSECAG00000009889	CNOT1	97	97.055	ENSACLG00000014234	cnot1	100	97.055	Astatotilapia_calliptera
ENSECAG00000009889	CNOT1	100	90.913	ENSAMXG00000013170	cnot1	100	91.463	Astyanax_mexicanus
ENSECAG00000009889	CNOT1	100	99.907	ENSBTAG00000020782	CNOT1	100	99.874	Bos_taurus
ENSECAG00000009889	CNOT1	90	40.440	WBGene00002845	let-711	92	54.430	Caenorhabditis_elegans
ENSECAG00000009889	CNOT1	100	99.813	ENSCJAG00000011318	CNOT1	100	99.747	Callithrix_jacchus
ENSECAG00000009889	CNOT1	100	99.538	ENSCAFG00000008426	CNOT1	100	99.538	Canis_familiaris
ENSECAG00000009889	CNOT1	100	98.784	ENSCAFG00020010156	CNOT1	100	99.487	Canis_lupus_dingo
ENSECAG00000009889	CNOT1	100	99.907	ENSCHIG00000010452	CNOT1	100	99.874	Capra_hircus
ENSECAG00000009889	CNOT1	100	99.916	ENSTSYG00000006888	CNOT1	100	99.916	Carlito_syrichta
ENSECAG00000009889	CNOT1	100	95.118	ENSCPOG00000013026	CNOT1	100	95.118	Cavia_porcellus
ENSECAG00000009889	CNOT1	100	99.829	ENSCCAG00000026333	CNOT1	100	99.829	Cebus_capucinus
ENSECAG00000009889	CNOT1	100	99.860	ENSCATG00000032625	CNOT1	100	99.832	Cercocebus_atys
ENSECAG00000009889	CNOT1	100	99.790	ENSCLAG00000006289	CNOT1	100	99.790	Chinchilla_lanigera
ENSECAG00000009889	CNOT1	100	99.860	ENSCSAG00000004731	CNOT1	100	99.832	Chlorocebus_sabaeus
ENSECAG00000009889	CNOT1	81	100.000	ENSCHOG00000009712	CNOT1	83	100.000	Choloepus_hoffmanni
ENSECAG00000009889	CNOT1	98	99.579	ENSCPBG00000026222	CNOT1	99	98.611	Chrysemys_picta_bellii
ENSECAG00000009889	CNOT1	100	60.111	ENSCING00000009149	-	100	59.208	Ciona_intestinalis
ENSECAG00000009889	CNOT1	89	78.273	ENSCSAVG00000002414	-	97	78.273	Ciona_savignyi
ENSECAG00000009889	CNOT1	100	97.702	ENSCANG00000040534	CNOT1	100	97.702	Colobus_angolensis_palliatus
ENSECAG00000009889	CNOT1	100	99.537	ENSCGRG00001016365	Cnot1	100	99.537	Cricetulus_griseus_chok1gshd
ENSECAG00000009889	CNOT1	100	99.537	ENSCGRG00000001714	Cnot1	100	99.537	Cricetulus_griseus_crigri
ENSECAG00000009889	CNOT1	100	89.664	ENSCVAG00000018930	cnot1	100	89.621	Cyprinodon_variegatus
ENSECAG00000009889	CNOT1	100	89.983	ENSDARG00000004174	cnot1	100	89.983	Danio_rerio
ENSECAG00000009889	CNOT1	100	97.308	ENSDNOG00000013250	CNOT1	100	97.308	Dasypus_novemcinctus
ENSECAG00000009889	CNOT1	99	48.410	FBgn0085436	Not1	99	48.212	Drosophila_melanogaster
ENSECAG00000009889	CNOT1	86	97.590	ENSETEG00000012806	CNOT1	84	97.590	Echinops_telfairi
ENSECAG00000009889	CNOT1	83	76.831	ENSEBUG00000011534	cnot1	95	76.831	Eptatretus_burgeri
ENSECAG00000009889	CNOT1	97	99.259	ENSEASG00005005819	CNOT1	100	98.802	Equus_asinus_asinus
ENSECAG00000009889	CNOT1	90	99.608	ENSEEUG00000006015	CNOT1	90	99.608	Erinaceus_europaeus
ENSECAG00000009889	CNOT1	100	89.776	ENSELUG00000014085	cnot1	100	89.500	Esox_lucius
ENSECAG00000009889	CNOT1	100	99.907	ENSFCAG00000025155	CNOT1	100	99.622	Felis_catus
ENSECAG00000009889	CNOT1	100	97.811	ENSFALG00000007285	CNOT1	100	97.811	Ficedula_albicollis
ENSECAG00000009889	CNOT1	100	99.705	ENSFDAG00000013399	CNOT1	100	99.705	Fukomys_damarensis
ENSECAG00000009889	CNOT1	100	90.382	ENSFHEG00000020574	cnot1	100	90.340	Fundulus_heteroclitus
ENSECAG00000009889	CNOT1	91	89.449	ENSGMOG00000012864	cnot1	100	89.773	Gadus_morhua
ENSECAG00000009889	CNOT1	100	97.854	ENSGALG00000002301	CNOT1	100	97.854	Gallus_gallus
ENSECAG00000009889	CNOT1	100	96.213	ENSGAFG00000015005	cnot1	97	96.213	Gambusia_affinis
ENSECAG00000009889	CNOT1	91	90.194	ENSGACG00000002606	cnot1	100	95.752	Gasterosteus_aculeatus
ENSECAG00000009889	CNOT1	100	99.579	ENSGAGG00000022646	CNOT1	100	97.939	Gopherus_agassizii
ENSECAG00000009889	CNOT1	100	99.813	ENSGGOG00000009547	CNOT1	100	99.747	Gorilla_gorilla
ENSECAG00000009889	CNOT1	97	97.055	ENSHBUG00000001729	cnot1	100	97.055	Haplochromis_burtoni
ENSECAG00000009889	CNOT1	100	99.621	ENSHGLG00000014322	CNOT1	100	99.621	Heterocephalus_glaber_female
ENSECAG00000009889	CNOT1	100	89.423	ENSHCOG00000006501	cnot1	100	89.562	Hippocampus_comes
ENSECAG00000009889	CNOT1	100	88.884	ENSIPUG00000011915	cnot1	100	89.346	Ictalurus_punctatus
ENSECAG00000009889	CNOT1	100	99.705	ENSSTOG00000005490	CNOT1	100	99.705	Ictidomys_tridecemlineatus
ENSECAG00000009889	CNOT1	100	99.206	ENSJJAG00000000633	Cnot1	100	99.116	Jaculus_jaculus
ENSECAG00000009889	CNOT1	100	90.255	ENSKMAG00000006149	cnot1	100	90.092	Kryptolebias_marmoratus
ENSECAG00000009889	CNOT1	95	96.407	ENSLBEG00000004740	cnot1	100	96.407	Labrus_bergylta
ENSECAG00000009889	CNOT1	100	99.018	ENSLACG00000010869	CNOT1	97	99.018	Latimeria_chalumnae
ENSECAG00000009889	CNOT1	100	97.195	ENSLOCG00000006324	cnot1	97	97.195	Lepisosteus_oculatus
ENSECAG00000009889	CNOT1	100	99.673	ENSLAFG00000000098	CNOT1	100	99.664	Loxodonta_africana
ENSECAG00000009889	CNOT1	100	99.580	ENSMFAG00000035888	CNOT1	100	99.579	Macaca_fascicularis
ENSECAG00000009889	CNOT1	100	99.813	ENSMMUG00000014625	CNOT1	100	99.790	Macaca_mulatta
ENSECAG00000009889	CNOT1	100	99.860	ENSMNEG00000031820	CNOT1	100	99.860	Macaca_nemestrina
ENSECAG00000009889	CNOT1	100	98.401	ENSMLEG00000040933	CNOT1	100	98.401	Mandrillus_leucophaeus
ENSECAG00000009889	CNOT1	100	89.467	ENSMAMG00000016524	cnot1	100	89.421	Mastacembelus_armatus
ENSECAG00000009889	CNOT1	97	97.055	ENSMZEG00005016210	cnot1	100	97.055	Maylandia_zebra
ENSECAG00000009889	CNOT1	100	97.601	ENSMGAG00000001908	CNOT1	100	97.601	Meleagris_gallopavo
ENSECAG00000009889	CNOT1	100	99.705	ENSMICG00000007071	CNOT1	100	99.705	Microcebus_murinus
ENSECAG00000009889	CNOT1	100	99.579	ENSMOCG00000017969	Cnot1	100	99.579	Microtus_ochrogaster
ENSECAG00000009889	CNOT1	97	93.689	ENSMMOG00000019134	cnot1	100	93.689	Mola_mola
ENSECAG00000009889	CNOT1	100	98.023	ENSMODG00000014199	CNOT1	100	98.023	Monodelphis_domestica
ENSECAG00000009889	CNOT1	100	90.256	ENSMALG00000008645	cnot1	100	90.256	Monopterus_albus
ENSECAG00000009889	CNOT1	98	99.048	MGP_CAROLIEiJ_G0031430	Cnot1	92	99.889	Mus_caroli
ENSECAG00000009889	CNOT1	100	99.626	ENSMUSG00000036550	Cnot1	100	99.621	Mus_musculus
ENSECAG00000009889	CNOT1	100	99.580	MGP_PahariEiJ_G0023028	Cnot1	100	99.579	Mus_pahari
ENSECAG00000009889	CNOT1	100	99.626	MGP_SPRETEiJ_G0032549	Cnot1	100	99.621	Mus_spretus
ENSECAG00000009889	CNOT1	100	99.916	ENSMPUG00000004830	CNOT1	100	99.916	Mustela_putorius_furo
ENSECAG00000009889	CNOT1	100	99.242	ENSMLUG00000003728	CNOT1	100	99.242	Myotis_lucifugus
ENSECAG00000009889	CNOT1	100	99.766	ENSNGAG00000018628	Cnot1	100	99.747	Nannospalax_galili
ENSECAG00000009889	CNOT1	96	97.055	ENSNBRG00000019358	cnot1	100	97.055	Neolamprologus_brichardi
ENSECAG00000009889	CNOT1	100	99.720	ENSNLEG00000003566	CNOT1	100	99.705	Nomascus_leucogenys
ENSECAG00000009889	CNOT1	88	98.824	ENSMEUG00000006145	CNOT1	88	98.658	Notamacropus_eugenii
ENSECAG00000009889	CNOT1	90	100.000	ENSOPRG00000005604	CNOT1	86	100.000	Ochotona_princeps
ENSECAG00000009889	CNOT1	100	99.663	ENSODEG00000016337	CNOT1	100	99.663	Octodon_degus
ENSECAG00000009889	CNOT1	100	90.578	ENSONIG00000007358	cnot1	100	90.171	Oreochromis_niloticus
ENSECAG00000009889	CNOT1	99	98.496	ENSOANG00000012109	CNOT1	100	98.496	Ornithorhynchus_anatinus
ENSECAG00000009889	CNOT1	100	99.832	ENSOCUG00000006911	CNOT1	100	99.832	Oryctolagus_cuniculus
ENSECAG00000009889	CNOT1	100	90.650	ENSORLG00000013734	cnot1	100	90.604	Oryzias_latipes
ENSECAG00000009889	CNOT1	100	88.996	ENSORLG00020017012	cnot1	100	88.758	Oryzias_latipes_hni
ENSECAG00000009889	CNOT1	100	88.828	ENSORLG00015007091	cnot1	100	88.339	Oryzias_latipes_hsok
ENSECAG00000009889	CNOT1	100	88.124	ENSOMEG00000015124	cnot1	100	88.413	Oryzias_melastigma
ENSECAG00000009889	CNOT1	100	99.747	ENSOGAG00000000543	CNOT1	100	99.747	Otolemur_garnettii
ENSECAG00000009889	CNOT1	100	99.907	ENSOARG00000001567	CNOT1	100	99.874	Ovis_aries
ENSECAG00000009889	CNOT1	100	99.813	ENSPPAG00000022013	CNOT1	100	99.790	Pan_paniscus
ENSECAG00000009889	CNOT1	100	99.916	ENSPPRG00000004867	CNOT1	100	99.916	Panthera_pardus
ENSECAG00000009889	CNOT1	100	99.916	ENSPTIG00000012589	CNOT1	100	99.916	Panthera_tigris_altaica
ENSECAG00000009889	CNOT1	100	99.496	ENSPTRG00000008183	CNOT1	100	99.496	Pan_troglodytes
ENSECAG00000009889	CNOT1	100	96.270	ENSPANG00000020901	CNOT1	100	96.270	Papio_anubis
ENSECAG00000009889	CNOT1	100	92.111	ENSPKIG00000023538	CNOT1	100	92.279	Paramormyrops_kingsleyae
ENSECAG00000009889	CNOT1	97	93.258	ENSPKIG00000002914	CNOT1	99	93.258	Paramormyrops_kingsleyae
ENSECAG00000009889	CNOT1	100	99.439	ENSPSIG00000005499	CNOT1	100	97.811	Pelodiscus_sinensis
ENSECAG00000009889	CNOT1	100	81.154	ENSPMAG00000009381	cnot1	100	81.024	Petromyzon_marinus
ENSECAG00000009889	CNOT1	100	97.717	ENSPCIG00000007343	CNOT1	100	98.611	Phascolarctos_cinereus
ENSECAG00000009889	CNOT1	99	89.767	ENSPFOG00000003497	cnot1	100	89.725	Poecilia_formosa
ENSECAG00000009889	CNOT1	95	96.008	ENSPLAG00000014018	cnot1	100	96.008	Poecilia_latipinna
ENSECAG00000009889	CNOT1	95	96.008	ENSPMEG00000005868	cnot1	100	96.008	Poecilia_mexicana
ENSECAG00000009889	CNOT1	95	96.008	ENSPREG00000018793	cnot1	100	96.008	Poecilia_reticulata
ENSECAG00000009889	CNOT1	100	99.766	ENSPPYG00000007410	CNOT1	100	99.747	Pongo_abelii
ENSECAG00000009889	CNOT1	92	97.785	ENSPCAG00000003241	CNOT1	90	97.785	Procavia_capensis
ENSECAG00000009889	CNOT1	100	99.454	ENSPCOG00000027139	CNOT1	100	99.454	Propithecus_coquereli
ENSECAG00000009889	CNOT1	100	97.264	ENSPVAG00000004243	CNOT1	100	97.264	Pteropus_vampyrus
ENSECAG00000009889	CNOT1	97	97.055	ENSPNYG00000012919	cnot1	100	97.055	Pundamilia_nyererei
ENSECAG00000009889	CNOT1	100	89.903	ENSPNAG00000000246	cnot1	100	90.324	Pygocentrus_nattereri
ENSECAG00000009889	CNOT1	100	99.537	ENSRNOG00000012271	Cnot1	100	99.537	Rattus_norvegicus
ENSECAG00000009889	CNOT1	99	99.481	ENSRBIG00000044598	CNOT1	100	97.482	Rhinopithecus_bieti
ENSECAG00000009889	CNOT1	100	99.860	ENSRROG00000000906	CNOT1	100	99.832	Rhinopithecus_roxellana
ENSECAG00000009889	CNOT1	58	31.373	YCR093W	CDC39	68	34.074	Saccharomyces_cerevisiae
ENSECAG00000009889	CNOT1	100	95.354	ENSSBOG00000029155	CNOT1	100	95.354	Saimiri_boliviensis_boliviensis
ENSECAG00000009889	CNOT1	100	98.192	ENSSHAG00000012187	CNOT1	100	98.192	Sarcophilus_harrisii
ENSECAG00000009889	CNOT1	100	90.608	ENSSFOG00015017614	cnot1	100	90.352	Scleropages_formosus
ENSECAG00000009889	CNOT1	97	97.055	ENSSMAG00000013844	cnot1	100	97.055	Scophthalmus_maximus
ENSECAG00000009889	CNOT1	97	96.914	ENSSDUG00000021491	cnot1	100	96.914	Seriola_dumerili
ENSECAG00000009889	CNOT1	97	96.914	ENSSLDG00000014816	cnot1	100	96.914	Seriola_lalandi_dorsalis
ENSECAG00000009889	CNOT1	86	100.000	ENSSARG00000000762	CNOT1	88	100.000	Sorex_araneus
ENSECAG00000009889	CNOT1	100	90.642	ENSSPAG00000018802	cnot1	100	90.390	Stegastes_partitus
ENSECAG00000009889	CNOT1	100	99.860	ENSSSCG00000002799	CNOT1	100	99.747	Sus_scrofa
ENSECAG00000009889	CNOT1	100	97.688	ENSTGUG00000005919	CNOT1	100	97.688	Taeniopygia_guttata
ENSECAG00000009889	CNOT1	100	89.111	ENSTNIG00000018706	cnot1	100	88.875	Tetraodon_nigroviridis
ENSECAG00000009889	CNOT1	82	100.000	ENSTBEG00000000720	CNOT1	80	100.000	Tupaia_belangeri
ENSECAG00000009889	CNOT1	95	99.592	ENSTTRG00000008460	CNOT1	95	99.592	Tursiops_truncatus
ENSECAG00000009889	CNOT1	100	99.916	ENSUAMG00000009251	CNOT1	100	99.916	Ursus_americanus
ENSECAG00000009889	CNOT1	100	99.916	ENSUMAG00000021291	CNOT1	100	99.916	Ursus_maritimus
ENSECAG00000009889	CNOT1	97	97.462	ENSVPAG00000008846	CNOT1	97	97.462	Vicugna_pacos
ENSECAG00000009889	CNOT1	100	98.784	ENSVVUG00000024037	CNOT1	100	99.487	Vulpes_vulpes
ENSECAG00000009889	CNOT1	100	90.302	ENSXETG00000015900	cnot1	100	90.092	Xenopus_tropicalis
ENSECAG00000009889	CNOT1	100	89.337	ENSXCOG00000013552	cnot1	100	89.337	Xiphophorus_couchianus
ENSECAG00000009889	CNOT1	100	89.379	ENSXMAG00000006031	cnot1	100	89.379	Xiphophorus_maculatus