EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSECAG00000010012 (Gene tree)
Gene ID: 100050189
Gene Symbol: POP5
Alias: -
Full Name: POP5 homolog%2C ribonuclease P/MRP subunit
Gene Type: protein_coding
Species: Equus_caballus
Status: putative
Strand: Plus strand
Length: 2297 bases
Position: chr8:15995317-15997613
Accession: 21699
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSECAP00000007991	RNase_P_Rpp14	PF01900.19	1.2e-24	1	1
ENSECAP00000007967	RNase_P_Rpp14	PF01900.19	1.4e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSECAT00000010367	-	803	-	ENSECAP00000007991	170 (aa)	XP_001488664	F7B3D5
ENSECAT00000010337	-	845	-	ENSECAP00000007967	184 (aa)	-	F7B7M9

Gene Model

Click here to download ENSECAG00000010012's gene model file

Pathways

Pathway ID	Pathway Name	Source
ecb03008	Ribosome biogenesis in eukaryotes	KEGG
ecb03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSECAG00000010012's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSECAG00000010012	POP5	87	95.946	ENSG00000167272	POP5	100	87.059	Homo_sapiens
ENSECAG00000010012	POP5	88	54.362	ENSAPOG00000023686	POP5	85	54.930	Acanthochromis_polyacanthus
ENSECAG00000010012	POP5	100	89.535	ENSAMEG00000008503	POP5	100	89.535	Ailuropoda_melanoleuca
ENSECAG00000010012	POP5	97	50.303	ENSACIG00000018362	pop5	86	56.643	Amphilophus_citrinellus
ENSECAG00000010012	POP5	91	52.597	ENSAOCG00000001930	pop5	85	54.225	Amphiprion_ocellaris
ENSECAG00000010012	POP5	91	52.597	ENSAPEG00000006795	pop5	85	54.225	Amphiprion_percula
ENSECAG00000010012	POP5	91	53.896	ENSATEG00000016792	pop5	85	56.338	Anabas_testudineus
ENSECAG00000010012	POP5	52	73.034	ENSAPLG00000015761	POP5	82	73.034	Anas_platyrhynchos
ENSECAG00000010012	POP5	98	56.287	ENSACAG00000003091	POP5	87	60.959	Anolis_carolinensis
ENSECAG00000010012	POP5	87	94.595	ENSANAG00000023744	POP5	100	85.294	Aotus_nancymaae
ENSECAG00000010012	POP5	89	55.629	ENSACLG00000021131	-	84	56.338	Astatotilapia_calliptera
ENSECAG00000010012	POP5	88	54.305	ENSAMXG00000038175	pop5	83	55.245	Astyanax_mexicanus
ENSECAG00000010012	POP5	100	91.765	ENSBTAG00000005385	POP5	100	91.765	Bos_taurus
ENSECAG00000010012	POP5	87	95.270	ENSCJAG00000001309	POP5	100	85.882	Callithrix_jacchus
ENSECAG00000010012	POP5	100	91.765	ENSCAFG00000010389	POP5	100	91.765	Canis_familiaris
ENSECAG00000010012	POP5	100	91.765	ENSCAFG00020020663	POP5	100	91.765	Canis_lupus_dingo
ENSECAG00000010012	POP5	100	92.941	ENSCHIG00000016402	POP5	100	92.941	Capra_hircus
ENSECAG00000010012	POP5	100	93.529	ENSTSYG00000027616	POP5	100	93.529	Carlito_syrichta
ENSECAG00000010012	POP5	68	91.304	ENSCAPG00000016873	POP5	100	84.348	Cavia_aperea
ENSECAG00000010012	POP5	100	90.588	ENSCPOG00000012337	POP5	100	85.882	Cavia_porcellus
ENSECAG00000010012	POP5	87	94.595	ENSCCAG00000023154	POP5	100	85.882	Cebus_capucinus
ENSECAG00000010012	POP5	87	95.946	ENSCATG00000036825	POP5	100	87.059	Cercocebus_atys
ENSECAG00000010012	POP5	100	92.353	ENSCLAG00000007808	POP5	100	90.000	Chinchilla_lanigera
ENSECAG00000010012	POP5	87	95.946	ENSCSAG00000002246	POP5	100	86.471	Chlorocebus_sabaeus
ENSECAG00000010012	POP5	85	76.552	ENSCHOG00000013969	POP5	100	75.882	Choloepus_hoffmanni
ENSECAG00000010012	POP5	96	66.463	ENSCPBG00000011331	POP5	87	68.493	Chrysemys_picta_bellii
ENSECAG00000010012	POP5	87	95.270	ENSCANG00000028001	POP5	100	85.882	Colobus_angolensis_palliatus
ENSECAG00000010012	POP5	100	87.059	ENSCGRG00001017974	Pop5	100	85.294	Cricetulus_griseus_chok1gshd
ENSECAG00000010012	POP5	100	87.059	ENSCGRG00000010102	Pop5	100	85.294	Cricetulus_griseus_crigri
ENSECAG00000010012	POP5	91	53.247	ENSCSEG00000008332	-	81	57.037	Cynoglossus_semilaevis
ENSECAG00000010012	POP5	81	56.934	ENSCSEG00000011103	pop5	91	57.353	Cynoglossus_semilaevis
ENSECAG00000010012	POP5	89	37.500	ENSCVAG00000009152	-	83	39.161	Cyprinodon_variegatus
ENSECAG00000010012	POP5	91	51.923	ENSDARG00000053452	pop5	98	49.398	Danio_rerio
ENSECAG00000010012	POP5	100	91.279	ENSDNOG00000012668	-	90	91.279	Dasypus_novemcinctus
ENSECAG00000010012	POP5	100	92.941	ENSDNOG00000045952	-	100	92.941	Dasypus_novemcinctus
ENSECAG00000010012	POP5	100	89.412	ENSDORG00000029401	Pop5	100	85.882	Dipodomys_ordii
ENSECAG00000010012	POP5	84	30.282	FBgn0036696	CG14057	95	30.282	Drosophila_melanogaster
ENSECAG00000010012	POP5	98	83.735	ENSETEG00000009283	POP5	98	81.928	Echinops_telfairi
ENSECAG00000010012	POP5	86	41.497	ENSEBUG00000016369	pop5	89	41.781	Eptatretus_burgeri
ENSECAG00000010012	POP5	100	98.824	ENSEASG00005004714	POP5	100	98.824	Equus_asinus_asinus
ENSECAG00000010012	POP5	92	56.173	ENSELUG00000023394	pop5	88	59.859	Esox_lucius
ENSECAG00000010012	POP5	100	90.588	ENSFCAG00000042614	POP5	100	90.588	Felis_catus
ENSECAG00000010012	POP5	89	69.737	ENSFALG00000007537	POP5	85	71.831	Ficedula_albicollis
ENSECAG00000010012	POP5	86	92.517	ENSFDAG00000009972	POP5	95	83.929	Fukomys_damarensis
ENSECAG00000010012	POP5	96	52.096	ENSFHEG00000022341	pop5	86	54.225	Fundulus_heteroclitus
ENSECAG00000010012	POP5	76	59.690	ENSGMOG00000001073	pop5	98	59.690	Gadus_morhua
ENSECAG00000010012	POP5	87	61.486	ENSGALG00000007124	POP5	53	60.811	Gallus_gallus
ENSECAG00000010012	POP5	84	57.746	ENSGAFG00000005937	-	93	53.892	Gambusia_affinis
ENSECAG00000010012	POP5	86	56.463	ENSGACG00000012710	-	88	56.944	Gasterosteus_aculeatus
ENSECAG00000010012	POP5	100	65.882	ENSGAGG00000016005	POP5	99	63.529	Gopherus_agassizii
ENSECAG00000010012	POP5	87	95.946	ENSGGOG00000013505	POP5	100	87.059	Gorilla_gorilla
ENSECAG00000010012	POP5	89	55.629	ENSHBUG00000011718	-	85	56.338	Haplochromis_burtoni
ENSECAG00000010012	POP5	100	89.412	ENSHGLG00000011786	POP5	100	85.294	Heterocephalus_glaber_female
ENSECAG00000010012	POP5	100	89.412	ENSHGLG00100014284	POP5	100	85.294	Heterocephalus_glaber_male
ENSECAG00000010012	POP5	88	50.336	ENSHCOG00000011809	pop5	87	52.817	Hippocampus_comes
ENSECAG00000010012	POP5	88	52.000	ENSIPUG00000003437	pop5	100	49.405	Ictalurus_punctatus
ENSECAG00000010012	POP5	100	91.765	ENSSTOG00000012577	POP5	100	91.176	Ictidomys_tridecemlineatus
ENSECAG00000010012	POP5	85	93.056	ENSJJAG00000001080	Pop5	100	85.294	Jaculus_jaculus
ENSECAG00000010012	POP5	86	53.061	ENSKMAG00000011158	-	94	48.824	Kryptolebias_marmoratus
ENSECAG00000010012	POP5	92	51.899	ENSLBEG00000008652	pop5	78	54.225	Labrus_bergylta
ENSECAG00000010012	POP5	92	61.392	ENSLACG00000018188	POP5	88	64.085	Latimeria_chalumnae
ENSECAG00000010012	POP5	88	53.020	ENSLOCG00000002924	pop5	85	53.521	Lepisosteus_oculatus
ENSECAG00000010012	POP5	100	87.791	ENSLAFG00000014545	POP5	100	86.047	Loxodonta_africana
ENSECAG00000010012	POP5	89	96.026	ENSMFAG00000045933	POP5	96	96.026	Macaca_fascicularis
ENSECAG00000010012	POP5	87	95.946	ENSMMUG00000040120	POP5	100	87.059	Macaca_mulatta
ENSECAG00000010012	POP5	87	95.946	ENSMNEG00000041716	POP5	100	87.059	Macaca_nemestrina
ENSECAG00000010012	POP5	87	96.622	ENSMLEG00000029377	POP5	100	87.647	Mandrillus_leucophaeus
ENSECAG00000010012	POP5	84	57.042	ENSMAMG00000002108	pop5	85	57.042	Mastacembelus_armatus
ENSECAG00000010012	POP5	89	55.629	ENSMZEG00005000069	-	85	56.338	Maylandia_zebra
ENSECAG00000010012	POP5	100	87.647	ENSMAUG00000019670	Pop5	100	85.882	Mesocricetus_auratus
ENSECAG00000010012	POP5	100	94.706	ENSMICG00000008692	POP5	100	94.706	Microcebus_murinus
ENSECAG00000010012	POP5	100	78.235	ENSMOCG00000013322	Pop5	100	77.059	Microtus_ochrogaster
ENSECAG00000010012	POP5	85	53.793	ENSMMOG00000010471	pop5	82	54.815	Mola_mola
ENSECAG00000010012	POP5	100	75.294	ENSMODG00000003066	POP5	58	80.986	Monodelphis_domestica
ENSECAG00000010012	POP5	84	56.338	ENSMALG00000017797	-	85	56.338	Monopterus_albus
ENSECAG00000010012	POP5	100	85.882	MGP_CAROLIEiJ_G0027618	Pop5	100	84.706	Mus_caroli
ENSECAG00000010012	POP5	100	85.882	ENSMUSG00000060152	Pop5	100	84.706	Mus_musculus
ENSECAG00000010012	POP5	100	83.529	MGP_PahariEiJ_G0024198	Pop5	100	82.353	Mus_pahari
ENSECAG00000010012	POP5	100	84.706	MGP_SPRETEiJ_G0028616	Pop5	100	83.529	Mus_spretus
ENSECAG00000010012	POP5	88	93.333	ENSMPUG00000003221	POP5	100	87.059	Mustela_putorius_furo
ENSECAG00000010012	POP5	98	92.857	ENSMLUG00000014657	POP5	99	92.857	Myotis_lucifugus
ENSECAG00000010012	POP5	100	88.235	ENSNGAG00000002594	Pop5	99	88.757	Nannospalax_galili
ENSECAG00000010012	POP5	66	56.250	ENSNBRG00000001020	-	83	56.250	Neolamprologus_brichardi
ENSECAG00000010012	POP5	87	95.270	ENSNLEG00000015839	POP5	100	87.059	Nomascus_leucogenys
ENSECAG00000010012	POP5	94	77.019	ENSMEUG00000015288	POP5	100	72.353	Notamacropus_eugenii
ENSECAG00000010012	POP5	86	93.836	ENSOPRG00000004327	POP5	99	90.000	Ochotona_princeps
ENSECAG00000010012	POP5	99	76.923	ENSODEG00000010351	-	100	75.148	Octodon_degus
ENSECAG00000010012	POP5	100	89.412	ENSODEG00000006549	-	100	87.647	Octodon_degus
ENSECAG00000010012	POP5	89	55.629	ENSONIG00000011172	pop5	99	52.695	Oreochromis_niloticus
ENSECAG00000010012	POP5	68	72.174	ENSOANG00000001792	-	100	72.174	Ornithorhynchus_anatinus
ENSECAG00000010012	POP5	99	88.757	ENSOCUG00000006537	POP5	99	88.757	Oryctolagus_cuniculus
ENSECAG00000010012	POP5	96	50.307	ENSORLG00000014745	pop5	86	53.521	Oryzias_latipes
ENSECAG00000010012	POP5	100	49.412	ENSORLG00020001168	pop5	85	53.521	Oryzias_latipes_hni
ENSECAG00000010012	POP5	100	49.708	ENSORLG00015013535	pop5	82	55.396	Oryzias_latipes_hsok
ENSECAG00000010012	POP5	84	54.225	ENSOMEG00000017643	pop5	85	54.225	Oryzias_melastigma
ENSECAG00000010012	POP5	89	91.447	ENSOGAG00000008528	POP5	89	93.103	Otolemur_garnettii
ENSECAG00000010012	POP5	100	91.860	ENSOARG00000012764	POP5	100	91.860	Ovis_aries
ENSECAG00000010012	POP5	87	95.946	ENSPPAG00000043719	POP5	100	87.059	Pan_paniscus
ENSECAG00000010012	POP5	100	90.588	ENSPPRG00000006474	POP5	100	90.588	Panthera_pardus
ENSECAG00000010012	POP5	100	90.588	ENSPTIG00000012194	POP5	100	90.588	Panthera_tigris_altaica
ENSECAG00000010012	POP5	87	95.946	ENSPTRG00000005543	POP5	100	87.059	Pan_troglodytes
ENSECAG00000010012	POP5	87	95.946	ENSPANG00000014166	POP5	100	87.059	Papio_anubis
ENSECAG00000010012	POP5	88	55.705	ENSPKIG00000025154	pop5	87	56.164	Paramormyrops_kingsleyae
ENSECAG00000010012	POP5	68	66.957	ENSPSIG00000013154	POP5	72	76.404	Pelodiscus_sinensis
ENSECAG00000010012	POP5	100	50.000	ENSPMGG00000000812	-	97	50.000	Periophthalmus_magnuspinnatus
ENSECAG00000010012	POP5	100	84.118	ENSPEMG00000017493	Pop5	100	82.941	Peromyscus_maniculatus_bairdii
ENSECAG00000010012	POP5	97	53.293	ENSPFOG00000013000	pop5	94	57.426	Poecilia_formosa
ENSECAG00000010012	POP5	97	52.727	ENSPLAG00000014070	pop5	85	56.338	Poecilia_latipinna
ENSECAG00000010012	POP5	86	56.463	ENSPMEG00000024039	pop5	96	49.708	Poecilia_mexicana
ENSECAG00000010012	POP5	86	56.463	ENSPMEG00000012863	POP5	96	49.708	Poecilia_mexicana
ENSECAG00000010012	POP5	84	57.746	ENSPREG00000020151	pop5	85	57.746	Poecilia_reticulata
ENSECAG00000010012	POP5	87	95.270	ENSPPYG00000005036	POP5	84	85.882	Pongo_abelii
ENSECAG00000010012	POP5	61	91.346	ENSPCAG00000004788	POP5	100	91.346	Procavia_capensis
ENSECAG00000010012	POP5	100	93.529	ENSPCOG00000017618	POP5	100	93.529	Propithecus_coquereli
ENSECAG00000010012	POP5	100	95.294	ENSPVAG00000002233	POP5	100	95.294	Pteropus_vampyrus
ENSECAG00000010012	POP5	89	55.629	ENSPNYG00000002679	pop5	85	56.338	Pundamilia_nyererei
ENSECAG00000010012	POP5	84	52.448	ENSPNAG00000012662	pop5	97	46.821	Pygocentrus_nattereri
ENSECAG00000010012	POP5	94	86.250	ENSRNOG00000001199	Pop5	100	83.529	Rattus_norvegicus
ENSECAG00000010012	POP5	86	94.521	ENSRBIG00000043505	POP5	93	94.521	Rhinopithecus_bieti
ENSECAG00000010012	POP5	87	94.595	ENSRROG00000045063	POP5	93	94.521	Rhinopithecus_roxellana
ENSECAG00000010012	POP5	87	95.270	ENSSBOG00000032691	POP5	100	92.647	Saimiri_boliviensis_boliviensis
ENSECAG00000010012	POP5	88	53.691	ENSSFOG00015005630	pop5	100	51.190	Scleropages_formosus
ENSECAG00000010012	POP5	97	50.299	ENSSMAG00000018868	pop5	82	56.835	Scophthalmus_maximus
ENSECAG00000010012	POP5	92	52.761	ENSSDUG00000001282	-	85	55.634	Seriola_dumerili
ENSECAG00000010012	POP5	96	53.049	ENSSLDG00000017031	pop5	98	53.049	Seriola_lalandi_dorsalis
ENSECAG00000010012	POP5	96	53.049	ENSSLDG00000003801	-	98	53.049	Seriola_lalandi_dorsalis
ENSECAG00000010012	POP5	61	96.154	ENSSARG00000005564	POP5	64	96.154	Sorex_araneus
ENSECAG00000010012	POP5	88	71.812	ENSSPUG00000015531	POP5	96	66.049	Sphenodon_punctatus
ENSECAG00000010012	POP5	84	59.155	ENSSPAG00000015306	pop5	85	59.155	Stegastes_partitus
ENSECAG00000010012	POP5	100	94.118	ENSSSCG00000009912	POP5	100	94.118	Sus_scrofa
ENSECAG00000010012	POP5	94	69.136	ENSTGUG00000009602	POP5	87	72.535	Taeniopygia_guttata
ENSECAG00000010012	POP5	99	51.786	ENSTRUG00000016214	pop5	86	56.338	Takifugu_rubripes
ENSECAG00000010012	POP5	99	51.479	ENSTNIG00000011465	pop5	86	57.639	Tetraodon_nigroviridis
ENSECAG00000010012	POP5	100	91.176	ENSTBEG00000010131	POP5	100	91.176	Tupaia_belangeri
ENSECAG00000010012	POP5	100	93.529	ENSTTRG00000000153	POP5	100	93.529	Tursiops_truncatus
ENSECAG00000010012	POP5	96	89.634	ENSUAMG00000015541	POP5	76	89.634	Ursus_americanus
ENSECAG00000010012	POP5	100	90.000	ENSUMAG00000006137	POP5	100	90.000	Ursus_maritimus
ENSECAG00000010012	POP5	100	92.353	ENSVPAG00000010365	POP5	100	92.353	Vicugna_pacos
ENSECAG00000010012	POP5	100	91.765	ENSVVUG00000021154	POP5	100	91.765	Vulpes_vulpes
ENSECAG00000010012	POP5	67	60.526	ENSXETG00000031793	POP5	83	67.708	Xenopus_tropicalis
ENSECAG00000010012	POP5	84	57.042	ENSXMAG00000003508	-	74	57.042	Xiphophorus_maculatus