EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Description

Ensembl ID: ENSECAG00000010394 (Gene tree)
Gene ID: 100069250
Gene Symbol: RAB27A
Alias: -
Full Name: RAB27A%2C member RAS oncogene family
Gene Type: protein_coding
Species: Equus_caballus
Status: putative
Strand: Plus strand
Length: 69673 bases
Position: chr1:136743345-136813017
Accession: 22100
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSECAP00000016476	Ribosomal_L24e	PF01246.20	4.2e-33	1	1
ENSECAP00000008483	Ribosomal_L24e	PF01246.20	6.2e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSECAT00000020089	-	492	-	ENSECAP00000016476	163 (aa)	XP_023472801	F7A3D9
ENSECAT00000010924	-	992	-	ENSECAP00000008483	284 (aa)	-	F6SEK7

Gene Model

Click here to download ENSECAG00000010394's gene model file

Pathways

Pathway ID	Pathway Name	Source
ecb03010	Ribosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSECAG00000010394's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSECAG00000010394	RAB27A	59	39.286	ENSECAG00000012124	RAB2A	74	39.286
ENSECAG00000010394	RAB27A	59	39.881	ENSECAG00000006219	RAB2B	73	39.881
ENSECAG00000010394	RAB27A	64	36.364	ENSECAG00000022069	RAB9B	88	36.364
ENSECAG00000010394	RAB27A	71	38.942	ENSECAG00000007380	RAB39B	93	38.942
ENSECAG00000010394	RAB27A	63	35.000	ENSECAG00000007384	RAB12	50	35.000
ENSECAG00000010394	RAB27A	64	38.798	ENSECAG00000023191	RAB25	81	38.798
ENSECAG00000010394	RAB27A	100	99.387	ENSECAG00000005903	-	100	99.387
ENSECAG00000010394	RAB27A	58	31.176	ENSECAG00000024595	DNAJC27	59	31.176
ENSECAG00000010394	RAB27A	65	36.216	ENSECAG00000002522	RAB15	80	38.393
ENSECAG00000010394	RAB27A	65	36.170	ENSECAG00000005451	RAB9A	50	36.170
ENSECAG00000010394	RAB27A	57	38.272	ENSECAG00000022694	-	73	38.272
ENSECAG00000010394	RAB27A	57	34.146	ENSECAG00000025054	RAB5C	70	34.146
ENSECAG00000010394	RAB27A	64	36.612	ENSECAG00000017521	RAB18	73	36.612
ENSECAG00000010394	RAB27A	74	32.243	ENSECAG00000023306	RAB5B	90	32.243
ENSECAG00000010394	RAB27A	67	31.217	ENSECAG00000013427	RAB23	75	31.217
ENSECAG00000010394	RAB27A	61	39.306	ENSECAG00000000716	RAB11B	75	39.306
ENSECAG00000010394	RAB27A	63	30.270	ENSECAG00000010046	RHEB	93	30.270
ENSECAG00000010394	RAB27A	95	30.515	ENSECAG00000011518	RAB14	97	30.515
ENSECAG00000010394	RAB27A	64	40.331	ENSECAG00000009926	RAB1A	83	40.331
ENSECAG00000010394	RAB27A	62	34.659	ENSECAG00000019611	RAB33B	65	37.107
ENSECAG00000010394	RAB27A	64	42.077	ENSECAG00000016551	RAB13	85	42.077
ENSECAG00000010394	RAB27A	65	37.037	ENSECAG00000024095	-	66	33.077
ENSECAG00000010394	RAB27A	64	40.884	ENSECAG00000008028	KLC2	85	40.884
ENSECAG00000010394	RAB27A	63	38.674	ENSECAG00000022769	RAB30	89	38.674
ENSECAG00000010394	RAB27A	57	35.366	ENSECAG00000019062	RAB5A	70	35.366
ENSECAG00000010394	RAB27A	64	39.779	ENSECAG00000023865	RAB11A	76	38.251
ENSECAG00000010394	RAB27A	64	36.957	ENSECAG00000012559	RAB7A	82	37.430
ENSECAG00000010394	RAB27A	63	35.196	ENSECAG00000016448	RAB33A	71	35.196