EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSECAG00000010424 (Gene tree)
Gene ID: 100071844
Gene Symbol: A1CF
Alias: -
Full Name: APOBEC1 complementation factor
Gene Type: protein_coding
Species: Equus_caballus
Status: putative
Strand: Minus strand
Length: 48463 bases
Position: chr1:41815374-41863836
Accession: 14881
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSECAP00000008482	DND1_DSRM	PF14709.7	1.7e-24	1	1
ENSECAP00000008482	RRM_1	PF00076.22	2.4e-39	1	3
ENSECAP00000008482	RRM_1	PF00076.22	2.4e-39	2	3
ENSECAP00000008482	RRM_1	PF00076.22	2.4e-39	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSECAT00000010923	-	1794	-	ENSECAP00000008482	597 (aa)	XP_014588868	F6SEL6

Gene Model

Click here to download ENSECAG00000010424's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSECAG00000010424's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSECAG00000010424	A1CF	68	70.476	ENSECAG00000007649	RBM46	85	70.476
ENSECAG00000010424	A1CF	74	58.150	ENSECAG00000004400	RBM47	73	58.206
ENSECAG00000010424	A1CF	51	52.104	ENSECAG00000012464	SYNCRIP	57	51.077
ENSECAG00000010424	A1CF	53	50.307	ENSECAG00000039980	-	73	49.415
ENSECAG00000010424	A1CF	52	51.899	ENSECAG00000013733	HNRNPR	51	51.899

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSECAG00000010424	A1CF	100	95.980	ENSG00000148584	A1CF	100	99.005	Homo_sapiens
ENSECAG00000010424	A1CF	100	73.058	ENSAPOG00000008259	a1cf	100	72.893	Acanthochromis_polyacanthus
ENSECAG00000010424	A1CF	100	96.147	ENSAMEG00000000523	A1CF	100	96.147	Ailuropoda_melanoleuca
ENSECAG00000010424	A1CF	100	75.244	ENSACIG00000008632	a1cf	100	76.384	Amphilophus_citrinellus
ENSECAG00000010424	A1CF	100	73.736	ENSAOCG00000023744	a1cf	93	85.928	Amphiprion_ocellaris
ENSECAG00000010424	A1CF	100	74.715	ENSAPEG00000009537	a1cf	100	75.367	Amphiprion_percula
ENSECAG00000010424	A1CF	100	75.935	ENSATEG00000013720	a1cf	100	77.073	Anabas_testudineus
ENSECAG00000010424	A1CF	100	88.294	ENSAPLG00000002964	A1CF	100	88.127	Anas_platyrhynchos
ENSECAG00000010424	A1CF	100	82.943	ENSACAG00000015269	A1CF	100	82.609	Anolis_carolinensis
ENSECAG00000010424	A1CF	100	95.142	ENSANAG00000019974	A1CF	100	95.142	Aotus_nancymaae
ENSECAG00000010424	A1CF	100	72.964	ENSACLG00000017428	a1cf	100	74.919	Astatotilapia_calliptera
ENSECAG00000010424	A1CF	100	75.207	ENSAMXG00000018180	a1cf	100	75.207	Astyanax_mexicanus
ENSECAG00000010424	A1CF	100	95.645	ENSBTAG00000021195	A1CF	100	96.168	Bos_taurus
ENSECAG00000010424	A1CF	100	96.817	ENSCJAG00000005045	A1CF	100	96.817	Callithrix_jacchus
ENSECAG00000010424	A1CF	100	96.147	ENSCAFG00000015581	A1CF	100	96.147	Canis_familiaris
ENSECAG00000010424	A1CF	100	96.147	ENSCAFG00020026421	A1CF	100	96.147	Canis_lupus_dingo
ENSECAG00000010424	A1CF	100	96.147	ENSCHIG00000020411	A1CF	100	96.147	Capra_hircus
ENSECAG00000010424	A1CF	95	95.406	ENSTSYG00000001755	A1CF	100	94.326	Carlito_syrichta
ENSECAG00000010424	A1CF	100	82.515	ENSCAPG00000017386	A1CF	100	82.515	Cavia_aperea
ENSECAG00000010424	A1CF	100	95.477	ENSCPOG00000009807	A1CF	100	95.310	Cavia_porcellus
ENSECAG00000010424	A1CF	100	96.650	ENSCCAG00000018168	A1CF	100	96.650	Cebus_capucinus
ENSECAG00000010424	A1CF	100	94.305	ENSCATG00000043715	A1CF	100	94.137	Cercocebus_atys
ENSECAG00000010424	A1CF	100	94.983	ENSCLAG00000010424	A1CF	100	94.816	Chinchilla_lanigera
ENSECAG00000010424	A1CF	100	95.980	ENSCSAG00000007032	A1CF	100	95.980	Chlorocebus_sabaeus
ENSECAG00000010424	A1CF	98	91.017	ENSCHOG00000009089	A1CF	98	91.017	Choloepus_hoffmanni
ENSECAG00000010424	A1CF	100	88.127	ENSCPBG00000026464	A1CF	100	87.960	Chrysemys_picta_bellii
ENSECAG00000010424	A1CF	100	96.147	ENSCANG00000038032	A1CF	100	96.147	Colobus_angolensis_palliatus
ENSECAG00000010424	A1CF	100	94.807	ENSCGRG00001017413	A1cf	100	94.640	Cricetulus_griseus_chok1gshd
ENSECAG00000010424	A1CF	100	94.137	ENSCGRG00000017332	A1cf	100	94.305	Cricetulus_griseus_crigri
ENSECAG00000010424	A1CF	100	74.669	ENSCSEG00000002361	a1cf	100	75.788	Cynoglossus_semilaevis
ENSECAG00000010424	A1CF	100	74.472	ENSCVAG00000010520	a1cf	100	75.935	Cyprinodon_variegatus
ENSECAG00000010424	A1CF	100	77.612	ENSDARG00000002968	a1cf	100	78.773	Danio_rerio
ENSECAG00000010424	A1CF	100	95.477	ENSDNOG00000002829	A1CF	100	95.477	Dasypus_novemcinctus
ENSECAG00000010424	A1CF	81	92.754	ENSETEG00000012527	A1CF	81	92.754	Echinops_telfairi
ENSECAG00000010424	A1CF	100	99.497	ENSEASG00005012924	A1CF	100	99.497	Equus_asinus_asinus
ENSECAG00000010424	A1CF	79	81.663	ENSEEUG00000000013	A1CF	97	82.444	Erinaceus_europaeus
ENSECAG00000010424	A1CF	100	77.944	ENSELUG00000003159	a1cf	100	78.773	Esox_lucius
ENSECAG00000010424	A1CF	100	93.300	ENSFCAG00000011179	A1CF	100	93.467	Felis_catus
ENSECAG00000010424	A1CF	100	85.953	ENSFALG00000013183	A1CF	100	85.786	Ficedula_albicollis
ENSECAG00000010424	A1CF	100	92.965	ENSFDAG00000019371	A1CF	100	92.797	Fukomys_damarensis
ENSECAG00000010424	A1CF	100	70.081	ENSFHEG00000019652	a1cf	96	82.812	Fundulus_heteroclitus
ENSECAG00000010424	A1CF	100	71.711	ENSGMOG00000018943	a1cf	100	71.546	Gadus_morhua
ENSECAG00000010424	A1CF	95	88.360	ENSGALG00000003765	A1CF	97	88.183	Gallus_gallus
ENSECAG00000010424	A1CF	100	69.951	ENSGAFG00000014868	a1cf	100	70.772	Gambusia_affinis
ENSECAG00000010424	A1CF	100	73.892	ENSGACG00000010241	a1cf	100	74.056	Gasterosteus_aculeatus
ENSECAG00000010424	A1CF	94	87.965	ENSGAGG00000016508	A1CF	97	87.788	Gopherus_agassizii
ENSECAG00000010424	A1CF	100	96.147	ENSGGOG00000009670	A1CF	100	96.147	Gorilla_gorilla
ENSECAG00000010424	A1CF	100	74.267	ENSHBUG00000021959	a1cf	100	76.059	Haplochromis_burtoni
ENSECAG00000010424	A1CF	100	94.472	ENSHGLG00000008955	A1CF	100	94.807	Heterocephalus_glaber_female
ENSECAG00000010424	A1CF	100	93.802	ENSHGLG00100000518	A1CF	100	94.137	Heterocephalus_glaber_male
ENSECAG00000010424	A1CF	100	69.318	ENSHCOG00000017669	a1cf	100	72.123	Hippocampus_comes
ENSECAG00000010424	A1CF	89	82.649	ENSIPUG00000010367	a1cf	95	82.927	Ictalurus_punctatus
ENSECAG00000010424	A1CF	100	76.911	ENSKMAG00000006568	a1cf	100	77.724	Kryptolebias_marmoratus
ENSECAG00000010424	A1CF	99	74.309	ENSLBEG00000020994	a1cf	98	75.777	Labrus_bergylta
ENSECAG00000010424	A1CF	100	80.699	ENSLACG00000008061	A1CF	100	80.532	Latimeria_chalumnae
ENSECAG00000010424	A1CF	100	81.728	ENSLOCG00000006302	a1cf	100	81.728	Lepisosteus_oculatus
ENSECAG00000010424	A1CF	100	94.975	ENSLAFG00000015462	A1CF	100	94.975	Loxodonta_africana
ENSECAG00000010424	A1CF	100	94.640	ENSMFAG00000035948	A1CF	100	94.472	Macaca_fascicularis
ENSECAG00000010424	A1CF	100	94.640	ENSMMUG00000007077	A1CF	100	94.472	Macaca_mulatta
ENSECAG00000010424	A1CF	100	94.305	ENSMNEG00000031454	A1CF	100	94.137	Macaca_nemestrina
ENSECAG00000010424	A1CF	100	95.980	ENSMLEG00000037223	A1CF	100	95.980	Mandrillus_leucophaeus
ENSECAG00000010424	A1CF	100	73.039	ENSMAMG00000010402	a1cf	100	75.041	Mastacembelus_armatus
ENSECAG00000010424	A1CF	100	75.914	ENSMZEG00005013245	a1cf	100	76.578	Maylandia_zebra
ENSECAG00000010424	A1CF	100	88.481	ENSMGAG00000001507	A1CF	100	88.314	Meleagris_gallopavo
ENSECAG00000010424	A1CF	100	93.802	ENSMAUG00000007422	A1cf	100	93.802	Mesocricetus_auratus
ENSECAG00000010424	A1CF	100	94.147	ENSMICG00000003377	A1CF	100	94.147	Microcebus_murinus
ENSECAG00000010424	A1CF	100	93.970	ENSMOCG00000021536	A1cf	100	93.802	Microtus_ochrogaster
ENSECAG00000010424	A1CF	100	67.210	ENSMMOG00000009422	a1cf	100	68.679	Mola_mola
ENSECAG00000010424	A1CF	92	89.435	ENSMODG00000016478	A1CF	97	90.737	Monodelphis_domestica
ENSECAG00000010424	A1CF	100	72.757	ENSMALG00000012992	a1cf	100	72.093	Monopterus_albus
ENSECAG00000010424	A1CF	100	92.965	MGP_CAROLIEiJ_G0022873	A1cf	100	92.630	Mus_caroli
ENSECAG00000010424	A1CF	100	92.965	ENSMUSG00000052595	A1cf	99	96.053	Mus_musculus
ENSECAG00000010424	A1CF	100	92.462	MGP_PahariEiJ_G0014366	A1cf	100	91.792	Mus_pahari
ENSECAG00000010424	A1CF	100	92.462	MGP_SPRETEiJ_G0023792	A1cf	100	92.127	Mus_spretus
ENSECAG00000010424	A1CF	100	89.112	ENSMPUG00000016971	A1CF	100	89.112	Mustela_putorius_furo
ENSECAG00000010424	A1CF	100	96.147	ENSMLUG00000016071	A1CF	100	96.147	Myotis_lucifugus
ENSECAG00000010424	A1CF	100	94.807	ENSNGAG00000015136	A1cf	100	94.640	Nannospalax_galili
ENSECAG00000010424	A1CF	100	74.593	ENSNBRG00000001712	a1cf	100	76.384	Neolamprologus_brichardi
ENSECAG00000010424	A1CF	100	97.152	ENSNLEG00000012028	A1CF	100	97.152	Nomascus_leucogenys
ENSECAG00000010424	A1CF	94	88.850	ENSMEUG00000015909	A1CF	100	88.850	Notamacropus_eugenii
ENSECAG00000010424	A1CF	88	84.571	ENSOPRG00000010667	A1CF	97	84.659	Ochotona_princeps
ENSECAG00000010424	A1CF	100	74.919	ENSONIG00000019105	a1cf	100	75.896	Oreochromis_niloticus
ENSECAG00000010424	A1CF	78	88.437	ENSOANG00000007360	A1CF	99	88.437	Ornithorhynchus_anatinus
ENSECAG00000010424	A1CF	100	94.305	ENSOCUG00000011587	A1CF	100	93.970	Oryctolagus_cuniculus
ENSECAG00000010424	A1CF	100	74.026	ENSORLG00000013342	a1cf	100	73.871	Oryzias_latipes
ENSECAG00000010424	A1CF	100	75.772	ENSORLG00020000586	a1cf	100	76.136	Oryzias_latipes_hni
ENSECAG00000010424	A1CF	100	75.610	ENSORLG00015018569	a1cf	100	75.974	Oryzias_latipes_hsok
ENSECAG00000010424	A1CF	100	74.510	ENSOMEG00000013531	a1cf	100	74.346	Oryzias_melastigma
ENSECAG00000010424	A1CF	100	93.802	ENSOGAG00000012884	A1CF	100	93.970	Otolemur_garnettii
ENSECAG00000010424	A1CF	100	96.482	ENSOARG00000013695	A1CF	100	96.482	Ovis_aries
ENSECAG00000010424	A1CF	97	94.128	ENSPPAG00000028115	A1CF	100	97.773	Pan_paniscus
ENSECAG00000010424	A1CF	100	95.645	ENSPPRG00000012180	A1CF	100	95.645	Panthera_pardus
ENSECAG00000010424	A1CF	100	95.645	ENSPTIG00000021223	A1CF	100	95.645	Panthera_tigris_altaica
ENSECAG00000010424	A1CF	100	95.980	ENSPTRG00000002508	A1CF	100	95.980	Pan_troglodytes
ENSECAG00000010424	A1CF	100	94.640	ENSPANG00000021988	A1CF	100	94.472	Papio_anubis
ENSECAG00000010424	A1CF	100	79.768	ENSPKIG00000025176	a1cf	100	79.602	Paramormyrops_kingsleyae
ENSECAG00000010424	A1CF	100	86.455	ENSPSIG00000010318	A1CF	100	86.455	Pelodiscus_sinensis
ENSECAG00000010424	A1CF	88	70.857	ENSPMGG00000013359	a1cf	89	71.429	Periophthalmus_magnuspinnatus
ENSECAG00000010424	A1CF	100	94.305	ENSPEMG00000015021	A1cf	100	94.137	Peromyscus_maniculatus_bairdii
ENSECAG00000010424	A1CF	100	88.629	ENSPCIG00000002175	A1CF	100	88.629	Phascolarctos_cinereus
ENSECAG00000010424	A1CF	100	75.772	ENSPFOG00000006683	a1cf	100	77.236	Poecilia_formosa
ENSECAG00000010424	A1CF	100	75.610	ENSPFOG00000007437	-	100	77.073	Poecilia_formosa
ENSECAG00000010424	A1CF	100	74.472	ENSPLAG00000000026	a1cf	100	75.935	Poecilia_latipinna
ENSECAG00000010424	A1CF	100	74.472	ENSPLAG00000001210	-	100	75.935	Poecilia_latipinna
ENSECAG00000010424	A1CF	100	68.352	ENSPMEG00000015529	-	100	69.821	Poecilia_mexicana
ENSECAG00000010424	A1CF	100	67.210	ENSPMEG00000000921	a1cf	100	68.679	Poecilia_mexicana
ENSECAG00000010424	A1CF	100	75.772	ENSPREG00000016298	a1cf	100	77.073	Poecilia_reticulata
ENSECAG00000010424	A1CF	100	95.645	ENSPPYG00000002819	A1CF	100	95.645	Pongo_abelii
ENSECAG00000010424	A1CF	80	73.053	ENSPCAG00000006463	A1CF	79	72.842	Procavia_capensis
ENSECAG00000010424	A1CF	100	96.482	ENSPCOG00000024172	A1CF	100	96.147	Propithecus_coquereli
ENSECAG00000010424	A1CF	100	75.570	ENSPNYG00000017944	a1cf	100	77.362	Pundamilia_nyererei
ENSECAG00000010424	A1CF	100	80.132	ENSPNAG00000007704	a1cf	100	79.967	Pygocentrus_nattereri
ENSECAG00000010424	A1CF	100	91.960	ENSRNOG00000033195	A1cf	100	91.625	Rattus_norvegicus
ENSECAG00000010424	A1CF	100	89.316	ENSRBIG00000042892	A1CF	100	92.398	Rhinopithecus_bieti
ENSECAG00000010424	A1CF	100	96.315	ENSRROG00000041398	A1CF	100	96.315	Rhinopithecus_roxellana
ENSECAG00000010424	A1CF	100	96.817	ENSSBOG00000021930	A1CF	100	96.817	Saimiri_boliviensis_boliviensis
ENSECAG00000010424	A1CF	100	89.967	ENSSHAG00000005096	A1CF	100	89.967	Sarcophilus_harrisii
ENSECAG00000010424	A1CF	100	79.104	ENSSFOG00015011774	a1cf	100	79.270	Scleropages_formosus
ENSECAG00000010424	A1CF	100	74.634	ENSSMAG00000013271	a1cf	100	74.959	Scophthalmus_maximus
ENSECAG00000010424	A1CF	100	75.662	ENSSDUG00000013930	a1cf	100	76.656	Seriola_dumerili
ENSECAG00000010424	A1CF	100	69.687	ENSSLDG00000004290	a1cf	100	69.357	Seriola_lalandi_dorsalis
ENSECAG00000010424	A1CF	95	84.155	ENSSARG00000005940	A1CF	96	84.155	Sorex_araneus
ENSECAG00000010424	A1CF	95	87.215	ENSSPUG00000006797	A1CF	95	87.215	Sphenodon_punctatus
ENSECAG00000010424	A1CF	100	96.985	ENSSSCG00000010431	A1CF	100	96.985	Sus_scrofa
ENSECAG00000010424	A1CF	100	87.960	ENSTGUG00000005090	A1CF	100	87.960	Taeniopygia_guttata
ENSECAG00000010424	A1CF	100	74.267	ENSTRUG00000001982	a1cf	100	73.779	Takifugu_rubripes
ENSECAG00000010424	A1CF	100	74.351	ENSTNIG00000003580	a1cf	100	74.188	Tetraodon_nigroviridis
ENSECAG00000010424	A1CF	97	87.910	ENSTTRG00000013190	A1CF	95	87.737	Tursiops_truncatus
ENSECAG00000010424	A1CF	100	94.807	ENSUAMG00000020065	A1CF	100	94.807	Ursus_americanus
ENSECAG00000010424	A1CF	100	95.645	ENSUMAG00000011162	A1CF	100	95.645	Ursus_maritimus
ENSECAG00000010424	A1CF	87	90.211	ENSVPAG00000006130	A1CF	86	90.211	Vicugna_pacos
ENSECAG00000010424	A1CF	100	94.640	ENSVVUG00000002504	A1CF	100	94.640	Vulpes_vulpes
ENSECAG00000010424	A1CF	100	78.239	ENSXETG00000006611	a1cf	100	77.907	Xenopus_tropicalis
ENSECAG00000010424	A1CF	100	75.777	ENSXCOG00000003302	a1cf	100	76.759	Xiphophorus_couchianus
ENSECAG00000010424	A1CF	100	76.923	ENSXMAG00000016703	a1cf	100	77.905	Xiphophorus_maculatus