EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSECAG00000010440 (Gene tree)
Gene ID: 100071364
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Equus_caballus
Status: putative
Strand: Minus strand
Length: 10110 bases
Position: chr2:30087075-30097184
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSECAP00000008390	SYF2	PF08231.12	1.6e-54	1	1
ENSECAP00000030189	SYF2	PF08231.12	1.6e-54	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSECAT00000056967	-	732	-	ENSECAP00000030189	243 (aa)	-	-
ENSECAT00000010822	-	717	-	ENSECAP00000008390	238 (aa)	-	F6Q557

Gene Model

Click here to download ENSECAG00000010440's gene model file

Pathways

Pathway ID	Pathway Name	Source
ecb03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSECAG00000010440's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSECAG00000010440	-	99	97.881	ENSECAG00000012023	-	96	97.881

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSECAG00000010440	-	98	93.724	ENSG00000117614	SYF2	98	93.724	Homo_sapiens
ENSECAG00000010440	-	92	85.388	ENSAPOG00000001174	syf2	97	81.974	Acanthochromis_polyacanthus
ENSECAG00000010440	-	82	97.949	ENSAMEG00000010134	-	100	97.949	Ailuropoda_melanoleuca
ENSECAG00000010440	-	98	94.492	ENSAMEG00000010115	-	97	94.492	Ailuropoda_melanoleuca
ENSECAG00000010440	-	95	78.970	ENSACIG00000023688	syf2	93	78.970	Amphilophus_citrinellus
ENSECAG00000010440	-	100	81.172	ENSAOCG00000022046	syf2	100	81.172	Amphiprion_ocellaris
ENSECAG00000010440	-	89	81.776	ENSAOCG00000010912	syf2	66	81.776	Amphiprion_ocellaris
ENSECAG00000010440	-	97	83.117	ENSAPEG00000018858	syf2	95	78.543	Amphiprion_percula
ENSECAG00000010440	-	91	83.410	ENSATEG00000007745	syf2	97	79.828	Anabas_testudineus
ENSECAG00000010440	-	84	89.500	ENSAPLG00000016435	SYF2	99	89.500	Anas_platyrhynchos
ENSECAG00000010440	-	69	77.108	ENSACAG00000026777	-	94	77.564	Anolis_carolinensis
ENSECAG00000010440	-	85	85.784	ENSACAG00000013653	-	100	85.784	Anolis_carolinensis
ENSECAG00000010440	-	99	92.149	ENSANAG00000032473	SYF2	99	92.562	Aotus_nancymaae
ENSECAG00000010440	-	92	81.735	ENSACLG00000019916	syf2	95	79.476	Astatotilapia_calliptera
ENSECAG00000010440	-	100	77.869	ENSAMXG00000004051	syf2	100	77.869	Astyanax_mexicanus
ENSECAG00000010440	-	98	95.745	ENSBTAG00000001651	SYF2	99	95.745	Bos_taurus
ENSECAG00000010440	-	87	50.952	WBGene00019402	syf-2	99	47.619	Caenorhabditis_elegans
ENSECAG00000010440	-	96	96.507	ENSCJAG00000046570	SYF2	99	92.975	Callithrix_jacchus
ENSECAG00000010440	-	90	90.741	ENSCAFG00000030331	-	96	88.053	Canis_familiaris
ENSECAG00000010440	-	98	94.068	ENSCAFG00000012895	-	96	94.068	Canis_familiaris
ENSECAG00000010440	-	98	94.068	ENSCAFG00020021091	-	96	94.068	Canis_lupus_dingo
ENSECAG00000010440	-	76	88.462	ENSCAFG00020021094	-	83	96.795	Canis_lupus_dingo
ENSECAG00000010440	-	99	95.763	ENSCHIG00000020874	SYF2	98	95.763	Capra_hircus
ENSECAG00000010440	-	96	94.760	ENSTSYG00000005114	SYF2	94	94.760	Carlito_syrichta
ENSECAG00000010440	-	83	97.475	ENSCAPG00000010006	SYF2	100	97.475	Cavia_aperea
ENSECAG00000010440	-	97	94.397	ENSCPOG00000005326	SYF2	95	94.397	Cavia_porcellus
ENSECAG00000010440	-	99	92.149	ENSCCAG00000022459	SYF2	99	92.975	Cebus_capucinus
ENSECAG00000010440	-	96	95.197	ENSCATG00000026917	SYF2	99	91.736	Cercocebus_atys
ENSECAG00000010440	-	100	93.305	ENSCLAG00000008474	SYF2	98	93.305	Chinchilla_lanigera
ENSECAG00000010440	-	99	91.736	ENSCSAG00000000948	SYF2	99	91.736	Chlorocebus_sabaeus
ENSECAG00000010440	-	75	76.667	ENSCHOG00000005273	-	99	76.667	Choloepus_hoffmanni
ENSECAG00000010440	-	93	90.135	ENSCPBG00000025073	SYF2	98	85.537	Chrysemys_picta_bellii
ENSECAG00000010440	-	88	53.991	ENSCING00000003017	-	89	53.521	Ciona_intestinalis
ENSECAG00000010440	-	88	51.174	ENSCSAVG00000006627	-	97	51.174	Ciona_savignyi
ENSECAG00000010440	-	99	80.083	ENSCANG00000037322	SYF2	99	80.083	Colobus_angolensis_palliatus
ENSECAG00000010440	-	98	93.191	ENSCGRG00001020733	Syf2	98	92.437	Cricetulus_griseus_chok1gshd
ENSECAG00000010440	-	82	95.918	ENSCGRG00000005095	Syf2	96	95.477	Cricetulus_griseus_crigri
ENSECAG00000010440	-	91	78.899	ENSCSEG00000000117	syf2	91	78.899	Cynoglossus_semilaevis
ENSECAG00000010440	-	92	82.648	ENSCVAG00000019543	syf2	97	79.060	Cyprinodon_variegatus
ENSECAG00000010440	-	91	83.945	ENSDARG00000004706	syf2	92	83.945	Danio_rerio
ENSECAG00000010440	-	98	95.319	ENSDNOG00000047605	SYF2	99	92.562	Dasypus_novemcinctus
ENSECAG00000010440	-	98	93.590	ENSDORG00000001274	Syf2	96	93.590	Dipodomys_ordii
ENSECAG00000010440	-	91	58.182	FBgn0033556	CG12343	97	58.182	Drosophila_melanogaster
ENSECAG00000010440	-	90	79.630	ENSETEG00000015729	SYF2	100	76.419	Echinops_telfairi
ENSECAG00000010440	-	82	61.224	ENSEBUG00000015402	syf2	95	61.224	Eptatretus_burgeri
ENSECAG00000010440	-	99	99.149	ENSEASG00005004224	-	96	99.149	Equus_asinus_asinus
ENSECAG00000010440	-	100	82.988	ENSEASG00005004232	-	100	82.988	Equus_asinus_asinus
ENSECAG00000010440	-	74	81.421	ENSEEUG00000015084	SYF2	100	81.421	Erinaceus_europaeus
ENSECAG00000010440	-	91	86.239	ENSELUG00000003465	syf2	94	84.375	Esox_lucius
ENSECAG00000010440	-	98	95.763	ENSFCAG00000010324	-	82	95.763	Felis_catus
ENSECAG00000010440	-	98	95.339	ENSFCAG00000043095	-	96	95.339	Felis_catus
ENSECAG00000010440	-	85	86.275	ENSFALG00000000460	SYF2	93	83.043	Ficedula_albicollis
ENSECAG00000010440	-	99	94.068	ENSFDAG00000008310	SYF2	97	94.068	Fukomys_damarensis
ENSECAG00000010440	-	92	67.580	ENSFHEG00000007238	syf2	97	67.580	Fundulus_heteroclitus
ENSECAG00000010440	-	94	82.143	ENSGMOG00000019138	syf2	100	82.143	Gadus_morhua
ENSECAG00000010440	-	95	88.546	ENSGALG00000013639	SYF2	95	84.937	Gallus_gallus
ENSECAG00000010440	-	97	78.017	ENSGAFG00000019435	syf2	96	78.017	Gambusia_affinis
ENSECAG00000010440	-	90	83.721	ENSGACG00000007305	syf2	96	80.172	Gasterosteus_aculeatus
ENSECAG00000010440	-	93	90.583	ENSGAGG00000010670	SYF2	98	85.597	Gopherus_agassizii
ENSECAG00000010440	-	99	93.277	ENSGGOG00000012796	SYF2	98	94.142	Gorilla_gorilla
ENSECAG00000010440	-	98	78.298	ENSHBUG00000020477	syf2	100	78.112	Haplochromis_burtoni
ENSECAG00000010440	-	99	93.220	ENSHGLG00000014393	SYF2	96	93.220	Heterocephalus_glaber_female
ENSECAG00000010440	-	93	83.408	ENSHGLG00000004304	-	99	78.481	Heterocephalus_glaber_female
ENSECAG00000010440	-	99	93.220	ENSHGLG00100014722	SYF2	96	93.220	Heterocephalus_glaber_male
ENSECAG00000010440	-	98	78.571	ENSHCOG00000012904	syf2	78	78.571	Hippocampus_comes
ENSECAG00000010440	-	98	80.769	ENSIPUG00000019859	syf2	97	80.769	Ictalurus_punctatus
ENSECAG00000010440	-	61	96.575	ENSSTOG00000023984	SYF2	100	96.575	Ictidomys_tridecemlineatus
ENSECAG00000010440	-	83	97.487	ENSJJAG00000013301	Syf2	94	97.487	Jaculus_jaculus
ENSECAG00000010440	-	95	80.702	ENSKMAG00000013856	syf2	95	80.702	Kryptolebias_marmoratus
ENSECAG00000010440	-	92	83.562	ENSLBEG00000014425	syf2	92	83.562	Labrus_bergylta
ENSECAG00000010440	-	91	86.697	ENSLACG00000012064	SYF2	92	86.697	Latimeria_chalumnae
ENSECAG00000010440	-	100	79.339	ENSLOCG00000002728	syf2	95	79.339	Lepisosteus_oculatus
ENSECAG00000010440	-	99	94.515	ENSLAFG00000023150	-	97	94.515	Loxodonta_africana
ENSECAG00000010440	-	76	65.761	ENSLAFG00000030814	-	100	65.761	Loxodonta_africana
ENSECAG00000010440	-	96	95.633	ENSMFAG00000041831	SYF2	99	92.149	Macaca_fascicularis
ENSECAG00000010440	-	99	92.149	ENSMMUG00000002968	SYF2	99	92.149	Macaca_mulatta
ENSECAG00000010440	-	96	95.633	ENSMNEG00000030180	SYF2	99	92.149	Macaca_nemestrina
ENSECAG00000010440	-	96	95.197	ENSMLEG00000030248	SYF2	99	91.736	Mandrillus_leucophaeus
ENSECAG00000010440	-	91	82.028	ENSMAMG00000010403	syf2	94	79.476	Mastacembelus_armatus
ENSECAG00000010440	-	100	77.178	ENSMZEG00005006429	syf2	100	77.178	Maylandia_zebra
ENSECAG00000010440	-	83	89.950	ENSMGAG00000002019	SYF2	100	89.950	Meleagris_gallopavo
ENSECAG00000010440	-	99	92.017	ENSMAUG00000018974	Syf2	98	92.017	Mesocricetus_auratus
ENSECAG00000010440	-	83	96.985	ENSMICG00000016191	SYF2	100	96.985	Microcebus_murinus
ENSECAG00000010440	-	96	94.760	ENSMOCG00000022938	Syf2	94	94.760	Microtus_ochrogaster
ENSECAG00000010440	-	98	76.596	ENSMMOG00000002396	syf2	97	76.596	Mola_mola
ENSECAG00000010440	-	95	87.336	ENSMODG00000013951	-	99	87.719	Monodelphis_domestica
ENSECAG00000010440	-	97	80.172	ENSMALG00000010706	syf2	95	80.172	Monopterus_albus
ENSECAG00000010440	-	98	93.617	MGP_CAROLIEiJ_G0026633	Syf2	96	93.617	Mus_caroli
ENSECAG00000010440	-	98	93.617	ENSMUSG00000028821	Syf2	96	93.617	Mus_musculus
ENSECAG00000010440	-	98	93.617	MGP_PahariEiJ_G0028966	Syf2	96	93.617	Mus_pahari
ENSECAG00000010440	-	98	93.617	MGP_SPRETEiJ_G0027613	Syf2	96	93.617	Mus_spretus
ENSECAG00000010440	-	98	94.915	ENSMPUG00000015801	-	96	94.915	Mustela_putorius_furo
ENSECAG00000010440	-	98	95.339	ENSMPUG00000015802	-	96	95.339	Mustela_putorius_furo
ENSECAG00000010440	-	98	94.444	ENSMLUG00000001885	SYF2	98	93.697	Myotis_lucifugus
ENSECAG00000010440	-	98	93.671	ENSNGAG00000007912	Syf2	96	93.671	Nannospalax_galili
ENSECAG00000010440	-	99	72.034	ENSNBRG00000010720	syf2	97	72.034	Neolamprologus_brichardi
ENSECAG00000010440	-	99	93.277	ENSNLEG00000035185	SYF2	99	92.975	Nomascus_leucogenys
ENSECAG00000010440	-	98	92.340	ENSOPRG00000012870	SYF2	96	92.340	Ochotona_princeps
ENSECAG00000010440	-	96	94.323	ENSODEG00000017664	-	96	94.323	Octodon_degus
ENSECAG00000010440	-	100	82.773	ENSODEG00000014338	-	99	83.544	Octodon_degus
ENSECAG00000010440	-	92	81.735	ENSONIG00000008213	syf2	95	79.476	Oreochromis_niloticus
ENSECAG00000010440	-	84	91.584	ENSOANG00000009552	SYF2	100	91.584	Ornithorhynchus_anatinus
ENSECAG00000010440	-	98	95.745	ENSOCUG00000013050	SYF2	99	93.361	Oryctolagus_cuniculus
ENSECAG00000010440	-	92	83.562	ENSORLG00000028820	syf2	94	83.562	Oryzias_latipes
ENSECAG00000010440	-	92	83.562	ENSORLG00020018333	syf2	92	83.562	Oryzias_latipes_hni
ENSECAG00000010440	-	91	83.486	ENSORLG00015014665	syf2	92	83.486	Oryzias_latipes_hsok
ENSECAG00000010440	-	92	84.475	ENSOMEG00000013911	syf2	92	84.475	Oryzias_melastigma
ENSECAG00000010440	-	99	92.857	ENSOGAG00000009962	SYF2	98	92.857	Otolemur_garnettii
ENSECAG00000010440	-	82	67.179	ENSOARG00000006269	-	100	67.179	Ovis_aries
ENSECAG00000010440	-	98	95.359	ENSOARG00000006348	-	96	95.359	Ovis_aries
ENSECAG00000010440	-	99	93.277	ENSPPAG00000036579	SYF2	98	94.142	Pan_paniscus
ENSECAG00000010440	-	98	96.186	ENSPPRG00000001638	-	96	96.186	Panthera_pardus
ENSECAG00000010440	-	98	95.339	ENSPPRG00000001651	-	96	95.339	Panthera_pardus
ENSECAG00000010440	-	93	97.758	ENSPTIG00000005711	-	81	97.758	Panthera_tigris_altaica
ENSECAG00000010440	-	98	95.339	ENSPTIG00000007036	-	96	95.339	Panthera_tigris_altaica
ENSECAG00000010440	-	99	93.277	ENSPTRG00000000352	SYF2	98	94.142	Pan_troglodytes
ENSECAG00000010440	-	96	95.633	ENSPANG00000008139	SYF2	99	92.149	Papio_anubis
ENSECAG00000010440	-	100	78.512	ENSPKIG00000008130	syf2	100	78.512	Paramormyrops_kingsleyae
ENSECAG00000010440	-	99	85.062	ENSPSIG00000011816	SYF2	94	85.062	Pelodiscus_sinensis
ENSECAG00000010440	-	94	81.250	ENSPMGG00000008755	syf2	88	81.250	Periophthalmus_magnuspinnatus
ENSECAG00000010440	-	98	93.191	ENSPEMG00000008283	Syf2	96	93.191	Peromyscus_maniculatus_bairdii
ENSECAG00000010440	-	94	93.778	ENSPCIG00000014235	SYF2	92	93.478	Phascolarctos_cinereus
ENSECAG00000010440	-	98	78.298	ENSPFOG00000004116	syf2	95	78.298	Poecilia_formosa
ENSECAG00000010440	-	98	78.298	ENSPLAG00000006691	syf2	99	78.298	Poecilia_latipinna
ENSECAG00000010440	-	98	75.745	ENSPMEG00000011684	syf2	100	75.000	Poecilia_mexicana
ENSECAG00000010440	-	90	81.944	ENSPREG00000003009	syf2	97	77.922	Poecilia_reticulata
ENSECAG00000010440	-	99	93.277	ENSPPYG00000001713	SYF2	99	92.975	Pongo_abelii
ENSECAG00000010440	-	98	64.103	ENSPCOG00000027011	SYF2	96	63.291	Propithecus_coquereli
ENSECAG00000010440	-	98	83.333	ENSPVAG00000005841	SYF2	99	80.992	Pteropus_vampyrus
ENSECAG00000010440	-	92	81.735	ENSPNYG00000004979	syf2	95	79.476	Pundamilia_nyererei
ENSECAG00000010440	-	98	80.591	ENSPNAG00000015570	syf2	99	80.591	Pygocentrus_nattereri
ENSECAG00000010440	-	98	93.617	ENSRNOG00000060597	Syf2	96	93.617	Rattus_norvegicus
ENSECAG00000010440	-	96	93.013	ENSRBIG00000042970	SYF2	99	89.669	Rhinopithecus_bieti
ENSECAG00000010440	-	96	95.633	ENSRROG00000001347	SYF2	99	92.149	Rhinopithecus_roxellana
ENSECAG00000010440	-	94	97.321	ENSSBOG00000020184	SYF2	99	92.975	Saimiri_boliviensis_boliviensis
ENSECAG00000010440	-	86	93.689	ENSSHAG00000007152	-	100	93.689	Sarcophilus_harrisii
ENSECAG00000010440	-	95	92.070	ENSSHAG00000015630	-	96	89.496	Sarcophilus_harrisii
ENSECAG00000010440	-	91	84.862	ENSSFOG00015023647	syf2	92	84.862	Scleropages_formosus
ENSECAG00000010440	-	91	82.569	ENSSMAG00000009867	syf2	92	82.569	Scophthalmus_maximus
ENSECAG00000010440	-	91	83.945	ENSSDUG00000013072	syf2	92	83.945	Seriola_dumerili
ENSECAG00000010440	-	91	83.945	ENSSLDG00000012677	syf2	92	83.945	Seriola_lalandi_dorsalis
ENSECAG00000010440	-	100	72.541	ENSSARG00000012889	SYF2	100	72.541	Sorex_araneus
ENSECAG00000010440	-	97	86.207	ENSSPUG00000005251	SYF2	92	86.207	Sphenodon_punctatus
ENSECAG00000010440	-	92	84.018	ENSSPAG00000009626	syf2	92	84.018	Stegastes_partitus
ENSECAG00000010440	-	98	94.894	ENSSSCG00000037481	SYF2	96	94.894	Sus_scrofa
ENSECAG00000010440	-	62	60.927	ENSTGUG00000001126	SYF2	84	60.947	Taeniopygia_guttata
ENSECAG00000010440	-	96	78.603	ENSTRUG00000001499	syf2	91	78.603	Takifugu_rubripes
ENSECAG00000010440	-	91	80.734	ENSTNIG00000016912	syf2	98	80.734	Tetraodon_nigroviridis
ENSECAG00000010440	-	98	71.368	ENSTBEG00000017370	SYF2	95	70.940	Tupaia_belangeri
ENSECAG00000010440	-	100	94.979	ENSTTRG00000003550	SYF2	98	94.979	Tursiops_truncatus
ENSECAG00000010440	-	98	94.068	ENSUAMG00000002897	SYF2	96	94.068	Ursus_americanus
ENSECAG00000010440	-	98	94.492	ENSUMAG00000013108	SYF2	96	94.492	Ursus_maritimus
ENSECAG00000010440	-	100	93.305	ENSVPAG00000005705	SYF2	98	93.305	Vicugna_pacos
ENSECAG00000010440	-	98	94.068	ENSVVUG00000027175	-	96	94.068	Vulpes_vulpes
ENSECAG00000010440	-	100	89.516	ENSVVUG00000027181	-	100	89.516	Vulpes_vulpes
ENSECAG00000010440	-	98	82.353	ENSXETG00000022797	syf2	96	82.353	Xenopus_tropicalis
ENSECAG00000010440	-	90	81.860	ENSXMAG00000022698	syf2	96	77.155	Xiphophorus_maculatus