EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSECAG00000010659 (Gene tree)
Gene ID: 100057778
Gene Symbol: LSM14B
Alias: -
Full Name: LSM family member 14B
Gene Type: protein_coding
Species: Equus_caballus
Status: putative
Strand: Plus strand
Length: 12496 bases
Position: chr22:49009361-49021856
Accession: 51567
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSECAP00000035118	FDF	PF09532.10	1.1e-24	1	1
ENSECAP00000008685	FDF	PF09532.10	2e-24	1	1
ENSECAP00000025031	FDF	PF09532.10	2.3e-24	1	1
ENSECAP00000008685	SM-ATX	PF14438.6	9.2e-08	1	1
ENSECAP00000025031	SM-ATX	PF14438.6	9.6e-08	1	1
ENSECAP00000008685	LSM14	PF12701.7	1.1e-30	1	1
ENSECAP00000025031	LSM14	PF12701.7	1.2e-30	1	1
ENSECAP00000035118	LSM14	PF12701.7	5e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSECAT00000053058	-	1365	-	ENSECAP00000025031	424 (aa)	XP_023482622	UPI000C9DC24B
ENSECAT00000031871	-	1337	-	ENSECAP00000035118	440 (aa)	-	-
ENSECAT00000011148	-	1194	-	ENSECAP00000008685	385 (aa)	XP_023482624	F6T0J9

Gene Model

Click here to download ENSECAG00000010659's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSECAG00000010659's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSECAG00000010659	LSM14B	91	54.026	ENSECAG00000016281	LSM14A	85	55.191

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSECAG00000010659	LSM14B	100	95.325	ENSG00000149657	LSM14B	100	95.325	Homo_sapiens
ENSECAG00000010659	LSM14B	90	55.801	ENSAPOG00000001780	lsm14b	92	56.131	Acanthochromis_polyacanthus
ENSECAG00000010659	LSM14B	99	95.745	ENSAMEG00000013430	LSM14B	100	95.745	Ailuropoda_melanoleuca
ENSECAG00000010659	LSM14B	90	52.857	ENSACIG00000012266	lsm14b	91	50.959	Amphilophus_citrinellus
ENSECAG00000010659	LSM14B	62	42.798	ENSACIG00000003147	LSM14B	88	42.083	Amphilophus_citrinellus
ENSECAG00000010659	LSM14B	98	49.357	ENSAOCG00000006667	LSM14B	90	49.860	Amphiprion_ocellaris
ENSECAG00000010659	LSM14B	90	56.077	ENSAOCG00000012380	lsm14b	92	56.403	Amphiprion_ocellaris
ENSECAG00000010659	LSM14B	90	52.874	ENSAPEG00000023633	lsm14b	92	51.226	Amphiprion_percula
ENSECAG00000010659	LSM14B	90	53.352	ENSATEG00000016603	lsm14b	92	52.022	Anabas_testudineus
ENSECAG00000010659	LSM14B	71	40.196	ENSATEG00000015895	LSM14B	83	43.431	Anabas_testudineus
ENSECAG00000010659	LSM14B	92	84.439	ENSAPLG00000013203	LSM14B	100	84.439	Anas_platyrhynchos
ENSECAG00000010659	LSM14B	99	81.299	ENSACAG00000016195	LSM14B	99	81.299	Anolis_carolinensis
ENSECAG00000010659	LSM14B	100	93.247	ENSANAG00000037915	LSM14B	100	93.247	Aotus_nancymaae
ENSECAG00000010659	LSM14B	89	50.820	ENSACLG00000019663	lsm14b	92	54.396	Astatotilapia_calliptera
ENSECAG00000010659	LSM14B	99	60.599	ENSAMXG00000002865	lsm14b	99	61.153	Astyanax_mexicanus
ENSECAG00000010659	LSM14B	100	94.575	ENSBTAG00000021558	LSM14B	100	94.575	Bos_taurus
ENSECAG00000010659	LSM14B	100	93.766	ENSCJAG00000014434	LSM14B	100	93.766	Callithrix_jacchus
ENSECAG00000010659	LSM14B	91	95.833	ENSCAFG00000012518	LSM14B	99	95.337	Canis_familiaris
ENSECAG00000010659	LSM14B	100	96.462	ENSCAFG00020022150	LSM14B	100	96.462	Canis_lupus_dingo
ENSECAG00000010659	LSM14B	99	70.000	ENSCHIG00000022681	-	100	70.000	Capra_hircus
ENSECAG00000010659	LSM14B	100	95.991	ENSCHIG00000010284	-	100	95.991	Capra_hircus
ENSECAG00000010659	LSM14B	89	93.275	ENSTSYG00000031914	LSM14B	89	93.275	Carlito_syrichta
ENSECAG00000010659	LSM14B	89	92.711	ENSCAPG00000013059	LSM14B	100	92.711	Cavia_aperea
ENSECAG00000010659	LSM14B	89	92.982	ENSCPOG00000038080	LSM14B	100	92.982	Cavia_porcellus
ENSECAG00000010659	LSM14B	100	68.868	ENSCCAG00000024900	-	99	75.325	Cebus_capucinus
ENSECAG00000010659	LSM14B	100	93.766	ENSCCAG00000021267	LSM14B	100	93.766	Cebus_capucinus
ENSECAG00000010659	LSM14B	100	94.545	ENSCATG00000036006	LSM14B	100	94.545	Cercocebus_atys
ENSECAG00000010659	LSM14B	89	92.982	ENSCLAG00000003186	LSM14B	100	92.982	Chinchilla_lanigera
ENSECAG00000010659	LSM14B	100	94.340	ENSCSAG00000015729	LSM14B	100	94.340	Chlorocebus_sabaeus
ENSECAG00000010659	LSM14B	71	67.881	ENSCHOG00000006997	-	100	64.169	Choloepus_hoffmanni
ENSECAG00000010659	LSM14B	99	86.288	ENSCPBG00000027065	LSM14B	99	86.288	Chrysemys_picta_bellii
ENSECAG00000010659	LSM14B	89	93.567	ENSCANG00000036986	LSM14B	100	93.567	Colobus_angolensis_palliatus
ENSECAG00000010659	LSM14B	100	93.247	ENSCGRG00001018399	Lsm14b	100	93.247	Cricetulus_griseus_chok1gshd
ENSECAG00000010659	LSM14B	63	82.305	ENSCGRG00000002484	-	100	80.658	Cricetulus_griseus_crigri
ENSECAG00000010659	LSM14B	70	91.275	ENSCGRG00000006111	-	100	91.275	Cricetulus_griseus_crigri
ENSECAG00000010659	LSM14B	95	49.231	ENSCSEG00000020669	LSM14B	92	47.826	Cynoglossus_semilaevis
ENSECAG00000010659	LSM14B	91	51.781	ENSCSEG00000004722	lsm14b	93	52.304	Cynoglossus_semilaevis
ENSECAG00000010659	LSM14B	65	37.500	ENSCVAG00000012433	-	88	37.238	Cyprinodon_variegatus
ENSECAG00000010659	LSM14B	99	55.867	ENSDARG00000025386	lsm14b	99	56.378	Danio_rerio
ENSECAG00000010659	LSM14B	72	89.836	ENSDNOG00000025246	LSM14B	100	89.836	Dasypus_novemcinctus
ENSECAG00000010659	LSM14B	90	90.435	ENSDORG00000016683	Lsm14b	100	89.508	Dipodomys_ordii
ENSECAG00000010659	LSM14B	57	85.520	ENSETEG00000011188	-	96	85.520	Echinops_telfairi
ENSECAG00000010659	LSM14B	99	75.584	ENSETEG00000001869	-	100	74.286	Echinops_telfairi
ENSECAG00000010659	LSM14B	72	99.344	ENSEASG00005023218	LSM14B	100	99.344	Equus_asinus_asinus
ENSECAG00000010659	LSM14B	54	97.980	ENSEEUG00000007331	LSM14B	80	97.980	Erinaceus_europaeus
ENSECAG00000010659	LSM14B	90	53.221	ENSELUG00000016299	LSM14B	99	53.964	Esox_lucius
ENSECAG00000010659	LSM14B	96	58.311	ENSELUG00000005780	lsm14b	92	60.606	Esox_lucius
ENSECAG00000010659	LSM14B	100	96.623	ENSFCAG00000003248	LSM14B	100	96.623	Felis_catus
ENSECAG00000010659	LSM14B	91	85.788	ENSFALG00000010618	LSM14B	100	85.788	Ficedula_albicollis
ENSECAG00000010659	LSM14B	89	93.567	ENSFDAG00000002214	LSM14B	100	93.567	Fukomys_damarensis
ENSECAG00000010659	LSM14B	100	50.000	ENSFHEG00000006237	lsm14b	100	50.000	Fundulus_heteroclitus
ENSECAG00000010659	LSM14B	79	42.296	ENSFHEG00000003362	LSM14B	80	44.237	Fundulus_heteroclitus
ENSECAG00000010659	LSM14B	100	52.956	ENSGMOG00000017115	lsm14b	91	51.821	Gadus_morhua
ENSECAG00000010659	LSM14B	99	85.480	ENSGALG00000005125	LSM14B	99	86.417	Gallus_gallus
ENSECAG00000010659	LSM14B	69	69.930	ENSGAFG00000020318	lsm14b	74	69.930	Gambusia_affinis
ENSECAG00000010659	LSM14B	66	41.961	ENSGAFG00000013723	LSM14B	87	38.889	Gambusia_affinis
ENSECAG00000010659	LSM14B	91	54.945	ENSGACG00000009973	lsm14b	92	55.899	Gasterosteus_aculeatus
ENSECAG00000010659	LSM14B	63	80.816	ENSGAGG00000004106	LSM14B	99	77.606	Gopherus_agassizii
ENSECAG00000010659	LSM14B	90	93.391	ENSGGOG00000005630	LSM14B	100	93.443	Gorilla_gorilla
ENSECAG00000010659	LSM14B	100	93.247	ENSHGLG00000015055	LSM14B	100	93.247	Heterocephalus_glaber_female
ENSECAG00000010659	LSM14B	89	90.351	ENSHGLG00100015273	LSM14B	100	91.391	Heterocephalus_glaber_male
ENSECAG00000010659	LSM14B	95	51.451	ENSHCOG00000018747	LSM14B	92	51.944	Hippocampus_comes
ENSECAG00000010659	LSM14B	59	43.913	ENSHCOG00000004867	lsm14b	86	45.106	Hippocampus_comes
ENSECAG00000010659	LSM14B	90	61.190	ENSIPUG00000014946	lsm14b	87	60.615	Ictalurus_punctatus
ENSECAG00000010659	LSM14B	89	93.860	ENSSTOG00000020482	LSM14B	100	93.860	Ictidomys_tridecemlineatus
ENSECAG00000010659	LSM14B	99	92.368	ENSJJAG00000012728	Lsm14b	99	92.368	Jaculus_jaculus
ENSECAG00000010659	LSM14B	52	42.857	ENSKMAG00000012834	-	88	43.333	Kryptolebias_marmoratus
ENSECAG00000010659	LSM14B	90	53.039	ENSKMAG00000017524	lsm14b	93	53.261	Kryptolebias_marmoratus
ENSECAG00000010659	LSM14B	69	40.226	ENSLBEG00000007951	LSM14B	86	40.171	Labrus_bergylta
ENSECAG00000010659	LSM14B	99	71.294	ENSLACG00000003849	LSM14B	99	71.059	Latimeria_chalumnae
ENSECAG00000010659	LSM14B	99	63.846	ENSLOCG00000003746	lsm14b	99	63.846	Lepisosteus_oculatus
ENSECAG00000010659	LSM14B	90	90.173	ENSLAFG00000007492	LSM14B	100	90.173	Loxodonta_africana
ENSECAG00000010659	LSM14B	100	95.065	ENSMFAG00000041479	LSM14B	100	95.065	Macaca_fascicularis
ENSECAG00000010659	LSM14B	100	95.065	ENSMMUG00000014084	LSM14B	100	95.065	Macaca_mulatta
ENSECAG00000010659	LSM14B	100	95.065	ENSMNEG00000045573	LSM14B	100	95.065	Macaca_nemestrina
ENSECAG00000010659	LSM14B	89	93.860	ENSMLEG00000040895	LSM14B	100	93.860	Mandrillus_leucophaeus
ENSECAG00000010659	LSM14B	90	52.603	ENSMAMG00000020539	lsm14b	92	53.514	Mastacembelus_armatus
ENSECAG00000010659	LSM14B	99	50.129	ENSMAMG00000024124	LSM14B	91	50.559	Mastacembelus_armatus
ENSECAG00000010659	LSM14B	91	48.509	ENSMZEG00005026001	LSM14B	94	49.459	Maylandia_zebra
ENSECAG00000010659	LSM14B	89	50.820	ENSMZEG00005000987	lsm14b	92	54.396	Maylandia_zebra
ENSECAG00000010659	LSM14B	91	80.618	ENSMGAG00000005300	LSM14B	100	81.742	Meleagris_gallopavo
ENSECAG00000010659	LSM14B	100	92.727	ENSMAUG00000020700	Lsm14b	100	92.727	Mesocricetus_auratus
ENSECAG00000010659	LSM14B	100	94.286	ENSMICG00000014675	LSM14B	100	94.286	Microcebus_murinus
ENSECAG00000010659	LSM14B	65	76.364	ENSMOCG00000005119	-	93	76.190	Microtus_ochrogaster
ENSECAG00000010659	LSM14B	100	92.208	ENSMOCG00000020600	Lsm14b	100	92.208	Microtus_ochrogaster
ENSECAG00000010659	LSM14B	91	51.282	ENSMMOG00000017321	LSM14B	91	51.282	Mola_mola
ENSECAG00000010659	LSM14B	90	53.652	ENSMMOG00000020042	lsm14b	95	54.017	Mola_mola
ENSECAG00000010659	LSM14B	72	86.885	ENSMODG00000016690	LSM14B	100	86.885	Monodelphis_domestica
ENSECAG00000010659	LSM14B	92	49.454	ENSMALG00000022251	LSM14B	92	49.036	Monopterus_albus
ENSECAG00000010659	LSM14B	94	53.571	ENSMALG00000004783	lsm14b	92	53.125	Monopterus_albus
ENSECAG00000010659	LSM14B	100	92.217	MGP_CAROLIEiJ_G0024770	Lsm14b	100	92.217	Mus_caroli
ENSECAG00000010659	LSM14B	100	92.468	ENSMUSG00000039108	Lsm14b	100	92.468	Mus_musculus
ENSECAG00000010659	LSM14B	100	92.987	MGP_PahariEiJ_G0026214	Lsm14b	100	92.987	Mus_pahari
ENSECAG00000010659	LSM14B	100	92.468	MGP_SPRETEiJ_G0025693	Lsm14b	100	92.468	Mus_spretus
ENSECAG00000010659	LSM14B	95	91.067	ENSMPUG00000007584	LSM14B	100	90.819	Mustela_putorius_furo
ENSECAG00000010659	LSM14B	100	95.337	ENSMLUG00000000304	LSM14B	100	95.078	Myotis_lucifugus
ENSECAG00000010659	LSM14B	60	90.043	ENSNGAG00000016550	Lsm14b	100	90.043	Nannospalax_galili
ENSECAG00000010659	LSM14B	89	93.860	ENSNLEG00000015757	LSM14B	100	93.860	Nomascus_leucogenys
ENSECAG00000010659	LSM14B	77	97.887	ENSMEUG00000008267	-	77	97.945	Notamacropus_eugenii
ENSECAG00000010659	LSM14B	63	58.264	ENSMEUG00000006305	-	85	84.971	Notamacropus_eugenii
ENSECAG00000010659	LSM14B	50	95.000	ENSOPRG00000000447	-	59	95.000	Ochotona_princeps
ENSECAG00000010659	LSM14B	100	94.026	ENSODEG00000004099	LSM14B	100	94.026	Octodon_degus
ENSECAG00000010659	LSM14B	89	56.022	ENSONIG00000020318	lsm14b	92	56.593	Oreochromis_niloticus
ENSECAG00000010659	LSM14B	72	82.734	ENSOANG00000003370	LSM14B	99	82.623	Ornithorhynchus_anatinus
ENSECAG00000010659	LSM14B	89	89.244	ENSOCUG00000006279	LSM14B	100	89.244	Oryctolagus_cuniculus
ENSECAG00000010659	LSM14B	90	52.925	ENSORLG00000013525	lsm14b	92	53.297	Oryzias_latipes
ENSECAG00000010659	LSM14B	92	45.576	ENSORLG00000028353	LSM14B	91	45.682	Oryzias_latipes
ENSECAG00000010659	LSM14B	90	51.247	ENSORLG00020020553	lsm14b	92	51.639	Oryzias_latipes_hni
ENSECAG00000010659	LSM14B	66	34.532	ENSORLG00020018191	-	85	34.118	Oryzias_latipes_hni
ENSECAG00000010659	LSM14B	90	51.247	ENSORLG00015016862	lsm14b	92	51.639	Oryzias_latipes_hsok
ENSECAG00000010659	LSM14B	92	46.237	ENSORLG00015013157	LSM14B	91	45.455	Oryzias_latipes_hsok
ENSECAG00000010659	LSM14B	90	49.046	ENSOMEG00000023917	lsm14b	92	51.613	Oryzias_melastigma
ENSECAG00000010659	LSM14B	64	40.081	ENSOMEG00000000171	-	97	39.922	Oryzias_melastigma
ENSECAG00000010659	LSM14B	100	93.868	ENSOGAG00000003915	LSM14B	100	93.868	Otolemur_garnettii
ENSECAG00000010659	LSM14B	92	93.830	ENSOARG00000014706	LSM14B	99	94.560	Ovis_aries
ENSECAG00000010659	LSM14B	90	93.391	ENSPPAG00000035799	LSM14B	95	93.391	Pan_paniscus
ENSECAG00000010659	LSM14B	100	96.364	ENSPPRG00000009197	LSM14B	100	96.364	Panthera_pardus
ENSECAG00000010659	LSM14B	70	94.595	ENSPTIG00000021518	LSM14B	100	94.595	Panthera_tigris_altaica
ENSECAG00000010659	LSM14B	100	95.325	ENSPTRG00000013696	LSM14B	100	95.325	Pan_troglodytes
ENSECAG00000010659	LSM14B	100	94.805	ENSPANG00000011747	LSM14B	100	94.805	Papio_anubis
ENSECAG00000010659	LSM14B	99	62.141	ENSPKIG00000003275	lsm14b	87	87.234	Paramormyrops_kingsleyae
ENSECAG00000010659	LSM14B	90	84.438	ENSPSIG00000014762	LSM14B	100	84.438	Pelodiscus_sinensis
ENSECAG00000010659	LSM14B	99	93.176	ENSPEMG00000017688	Lsm14b	100	93.176	Peromyscus_maniculatus_bairdii
ENSECAG00000010659	LSM14B	100	89.610	ENSPCIG00000013405	LSM14B	100	89.610	Phascolarctos_cinereus
ENSECAG00000010659	LSM14B	100	51.134	ENSPFOG00000005631	lsm14b	92	51.233	Poecilia_formosa
ENSECAG00000010659	LSM14B	90	47.458	ENSPLAG00000005793	LSM14B	91	47.486	Poecilia_latipinna
ENSECAG00000010659	LSM14B	100	51.139	ENSPLAG00000002449	lsm14b	92	51.240	Poecilia_latipinna
ENSECAG00000010659	LSM14B	100	50.633	ENSPMEG00000000745	lsm14b	92	50.689	Poecilia_mexicana
ENSECAG00000010659	LSM14B	89	47.143	ENSPMEG00000022953	LSM14B	91	46.779	Poecilia_mexicana
ENSECAG00000010659	LSM14B	65	37.319	ENSPREG00000007828	LSM14B	87	39.442	Poecilia_reticulata
ENSECAG00000010659	LSM14B	100	78.638	ENSPPYG00000011194	LSM14B	100	77.230	Pongo_abelii
ENSECAG00000010659	LSM14B	100	94.545	ENSPCOG00000013625	LSM14B	100	94.545	Propithecus_coquereli
ENSECAG00000010659	LSM14B	82	74.928	ENSPVAG00000017918	LSM14B	100	73.312	Pteropus_vampyrus
ENSECAG00000010659	LSM14B	99	62.148	ENSPNAG00000012777	lsm14b	99	61.893	Pygocentrus_nattereri
ENSECAG00000010659	LSM14B	100	92.453	ENSRNOG00000054557	Lsm14b	100	92.453	Rattus_norvegicus
ENSECAG00000010659	LSM14B	90	92.932	ENSRBIG00000033461	LSM14B	99	93.294	Rhinopithecus_bieti
ENSECAG00000010659	LSM14B	91	93.983	ENSRROG00000042949	LSM14B	100	92.459	Rhinopithecus_roxellana
ENSECAG00000010659	LSM14B	89	92.690	ENSSBOG00000032820	LSM14B	100	92.690	Saimiri_boliviensis_boliviensis
ENSECAG00000010659	LSM14B	90	88.116	ENSSHAG00000015528	LSM14B	100	86.557	Sarcophilus_harrisii
ENSECAG00000010659	LSM14B	90	61.064	ENSSFOG00015004627	lsm14b	92	62.222	Scleropages_formosus
ENSECAG00000010659	LSM14B	97	52.865	ENSSMAG00000000135	LSM14B	92	52.877	Scophthalmus_maximus
ENSECAG00000010659	LSM14B	90	55.525	ENSSMAG00000012725	lsm14b	92	55.556	Scophthalmus_maximus
ENSECAG00000010659	LSM14B	92	54.521	ENSSDUG00000022770	LSM14B	92	53.994	Seriola_dumerili
ENSECAG00000010659	LSM14B	90	54.795	ENSSDUG00000020977	lsm14b	92	54.987	Seriola_dumerili
ENSECAG00000010659	LSM14B	62	41.860	ENSSLDG00000011354	-	89	44.706	Seriola_lalandi_dorsalis
ENSECAG00000010659	LSM14B	53	84.541	ENSSARG00000007749	-	100	84.541	Sorex_araneus
ENSECAG00000010659	LSM14B	99	85.613	ENSSPUG00000014360	LSM14B	99	85.613	Sphenodon_punctatus
ENSECAG00000010659	LSM14B	65	40.741	ENSSPAG00000018854	-	88	39.370	Stegastes_partitus
ENSECAG00000010659	LSM14B	90	55.714	ENSSPAG00000020915	lsm14b	92	54.648	Stegastes_partitus
ENSECAG00000010659	LSM14B	100	93.247	ENSSSCG00000026052	LSM14B	100	90.820	Sus_scrofa
ENSECAG00000010659	LSM14B	90	84.483	ENSTGUG00000007884	LSM14B	100	84.483	Taeniopygia_guttata
ENSECAG00000010659	LSM14B	100	51.724	ENSTRUG00000011354	lsm14b	100	46.517	Takifugu_rubripes
ENSECAG00000010659	LSM14B	92	49.731	ENSTRUG00000001529	LSM14B	92	49.589	Takifugu_rubripes
ENSECAG00000010659	LSM14B	92	54.722	ENSTNIG00000002445	lsm14b	92	54.496	Tetraodon_nigroviridis
ENSECAG00000010659	LSM14B	85	100.000	ENSTTRG00000011043	LSM14B	83	100.000	Tursiops_truncatus
ENSECAG00000010659	LSM14B	98	90.865	ENSUAMG00000025298	LSM14B	99	90.865	Ursus_americanus
ENSECAG00000010659	LSM14B	98	90.865	ENSUMAG00000000480	LSM14B	99	90.865	Ursus_maritimus
ENSECAG00000010659	LSM14B	90	95.072	ENSVVUG00000015920	LSM14B	100	94.754	Vulpes_vulpes
ENSECAG00000010659	LSM14B	84	76.147	ENSXETG00000001997	lsm14b	99	77.064	Xenopus_tropicalis
ENSECAG00000010659	LSM14B	90	48.901	ENSXMAG00000010013	lsm14b	92	49.322	Xiphophorus_maculatus