EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSECAG00000010878 (Gene tree)
Gene ID: 100057443
Gene Symbol: ZNF408
Alias: -
Full Name: zinc finger protein 408
Gene Type: protein_coding
Species: Equus_caballus
Status: putative
Strand: Plus strand
Length: 4888 bases
Position: chr12:11304065-11308952
Accession: 25318
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSECAP00000043461	zf-C2H2	PF00096.26	3e-40	1	8
ENSECAP00000043461	zf-C2H2	PF00096.26	3e-40	2	8
ENSECAP00000043461	zf-C2H2	PF00096.26	3e-40	3	8
ENSECAP00000043461	zf-C2H2	PF00096.26	3e-40	4	8
ENSECAP00000043461	zf-C2H2	PF00096.26	3e-40	5	8
ENSECAP00000043461	zf-C2H2	PF00096.26	3e-40	6	8
ENSECAP00000043461	zf-C2H2	PF00096.26	3e-40	7	8
ENSECAP00000043461	zf-C2H2	PF00096.26	3e-40	8	8
ENSECAP00000008742	zf-C2H2	PF00096.26	6.3e-40	1	8
ENSECAP00000008742	zf-C2H2	PF00096.26	6.3e-40	2	8
ENSECAP00000008742	zf-C2H2	PF00096.26	6.3e-40	3	8
ENSECAP00000008742	zf-C2H2	PF00096.26	6.3e-40	4	8
ENSECAP00000008742	zf-C2H2	PF00096.26	6.3e-40	5	8
ENSECAP00000008742	zf-C2H2	PF00096.26	6.3e-40	6	8
ENSECAP00000008742	zf-C2H2	PF00096.26	6.3e-40	7	8
ENSECAP00000008742	zf-C2H2	PF00096.26	6.3e-40	8	8
ENSECAP00000043461	zf-met	PF12874.7	2e-11	1	1
ENSECAP00000008742	zf-met	PF12874.7	3.1e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSECAT00000034570	-	2037	-	ENSECAP00000043461	678 (aa)	XP_023509747	UPI0004BE02DC
ENSECAT00000011211	-	2175	-	ENSECAP00000008742	724 (aa)	XP_001490832	F7DQF6

Gene Model

Click here to download ENSECAG00000010878's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSECAG00000010878's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSECAG00000010878	ZNF408	55	35.664	ENSECAG00000005459	ZNF236	68	39.474
ENSECAG00000010878	ZNF408	52	38.683	ENSECAG00000032997	-	98	38.683
ENSECAG00000010878	ZNF408	51	34.673	ENSECAG00000009858	ZBTB41	52	34.673
ENSECAG00000010878	ZNF408	53	37.445	ENSECAG00000005773	ZNF574	69	39.062
ENSECAG00000010878	ZNF408	53	37.050	ENSECAG00000011892	ZNF582	71	37.050

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSECAG00000010878	ZNF408	98	79.774	ENSG00000175213	ZNF408	100	78.788	Homo_sapiens
ENSECAG00000010878	ZNF408	100	80.966	ENSAMEG00000006904	ZNF408	100	80.966	Ailuropoda_melanoleuca
ENSECAG00000010878	ZNF408	98	73.603	ENSANAG00000036294	ZNF408	93	82.010	Aotus_nancymaae
ENSECAG00000010878	ZNF408	93	37.741	ENSAMXG00000032642	znf408	97	37.624	Astyanax_mexicanus
ENSECAG00000010878	ZNF408	98	80.478	ENSCJAG00000019859	ZNF408	100	80.028	Callithrix_jacchus
ENSECAG00000010878	ZNF408	100	81.756	ENSCAFG00000009143	ZNF408	97	81.893	Canis_familiaris
ENSECAG00000010878	ZNF408	100	81.619	ENSCAFG00020019155	ZNF408	97	81.756	Canis_lupus_dingo
ENSECAG00000010878	ZNF408	84	78.109	ENSCHIG00000025346	ZNF408	97	78.859	Capra_hircus
ENSECAG00000010878	ZNF408	100	75.552	ENSTSYG00000025443	ZNF408	100	76.519	Carlito_syrichta
ENSECAG00000010878	ZNF408	98	79.267	ENSCCAG00000029472	ZNF408	100	78.375	Cebus_capucinus
ENSECAG00000010878	ZNF408	58	94.158	ENSCHOG00000009909	ZNF408	75	94.158	Choloepus_hoffmanni
ENSECAG00000010878	ZNF408	100	69.421	ENSCGRG00001023588	Zfp408	100	69.421	Cricetulus_griseus_chok1gshd
ENSECAG00000010878	ZNF408	100	69.421	ENSCGRG00000017618	Zfp408	100	69.421	Cricetulus_griseus_crigri
ENSECAG00000010878	ZNF408	100	75.862	ENSDNOG00000047669	ZNF408	100	75.862	Dasypus_novemcinctus
ENSECAG00000010878	ZNF408	99	67.688	ENSDORG00000000387	Zfp408	99	67.549	Dipodomys_ordii
ENSECAG00000010878	ZNF408	86	65.314	ENSETEG00000017621	-	100	64.510	Echinops_telfairi
ENSECAG00000010878	ZNF408	100	98.895	ENSEASG00005015461	ZNF408	100	98.895	Equus_asinus_asinus
ENSECAG00000010878	ZNF408	94	69.781	ENSEEUG00000010466	ZNF408	94	69.781	Erinaceus_europaeus
ENSECAG00000010878	ZNF408	100	82.207	ENSFCAG00000029105	ZNF408	100	82.207	Felis_catus
ENSECAG00000010878	ZNF408	55	45.346	ENSGAFG00000018557	-	59	45.346	Gambusia_affinis
ENSECAG00000010878	ZNF408	98	79.915	ENSGGOG00000010152	ZNF408	100	78.926	Gorilla_gorilla
ENSECAG00000010878	ZNF408	90	76.823	ENSLAFG00000027848	ZNF408	100	80.738	Loxodonta_africana
ENSECAG00000010878	ZNF408	98	81.805	ENSMICG00000045320	ZNF408	100	81.103	Microcebus_murinus
ENSECAG00000010878	ZNF408	72	53.807	ENSMODG00000019895	-	83	54.198	Monodelphis_domestica
ENSECAG00000010878	ZNF408	97	82.764	ENSMPUG00000005490	ZNF408	100	81.103	Mustela_putorius_furo
ENSECAG00000010878	ZNF408	99	68.785	ENSNGAG00000000309	Zfp408	99	68.923	Nannospalax_galili
ENSECAG00000010878	ZNF408	100	77.961	ENSNLEG00000014132	ZNF408	100	77.961	Nomascus_leucogenys
ENSECAG00000010878	ZNF408	94	64.526	ENSOPRG00000009225	ZNF408	95	64.526	Ochotona_princeps
ENSECAG00000010878	ZNF408	100	74.828	ENSOCUG00000010953	ZNF408	100	74.828	Oryctolagus_cuniculus
ENSECAG00000010878	ZNF408	86	82.665	ENSOGAG00000034080	ZNF408	100	82.022	Otolemur_garnettii
ENSECAG00000010878	ZNF408	98	79.915	ENSPPAG00000034993	ZNF408	100	78.926	Pan_paniscus
ENSECAG00000010878	ZNF408	100	82.483	ENSPPRG00000016866	ZNF408	100	82.483	Panthera_pardus
ENSECAG00000010878	ZNF408	100	82.897	ENSPTIG00000015467	ZNF408	100	82.897	Panthera_tigris_altaica
ENSECAG00000010878	ZNF408	98	79.774	ENSPTRG00000003551	ZNF408	100	78.788	Pan_troglodytes
ENSECAG00000010878	ZNF408	77	72.114	ENSPEMG00000016757	Zfp408	99	72.114	Peromyscus_maniculatus_bairdii
ENSECAG00000010878	ZNF408	55	47.815	ENSPFOG00000001760	-	92	47.815	Poecilia_formosa
ENSECAG00000010878	ZNF408	55	49.344	ENSPMEG00000021147	-	72	49.344	Poecilia_mexicana
ENSECAG00000010878	ZNF408	54	46.341	ENSPREG00000017068	-	58	46.341	Poecilia_reticulata
ENSECAG00000010878	ZNF408	98	78.359	ENSPPYG00000003318	ZNF408	99	79.538	Pongo_abelii
ENSECAG00000010878	ZNF408	100	74.897	ENSPCAG00000014001	ZNF408	100	75.310	Procavia_capensis
ENSECAG00000010878	ZNF408	98	82.817	ENSPCOG00000028698	ZNF408	100	82.094	Propithecus_coquereli
ENSECAG00000010878	ZNF408	100	82.897	ENSPVAG00000015791	ZNF408	100	82.897	Pteropus_vampyrus
ENSECAG00000010878	ZNF408	98	78.138	ENSSBOG00000033023	ZNF408	100	78.099	Saimiri_boliviensis_boliviensis
ENSECAG00000010878	ZNF408	100	82.069	ENSSSCG00000023097	ZNF408	97	82.069	Sus_scrofa
ENSECAG00000010878	ZNF408	75	88.803	ENSTBEG00000004260	ZNF408	83	88.803	Tupaia_belangeri
ENSECAG00000010878	ZNF408	100	81.931	ENSUAMG00000026154	ZNF408	100	81.931	Ursus_americanus
ENSECAG00000010878	ZNF408	100	81.931	ENSUMAG00000014405	ZNF408	100	81.931	Ursus_maritimus
ENSECAG00000010878	ZNF408	100	81.481	ENSVVUG00000026805	ZNF408	97	80.796	Vulpes_vulpes
ENSECAG00000010878	ZNF408	55	55.409	ENSXETG00000001980	znf408	100	55.409	Xenopus_tropicalis
ENSECAG00000010878	ZNF408	54	49.596	ENSXCOG00000002869	-	73	48.930	Xiphophorus_couchianus
ENSECAG00000010878	ZNF408	54	49.326	ENSXMAG00000018347	-	70	49.326	Xiphophorus_maculatus