EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSECAG00000011405 (Gene tree)
Gene ID: 100053387
Gene Symbol: BLM
Alias: -
Full Name: BLM RecQ like helicase
Gene Type: protein_coding
Species: Equus_caballus
Status: putative
Strand: Plus strand
Length: 61659 bases
Position: chr1:93793425-93855083
Accession: 57212
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSECAP00000009382	HRDC	PF00570.23	2.5e-11	1	1
ENSECAP00000026467	HRDC	PF00570.23	2.5e-11	1	1
ENSECAP00000026467	BDHCT	PF08072.11	3e-22	1	1
ENSECAP00000009382	BDHCT	PF08072.11	3.2e-22	1	1
ENSECAP00000009382	DEAD	PF00270.29	2e-19	1	1
ENSECAP00000026467	DEAD	PF00270.29	2.9e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSECAT00000033444	-	4156	-	ENSECAP00000026467	1383 (aa)	-	-
ENSECAT00000011946	-	4423	XM_023649579	ENSECAP00000009382	1421 (aa)	XP_023505347	F6ZL78

Gene Model

Click here to download ENSECAG00000011405's gene model file

Pathways

Pathway ID	Pathway Name	Source
ecb03440	Homologous recombination	KEGG
ecb03460	Fanconi anemia pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSECAG00000011405's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSECAG00000011405	BLM	100	83.997	ENSG00000197299	BLM	100	84.696	Homo_sapiens
ENSECAG00000011405	BLM	59	62.012	ENSAPOG00000017966	blm	62	62.130	Acanthochromis_polyacanthus
ENSECAG00000011405	BLM	100	84.416	ENSAMEG00000013843	BLM	100	84.416	Ailuropoda_melanoleuca
ENSECAG00000011405	BLM	67	58.837	ENSACIG00000023762	blm	68	58.452	Amphilophus_citrinellus
ENSECAG00000011405	BLM	59	62.028	ENSAOCG00000003318	blm	60	62.456	Amphiprion_ocellaris
ENSECAG00000011405	BLM	59	62.264	ENSAPEG00000018105	blm	79	52.110	Amphiprion_percula
ENSECAG00000011405	BLM	83	62.468	ENSATEG00000006421	blm	56	66.327	Anabas_testudineus
ENSECAG00000011405	BLM	82	58.134	ENSAPLG00000006878	BLM	97	58.312	Anas_platyrhynchos
ENSECAG00000011405	BLM	81	58.264	ENSACAG00000014275	BLM	85	71.483	Anolis_carolinensis
ENSECAG00000011405	BLM	100	83.427	ENSANAG00000038415	BLM	100	83.392	Aotus_nancymaae
ENSECAG00000011405	BLM	87	63.183	ENSACLG00000020354	blm	85	62.694	Astatotilapia_calliptera
ENSECAG00000011405	BLM	99	45.642	ENSAMXG00000016970	blm	59	62.297	Astyanax_mexicanus
ENSECAG00000011405	BLM	93	84.539	ENSBTAG00000020301	BLM	100	84.539	Bos_taurus
ENSECAG00000011405	BLM	100	83.077	ENSCJAG00000009803	BLM	100	83.089	Callithrix_jacchus
ENSECAG00000011405	BLM	100	85.524	ENSCAFG00000012385	BLM	100	85.175	Canis_familiaris
ENSECAG00000011405	BLM	100	85.524	ENSCAFG00020016111	BLM	94	94.005	Canis_lupus_dingo
ENSECAG00000011405	BLM	100	83.636	ENSCHIG00000010329	BLM	100	84.211	Capra_hircus
ENSECAG00000011405	BLM	100	83.240	ENSTSYG00000012368	BLM	100	83.240	Carlito_syrichta
ENSECAG00000011405	BLM	85	85.549	ENSCAPG00000017976	BLM	99	85.549	Cavia_aperea
ENSECAG00000011405	BLM	100	76.869	ENSCPOG00000001761	BLM	100	76.590	Cavia_porcellus
ENSECAG00000011405	BLM	100	82.353	ENSCCAG00000023069	BLM	100	82.394	Cebus_capucinus
ENSECAG00000011405	BLM	100	83.368	ENSCATG00000040609	BLM	92	95.148	Cercocebus_atys
ENSECAG00000011405	BLM	100	78.656	ENSCLAG00000012111	BLM	100	78.656	Chinchilla_lanigera
ENSECAG00000011405	BLM	100	82.835	ENSCSAG00000017040	BLM	100	83.183	Chlorocebus_sabaeus
ENSECAG00000011405	BLM	91	77.053	ENSCHOG00000006255	BLM	93	78.737	Choloepus_hoffmanni
ENSECAG00000011405	BLM	89	55.896	ENSCPBG00000025000	BLM	95	73.669	Chrysemys_picta_bellii
ENSECAG00000011405	BLM	84	93.889	ENSCANG00000034808	BLM	100	93.889	Colobus_angolensis_palliatus
ENSECAG00000011405	BLM	100	78.188	ENSCGRG00001024897	Blm	100	78.746	Cricetulus_griseus_chok1gshd
ENSECAG00000011405	BLM	68	74.588	ENSCGRG00000016261	Blm	97	75.000	Cricetulus_griseus_crigri
ENSECAG00000011405	BLM	58	62.635	ENSCSEG00000013483	blm	64	62.545	Cynoglossus_semilaevis
ENSECAG00000011405	BLM	99	46.796	ENSDARG00000077089	blm	56	65.360	Danio_rerio
ENSECAG00000011405	BLM	99	81.590	ENSDNOG00000010159	BLM	99	81.799	Dasypus_novemcinctus
ENSECAG00000011405	BLM	74	80.889	ENSDORG00000011033	Blm	100	80.795	Dipodomys_ordii
ENSECAG00000011405	BLM	82	85.833	ENSETEG00000015019	BLM	81	85.833	Echinops_telfairi
ENSECAG00000011405	BLM	100	96.974	ENSEASG00005006727	BLM	100	100.000	Equus_asinus_asinus
ENSECAG00000011405	BLM	98	76.868	ENSEEUG00000001434	BLM	98	76.868	Erinaceus_europaeus
ENSECAG00000011405	BLM	55	66.413	ENSELUG00000019098	blm	51	69.136	Esox_lucius
ENSECAG00000011405	BLM	100	82.879	ENSFCAG00000006087	BLM	100	82.669	Felis_catus
ENSECAG00000011405	BLM	80	55.979	ENSFALG00000010981	BLM	90	55.632	Ficedula_albicollis
ENSECAG00000011405	BLM	100	70.701	ENSFDAG00000012658	BLM	100	70.701	Fukomys_damarensis
ENSECAG00000011405	BLM	60	60.950	ENSFHEG00000002553	blm	60	61.967	Fundulus_heteroclitus
ENSECAG00000011405	BLM	83	62.628	ENSGMOG00000016431	blm	89	61.232	Gadus_morhua
ENSECAG00000011405	BLM	99	50.984	ENSGALG00000008256	BLM	99	50.780	Gallus_gallus
ENSECAG00000011405	BLM	55	64.827	ENSGAFG00000001117	blm	59	64.744	Gambusia_affinis
ENSECAG00000011405	BLM	61	64.541	ENSGACG00000010863	blm	100	73.157	Gasterosteus_aculeatus
ENSECAG00000011405	BLM	88	52.742	ENSGAGG00000005383	BLM	90	78.125	Gopherus_agassizii
ENSECAG00000011405	BLM	100	83.788	ENSGGOG00000007710	BLM	92	95.687	Gorilla_gorilla
ENSECAG00000011405	BLM	87	63.302	ENSHBUG00000015943	blm	87	62.827	Haplochromis_burtoni
ENSECAG00000011405	BLM	100	79.484	ENSHGLG00000013231	BLM	99	79.065	Heterocephalus_glaber_female
ENSECAG00000011405	BLM	74	54.830	ENSHCOG00000011455	blm	83	61.137	Hippocampus_comes
ENSECAG00000011405	BLM	74	54.202	ENSIPUG00000000529	blm	71	62.278	Ictalurus_punctatus
ENSECAG00000011405	BLM	100	80.976	ENSSTOG00000005000	BLM	100	81.254	Ictidomys_tridecemlineatus
ENSECAG00000011405	BLM	66	85.426	ENSJJAG00000016322	Blm	94	86.512	Jaculus_jaculus
ENSECAG00000011405	BLM	71	57.336	ENSKMAG00000016608	blm	65	59.242	Kryptolebias_marmoratus
ENSECAG00000011405	BLM	59	66.978	ENSLACG00000006490	BLM	99	50.267	Latimeria_chalumnae
ENSECAG00000011405	BLM	87	62.854	ENSLOCG00000014302	blm	70	62.959	Lepisosteus_oculatus
ENSECAG00000011405	BLM	100	83.438	ENSMFAG00000042982	BLM	92	95.418	Macaca_fascicularis
ENSECAG00000011405	BLM	100	83.508	ENSMMUG00000019526	BLM	92	95.418	Macaca_mulatta
ENSECAG00000011405	BLM	99	79.661	ENSMNEG00000031251	BLM	92	95.148	Macaca_nemestrina
ENSECAG00000011405	BLM	100	80.992	ENSMLEG00000032934	BLM	100	81.691	Mandrillus_leucophaeus
ENSECAG00000011405	BLM	88	59.538	ENSMAMG00000008726	blm	61	60.187	Mastacembelus_armatus
ENSECAG00000011405	BLM	87	62.915	ENSMZEG00005022323	blm	87	62.738	Maylandia_zebra
ENSECAG00000011405	BLM	100	78.010	ENSMAUG00000008953	Blm	99	78.358	Mesocricetus_auratus
ENSECAG00000011405	BLM	100	82.973	ENSMICG00000034442	BLM	100	83.810	Microcebus_murinus
ENSECAG00000011405	BLM	100	76.274	ENSMOCG00000016367	Blm	99	76.430	Microtus_ochrogaster
ENSECAG00000011405	BLM	80	52.286	ENSMMOG00000006959	blm	60	61.865	Mola_mola
ENSECAG00000011405	BLM	99	65.529	ENSMODG00000019449	BLM	99	65.232	Monodelphis_domestica
ENSECAG00000011405	BLM	62	63.636	ENSMALG00000007323	blm	63	63.282	Monopterus_albus
ENSECAG00000011405	BLM	100	74.722	MGP_CAROLIEiJ_G0029907	Blm	100	74.653	Mus_caroli
ENSECAG00000011405	BLM	100	74.914	ENSMUSG00000030528	Blm	100	74.775	Mus_musculus
ENSECAG00000011405	BLM	100	75.678	MGP_PahariEiJ_G0013129	Blm	100	75.539	Mus_pahari
ENSECAG00000011405	BLM	100	75.417	MGP_SPRETEiJ_G0031009	Blm	100	75.069	Mus_spretus
ENSECAG00000011405	BLM	85	84.202	ENSMPUG00000015657	BLM	99	83.954	Mustela_putorius_furo
ENSECAG00000011405	BLM	100	81.729	ENSMLUG00000014697	BLM	100	82.218	Myotis_lucifugus
ENSECAG00000011405	BLM	100	79.414	ENSNGAG00000001275	Blm	100	79.135	Nannospalax_galili
ENSECAG00000011405	BLM	87	62.945	ENSNBRG00000019702	blm	87	62.724	Neolamprologus_brichardi
ENSECAG00000011405	BLM	100	82.390	ENSNLEG00000012087	BLM	100	84.484	Nomascus_leucogenys
ENSECAG00000011405	BLM	99	61.107	ENSMEUG00000007253	BLM	99	60.692	Notamacropus_eugenii
ENSECAG00000011405	BLM	95	86.704	ENSOPRG00000011667	BLM	95	86.427	Ochotona_princeps
ENSECAG00000011405	BLM	74	77.630	ENSODEG00000015373	BLM	100	77.630	Octodon_degus
ENSECAG00000011405	BLM	59	63.046	ENSONIG00000015193	blm	59	63.046	Oreochromis_niloticus
ENSECAG00000011405	BLM	53	82.812	ENSOANG00000009316	-	99	82.445	Ornithorhynchus_anatinus
ENSECAG00000011405	BLM	99	75.192	ENSOCUG00000013969	BLM	99	75.035	Oryctolagus_cuniculus
ENSECAG00000011405	BLM	67	63.409	ENSORLG00000008110	blm	68	63.409	Oryzias_latipes
ENSECAG00000011405	BLM	67	63.302	ENSORLG00020004812	blm	68	63.409	Oryzias_latipes_hni
ENSECAG00000011405	BLM	67	63.701	ENSORLG00015018640	blm	78	66.453	Oryzias_latipes_hsok
ENSECAG00000011405	BLM	68	59.807	ENSOMEG00000023545	blm	67	59.832	Oryzias_melastigma
ENSECAG00000011405	BLM	100	77.530	ENSOGAG00000005708	BLM	100	77.530	Otolemur_garnettii
ENSECAG00000011405	BLM	100	83.636	ENSOARG00000012875	BLM	100	83.566	Ovis_aries
ENSECAG00000011405	BLM	100	83.718	ENSPPAG00000032173	BLM	100	84.556	Pan_paniscus
ENSECAG00000011405	BLM	100	82.809	ENSPPRG00000002471	BLM	100	82.600	Panthera_pardus
ENSECAG00000011405	BLM	100	82.949	ENSPTIG00000016168	BLM	100	82.739	Panthera_tigris_altaica
ENSECAG00000011405	BLM	100	83.578	ENSPTRG00000007460	BLM	100	84.416	Pan_troglodytes
ENSECAG00000011405	BLM	100	83.508	ENSPANG00000018572	BLM	92	95.418	Papio_anubis
ENSECAG00000011405	BLM	87	63.475	ENSPKIG00000008954	blm	73	63.550	Paramormyrops_kingsleyae
ENSECAG00000011405	BLM	51	67.639	ENSPMGG00000006629	blm	79	67.316	Periophthalmus_magnuspinnatus
ENSECAG00000011405	BLM	100	76.864	ENSPEMG00000017348	Blm	100	76.725	Peromyscus_maniculatus_bairdii
ENSECAG00000011405	BLM	50	58.462	ENSPMAG00000000445	blm	96	58.741	Petromyzon_marinus
ENSECAG00000011405	BLM	99	64.393	ENSPCIG00000006609	BLM	99	63.959	Phascolarctos_cinereus
ENSECAG00000011405	BLM	63	62.094	ENSPFOG00000005059	blm	63	62.335	Poecilia_formosa
ENSECAG00000011405	BLM	58	62.244	ENSPLAG00000017344	blm	56	64.668	Poecilia_latipinna
ENSECAG00000011405	BLM	55	65.039	ENSPMEG00000000321	blm	56	64.413	Poecilia_mexicana
ENSECAG00000011405	BLM	55	64.524	ENSPREG00000007715	blm	56	64.570	Poecilia_reticulata
ENSECAG00000011405	BLM	100	81.761	ENSPPYG00000006784	BLM	100	82.390	Pongo_abelii
ENSECAG00000011405	BLM	73	90.909	ENSPCAG00000008960	BLM	72	90.909	Procavia_capensis
ENSECAG00000011405	BLM	100	77.390	ENSPCOG00000000439	BLM	100	78.443	Propithecus_coquereli
ENSECAG00000011405	BLM	81	95.527	ENSPVAG00000011642	BLM	88	95.527	Pteropus_vampyrus
ENSECAG00000011405	BLM	58	55.417	ENSPNYG00000010956	blm	57	55.362	Pundamilia_nyererei
ENSECAG00000011405	BLM	58	65.274	ENSPNAG00000011714	blm	67	64.403	Pygocentrus_nattereri
ENSECAG00000011405	BLM	100	74.477	ENSRNOG00000011213	Blm	100	74.198	Rattus_norvegicus
ENSECAG00000011405	BLM	100	80.992	ENSRBIG00000029656	BLM	100	86.730	Rhinopithecus_bieti
ENSECAG00000011405	BLM	100	82.669	ENSRROG00000037871	BLM	92	93.801	Rhinopithecus_roxellana
ENSECAG00000011405	BLM	91	83.128	ENSSBOG00000030957	BLM	100	83.128	Saimiri_boliviensis_boliviensis
ENSECAG00000011405	BLM	99	63.736	ENSSHAG00000007988	BLM	99	63.463	Sarcophilus_harrisii
ENSECAG00000011405	BLM	58	62.663	ENSSFOG00015015462	blm	67	62.500	Scleropages_formosus
ENSECAG00000011405	BLM	58	58.657	ENSSMAG00000001120	blm	81	48.969	Scophthalmus_maximus
ENSECAG00000011405	BLM	59	63.626	ENSSDUG00000010955	blm	80	52.735	Seriola_dumerili
ENSECAG00000011405	BLM	59	63.400	ENSSLDG00000000634	blm	80	52.582	Seriola_lalandi_dorsalis
ENSECAG00000011405	BLM	90	77.687	ENSSARG00000006398	BLM	95	77.687	Sorex_araneus
ENSECAG00000011405	BLM	82	55.669	ENSSPUG00000000013	BLM	96	56.234	Sphenodon_punctatus
ENSECAG00000011405	BLM	59	62.559	ENSSPAG00000013999	blm	59	62.604	Stegastes_partitus
ENSECAG00000011405	BLM	96	92.572	ENSSSCG00000001816	BLM	99	92.572	Sus_scrofa
ENSECAG00000011405	BLM	80	52.017	ENSTGUG00000009959	-	99	51.507	Taeniopygia_guttata
ENSECAG00000011405	BLM	82	50.167	ENSTRUG00000019860	blm	82	50.042	Takifugu_rubripes
ENSECAG00000011405	BLM	80	51.203	ENSTNIG00000019246	blm	82	51.379	Tetraodon_nigroviridis
ENSECAG00000011405	BLM	81	83.932	ENSTBEG00000006706	BLM	81	83.932	Tupaia_belangeri
ENSECAG00000011405	BLM	100	86.653	ENSTTRG00000016386	BLM	100	87.072	Tursiops_truncatus
ENSECAG00000011405	BLM	100	85.045	ENSUMAG00000009105	BLM	97	94.802	Ursus_maritimus
ENSECAG00000011405	BLM	99	82.448	ENSVPAG00000000085	BLM	99	82.867	Vicugna_pacos
ENSECAG00000011405	BLM	100	84.965	ENSVVUG00000006402	BLM	100	86.230	Vulpes_vulpes
ENSECAG00000011405	BLM	99	51.033	ENSXETG00000007847	blm	54	73.333	Xenopus_tropicalis
ENSECAG00000011405	BLM	55	61.104	ENSXCOG00000020227	blm	54	60.764	Xiphophorus_couchianus
ENSECAG00000011405	BLM	59	64.442	ENSXMAG00000002951	blm	60	64.313	Xiphophorus_maculatus