EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Orthologs
Description
Ensembl ID
ENSECAG00000011411 (Gene tree)
Gene ID
100058878
Gene Symbol
PATL1
Alias
-
Full Name
PAT1 homolog 1%2C processing body mRNA decay factor
Gene Type
protein_coding
Species
Equus_caballus
Status
putative
Strand
Minus strand
Length
37639 bases
Position
chr12:23113138-23150776
Accession
21174
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSECAP00000044562PAT1PF09770.91.3e-1911
ENSECAP00000009699PAT1PF09770.92e-1811
ENSECAP00000046182PAT1PF09770.93.2e-1811
ENSECAP00000043810PAT1PF09770.94.5e-1711
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSECAT00000055758-2382-ENSECAP00000044562793 (aa)XP_014585071UPI0004BDF9A7
ENSECAT00000050957-2625-ENSECAP00000046182874 (aa)--
ENSECAT00000051257-2340-ENSECAP00000043810722 (aa)--
ENSECAT00000012292-3013XM_001498390ENSECAP00000009699772 (aa)XP_001498440F6ZK93
Gene Model
Click here to download ENSECAG00000011411's gene model file
Pathways
Pathway IDPathway NameSource
ecb03018RNA degradationKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSECAG00000011411's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSECAG00000011411PATL16334.908ENSG00000229474PATL29937.363Homo_sapiens
ENSECAG00000011411PATL110096.244ENSG00000166889PATL110096.244Homo_sapiens
ENSECAG00000011411PATL16834.743ENSAPOG00000022988patl27333.702Acanthochromis_polyacanthus
ENSECAG00000011411PATL15453.237ENSAPOG00000021290patl19846.241Acanthochromis_polyacanthus
ENSECAG00000011411PATL15935.076ENSAMEG00000014997PATL27535.194Ailuropoda_melanoleuca
ENSECAG00000011411PATL110095.596ENSAMEG00000014215PATL110095.596Ailuropoda_melanoleuca
ENSECAG00000011411PATL19645.839ENSACIG00000005182patl19946.402Amphilophus_citrinellus
ENSECAG00000011411PATL16934.244ENSAOCG00000023738patl25933.138Amphiprion_ocellaris
ENSECAG00000011411PATL15680.645ENSAPEG00000021391patl18159.722Amphiprion_percula
ENSECAG00000011411PATL16733.784ENSAPEG00000011299patl27132.681Amphiprion_percula
ENSECAG00000011411PATL18678.788ENSATEG00000002230patl18354.545Anabas_testudineus
ENSECAG00000011411PATL16434.911ENSATEG00000019567patl27034.517Anabas_testudineus
ENSECAG00000011411PATL17670.833ENSAPLG00000013394PATL19970.727Anas_platyrhynchos
ENSECAG00000011411PATL15339.467ENSAPLG00000003980PATL26439.563Anas_platyrhynchos
ENSECAG00000011411PATL19979.948ENSACAG00000006607PATL19979.351Anolis_carolinensis
ENSECAG00000011411PATL110096.373ENSANAG00000023078PATL110096.373Aotus_nancymaae
ENSECAG00000011411PATL16135.699ENSACLG00000010326patl25436.277Astatotilapia_calliptera
ENSECAG00000011411PATL16266.667ENSACLG00000005144patl18450.305Astatotilapia_calliptera
ENSECAG00000011411PATL19131.994ENSAMXG00000020293patl26734.201Astyanax_mexicanus
ENSECAG00000011411PATL19941.769ENSAMXG00000010731patl19946.790Astyanax_mexicanus
ENSECAG00000011411PATL110096.244ENSBTAG00000005913PATL110096.244Bos_taurus
ENSECAG00000011411PATL110096.373ENSCJAG00000016192PATL110096.373Callithrix_jacchus
ENSECAG00000011411PATL16236.214ENSCJAG00000002379PATL27237.198Callithrix_jacchus
ENSECAG00000011411PATL110096.373ENSCAFG00000007581PATL110096.373Canis_familiaris
ENSECAG00000011411PATL16435.010ENSCAFG00000013629PATL27236.496Canis_familiaris
ENSECAG00000011411PATL19996.345ENSCAFG00020001648PATL110096.345Canis_lupus_dingo
ENSECAG00000011411PATL16435.010ENSCAFG00020022169PATL27236.562Canis_lupus_dingo
ENSECAG00000011411PATL110094.948ENSCHIG00000025913PATL110094.948Capra_hircus
ENSECAG00000011411PATL15937.797ENSCHIG00000026665PATL27438.278Capra_hircus
ENSECAG00000011411PATL19995.579ENSTSYG00000012748PATL19695.319Carlito_syrichta
ENSECAG00000011411PATL110090.815ENSCAPG00000013668PATL19990.815Cavia_aperea
ENSECAG00000011411PATL110088.875ENSCPOG00000006827PATL110089.381Cavia_porcellus
ENSECAG00000011411PATL110096.632ENSCCAG00000023759PATL110096.632Cebus_capucinus
ENSECAG00000011411PATL16335.041ENSCCAG00000025261PATL27237.379Cebus_capucinus
ENSECAG00000011411PATL110096.373ENSCATG00000009629PATL110096.373Cercocebus_atys
ENSECAG00000011411PATL15634.694ENSCLAG00000014407PATL27335.969Chinchilla_lanigera
ENSECAG00000011411PATL19990.743ENSCLAG00000003427PATL110090.613Chinchilla_lanigera
ENSECAG00000011411PATL19096.126ENSCSAG00000006095PATL110096.126Chlorocebus_sabaeus
ENSECAG00000011411PATL16896.009ENSCHOG00000001611PATL18496.009Choloepus_hoffmanni
ENSECAG00000011411PATL15340.049ENSCPBG00000006150PATL25939.563Chrysemys_picta_bellii
ENSECAG00000011411PATL16334.426ENSCANG00000013856PATL27436.854Colobus_angolensis_palliatus
ENSECAG00000011411PATL19996.757ENSCANG00000039197PATL19997.391Colobus_angolensis_palliatus
ENSECAG00000011411PATL110095.337ENSCGRG00001024927Patl110095.337Cricetulus_griseus_chok1gshd
ENSECAG00000011411PATL110094.825ENSCGRG00000000461Patl110095.306Cricetulus_griseus_crigri
ENSECAG00000011411PATL16433.467ENSCSEG00000009438patl26333.125Cynoglossus_semilaevis
ENSECAG00000011411PATL18576.667ENSCSEG00000008261patl18253.488Cynoglossus_semilaevis
ENSECAG00000011411PATL16330.333ENSCVAG00000016203patl26331.264Cyprinodon_variegatus
ENSECAG00000011411PATL18951.799ENSCVAG00000006664patl110046.018Cyprinodon_variegatus
ENSECAG00000011411PATL19946.618ENSDARG00000017423patl110046.498Danio_rerio
ENSECAG00000011411PATL16735.593ENSDARG00000089567patl26535.490Danio_rerio
ENSECAG00000011411PATL19989.831ENSDNOG00000038865PATL19895.588Dasypus_novemcinctus
ENSECAG00000011411PATL110095.337ENSDORG00000000237Patl110095.337Dipodomys_ordii
ENSECAG00000011411PATL15136.829ENSDORG00000026649Patl27235.806Dipodomys_ordii
ENSECAG00000011411PATL110099.870ENSEASG00005007963PATL110099.870Equus_asinus_asinus
ENSECAG00000011411PATL18371.429ENSELUG00000024249patl18068.333Esox_lucius
ENSECAG00000011411PATL16934.317ENSELUG00000023244patl25436.804Esox_lucius
ENSECAG00000011411PATL110096.114ENSFCAG00000015573PATL110096.114Felis_catus
ENSECAG00000011411PATL15935.652ENSFCAG00000027170PATL27335.835Felis_catus
ENSECAG00000011411PATL19980.494ENSFALG00000012150PATL19978.906Ficedula_albicollis
ENSECAG00000011411PATL19991.134ENSFDAG00000016128PATL110091.004Fukomys_damarensis
ENSECAG00000011411PATL15134.925ENSFDAG00000012242PATL27336.181Fukomys_damarensis
ENSECAG00000011411PATL16166.667ENSFHEG00000017790patl18358.333Fundulus_heteroclitus
ENSECAG00000011411PATL16131.818ENSGMOG00000005666patl29934.286Gadus_morhua
ENSECAG00000011411PATL19977.836ENSGALG00000042641PATL110077.575Gallus_gallus
ENSECAG00000011411PATL16635.673ENSGAFG00000019344patl25536.804Gambusia_affinis
ENSECAG00000011411PATL16458.904ENSGAFG00000006508patl18458.904Gambusia_affinis
ENSECAG00000011411PATL19948.082ENSGACG00000016448patl19949.424Gasterosteus_aculeatus
ENSECAG00000011411PATL110083.850ENSGAGG00000004461PATL110084.406Gopherus_agassizii
ENSECAG00000011411PATL110096.244ENSGGOG00000004335PATL110096.244Gorilla_gorilla
ENSECAG00000011411PATL16334.908ENSGGOG00000025923PATL27436.768Gorilla_gorilla
ENSECAG00000011411PATL16266.667ENSHBUG00000005365patl18450.305Haplochromis_burtoni
ENSECAG00000011411PATL16135.073ENSHBUG00000005929patl26136.038Haplochromis_burtoni
ENSECAG00000011411PATL110091.451ENSHGLG00000018173PATL110091.580Heterocephalus_glaber_female
ENSECAG00000011411PATL19989.831ENSHGLG00100003453PATL110089.961Heterocephalus_glaber_male
ENSECAG00000011411PATL19465.000ENSHCOG00000001898patl18454.430Hippocampus_comes
ENSECAG00000011411PATL15635.374ENSIPUG00000020692patl25635.922Ictalurus_punctatus
ENSECAG00000011411PATL15936.580ENSSTOG00000033848PATL27236.867Ictidomys_tridecemlineatus
ENSECAG00000011411PATL19896.579ENSSTOG00000013764PATL19996.579Ictidomys_tridecemlineatus
ENSECAG00000011411PATL19994.256ENSJJAG00000010135Patl110094.256Jaculus_jaculus
ENSECAG00000011411PATL16931.835ENSKMAG00000021275patl25434.129Kryptolebias_marmoratus
ENSECAG00000011411PATL18780.000ENSKMAG00000020848patl17965.385Kryptolebias_marmoratus
ENSECAG00000011411PATL16135.356ENSLBEG00000022344patl25834.737Labrus_bergylta
ENSECAG00000011411PATL19268.333ENSLBEG00000023617patl17968.333Labrus_bergylta
ENSECAG00000011411PATL19856.680ENSLACG00000004640PATL19956.193Latimeria_chalumnae
ENSECAG00000011411PATL19830.779ENSLACG00000005291-9730.461Latimeria_chalumnae
ENSECAG00000011411PATL19947.694ENSLOCG00000000717patl19947.947Lepisosteus_oculatus
ENSECAG00000011411PATL110096.114ENSLAFG00000015161PATL110096.114Loxodonta_africana
ENSECAG00000011411PATL15038.107ENSLAFG00000031124PATL27137.340Loxodonta_africana
ENSECAG00000011411PATL110096.373ENSMFAG00000040851PATL110096.373Macaca_fascicularis
ENSECAG00000011411PATL110096.373ENSMMUG00000017287PATL110096.373Macaca_mulatta
ENSECAG00000011411PATL110096.373ENSMNEG00000038692PATL110096.373Macaca_nemestrina
ENSECAG00000011411PATL110096.244ENSMLEG00000030044PATL110096.244Mandrillus_leucophaeus
ENSECAG00000011411PATL16034.737ENSMAMG00000013327patl26135.308Mastacembelus_armatus
ENSECAG00000011411PATL15677.419ENSMAMG00000003950patl19846.957Mastacembelus_armatus
ENSECAG00000011411PATL16266.667ENSMZEG00005013404patl18450.305Maylandia_zebra
ENSECAG00000011411PATL16135.699ENSMZEG00005014292patl25436.277Maylandia_zebra
ENSECAG00000011411PATL19477.599ENSMGAG00000003406PATL19976.011Meleagris_gallopavo
ENSECAG00000011411PATL18594.785ENSMAUG00000012059Patl19694.785Mesocricetus_auratus
ENSECAG00000011411PATL19992.198ENSMICG00000004172PATL19897.476Microcebus_murinus
ENSECAG00000011411PATL15236.567ENSMOCG00000015367Patl27235.980Microtus_ochrogaster
ENSECAG00000011411PATL110095.207ENSMOCG00000010087Patl110095.207Microtus_ochrogaster
ENSECAG00000011411PATL16030.561ENSMMOG00000001299patl26031.591Mola_mola
ENSECAG00000011411PATL15937.229ENSMODG00000017690PATL27137.204Monodelphis_domestica
ENSECAG00000011411PATL110087.969ENSMODG00000020201PATL110087.969Monodelphis_domestica
ENSECAG00000011411PATL15434.845ENSMALG00000008131patl25234.988Monopterus_albus
ENSECAG00000011411PATL19439.103ENSMALG00000018706patl19355.764Monopterus_albus
ENSECAG00000011411PATL110094.948MGP_CAROLIEiJ_G0022739Patl110094.948Mus_caroli
ENSECAG00000011411PATL110094.819ENSMUSG00000046139Patl110094.819Mus_musculus
ENSECAG00000011411PATL110094.560MGP_PahariEiJ_G0014233Patl110094.560Mus_pahari
ENSECAG00000011411PATL110094.948MGP_SPRETEiJ_G0023652Patl110094.948Mus_spretus
ENSECAG00000011411PATL110096.373ENSMPUG00000014607PATL110096.373Mustela_putorius_furo
ENSECAG00000011411PATL110093.653ENSMLUG00000011169PATL110093.653Myotis_lucifugus
ENSECAG00000011411PATL110094.716ENSNGAG00000003682Patl110094.201Nannospalax_galili
ENSECAG00000011411PATL15144.000ENSNBRG00000015372patl19241.040Neolamprologus_brichardi
ENSECAG00000011411PATL16134.864ENSNBRG00000011745patl25835.800Neolamprologus_brichardi
ENSECAG00000011411PATL16335.113ENSNLEG00000005673PATL27536.620Nomascus_leucogenys
ENSECAG00000011411PATL19992.559ENSNLEG00000013081PATL110092.428Nomascus_leucogenys
ENSECAG00000011411PATL16490.774ENSMEUG00000009391PATL17590.774Notamacropus_eugenii
ENSECAG00000011411PATL16894.192ENSOPRG00000007963PATL17994.133Ochotona_princeps
ENSECAG00000011411PATL17388.845ENSODEG00000001792PATL19590.625Octodon_degus
ENSECAG00000011411PATL16135.908ENSONIG00000011519patl25436.516Oreochromis_niloticus
ENSECAG00000011411PATL16266.667ENSONIG00000004170patl110048.000Oreochromis_niloticus
ENSECAG00000011411PATL15186.398ENSOANG00000011117-9686.735Ornithorhynchus_anatinus
ENSECAG00000011411PATL15137.129ENSOANG00000001538-8438.049Ornithorhynchus_anatinus
ENSECAG00000011411PATL110096.632ENSOCUG00000002156PATL110096.632Oryctolagus_cuniculus
ENSECAG00000011411PATL15235.250ENSOCUG00000006339PATL27435.500Oryctolagus_cuniculus
ENSECAG00000011411PATL16433.597ENSORLG00000005780patl26333.533Oryzias_latipes
ENSECAG00000011411PATL16433.992ENSORLG00020016506patl26133.932Oryzias_latipes_hni
ENSECAG00000011411PATL16433.794ENSORLG00015014500patl26333.733Oryzias_latipes_hsok
ENSECAG00000011411PATL18730.882ENSOMEG00000021628patl26234.096Oryzias_melastigma
ENSECAG00000011411PATL16033.820ENSOGAG00000004709PATL27234.772Otolemur_garnettii
ENSECAG00000011411PATL110096.891ENSOGAG00000004351PATL110096.891Otolemur_garnettii
ENSECAG00000011411PATL15836.689ENSOARG00000003762PATL27237.531Ovis_aries
ENSECAG00000011411PATL19995.306ENSOARG00000012005PATL19695.306Ovis_aries
ENSECAG00000011411PATL110096.503ENSPPAG00000034275PATL110096.503Pan_paniscus
ENSECAG00000011411PATL16335.246ENSPPAG00000007221PATL27336.792Pan_paniscus
ENSECAG00000011411PATL15935.435ENSPPRG00000004279PATL27335.507Panthera_pardus
ENSECAG00000011411PATL19995.828ENSPPRG00000020639PATL110094.915Panthera_pardus
ENSECAG00000011411PATL110095.855ENSPTIG00000019298PATL110094.948Panthera_tigris_altaica
ENSECAG00000011411PATL15935.217ENSPTIG00000018964PATL27335.351Panthera_tigris_altaica
ENSECAG00000011411PATL16334.908ENSPTRG00000041536PATL27336.557Pan_troglodytes
ENSECAG00000011411PATL19987.859ENSPTRG00000003697PATL110087.859Pan_troglodytes
ENSECAG00000011411PATL110096.373ENSPANG00000035620PATL110096.373Papio_anubis
ENSECAG00000011411PATL15436.730ENSPKIG00000016887patl25536.730Paramormyrops_kingsleyae
ENSECAG00000011411PATL19945.966ENSPKIG00000016224patl19947.066Paramormyrops_kingsleyae
ENSECAG00000011411PATL15337.349ENSPSIG00000017690PATL29536.855Pelodiscus_sinensis
ENSECAG00000011411PATL110083.463ENSPSIG00000016206PATL19683.075Pelodiscus_sinensis
ENSECAG00000011411PATL15935.714ENSPMGG00000014550patl26336.321Periophthalmus_magnuspinnatus
ENSECAG00000011411PATL18954.436ENSPMGG00000002644patl19945.631Periophthalmus_magnuspinnatus
ENSECAG00000011411PATL110095.207ENSPEMG00000014215Patl110095.207Peromyscus_maniculatus_bairdii
ENSECAG00000011411PATL16234.694ENSPEMG00000016509Patl27036.387Peromyscus_maniculatus_bairdii
ENSECAG00000011411PATL110088.357ENSPCIG00000010852PATL110088.357Phascolarctos_cinereus
ENSECAG00000011411PATL15735.938ENSPCIG00000018256PATL27636.634Phascolarctos_cinereus
ENSECAG00000011411PATL18731.811ENSPFOG00000007305patl25436.320Poecilia_formosa
ENSECAG00000011411PATL110045.520ENSPFOG00000007768patl110047.017Poecilia_formosa
ENSECAG00000011411PATL19730.729ENSPLAG00000020713patl25436.320Poecilia_latipinna
ENSECAG00000011411PATL15553.919ENSPLAG00000018465patl17650.453Poecilia_latipinna
ENSECAG00000011411PATL19731.218ENSPMEG00000018942patl25436.320Poecilia_mexicana
ENSECAG00000011411PATL18548.563ENSPMEG00000006555patl17650.453Poecilia_mexicana
ENSECAG00000011411PATL17947.841ENSPREG00000003874patl17050.174Poecilia_reticulata
ENSECAG00000011411PATL110097.021ENSPPYG00000003230PATL110097.021Pongo_abelii
ENSECAG00000011411PATL110096.114ENSPCOG00000020770PATL110096.114Propithecus_coquereli
ENSECAG00000011411PATL15336.957ENSPCOG00000000295PATL29938.187Propithecus_coquereli
ENSECAG00000011411PATL18591.172ENSPVAG00000015239PATL110091.781Pteropus_vampyrus
ENSECAG00000011411PATL17853.474ENSPNYG00000018936patl19653.453Pundamilia_nyererei
ENSECAG00000011411PATL16134.656ENSPNYG00000017381patl26135.561Pundamilia_nyererei
ENSECAG00000011411PATL16235.983ENSPNAG00000002315patl26335.282Pygocentrus_nattereri
ENSECAG00000011411PATL19945.312ENSPNAG00000017907patl19945.324Pygocentrus_nattereri
ENSECAG00000011411PATL110094.689ENSRNOG00000021052Patl110094.689Rattus_norvegicus
ENSECAG00000011411PATL110085.750ENSRBIG00000032263PATL110085.626Rhinopithecus_bieti
ENSECAG00000011411PATL110096.503ENSRROG00000032861PATL110096.503Rhinopithecus_roxellana
ENSECAG00000011411PATL110096.503ENSSBOG00000025195PATL110096.503Saimiri_boliviensis_boliviensis
ENSECAG00000011411PATL110088.645ENSSHAG00000004309PATL110088.645Sarcophilus_harrisii
ENSECAG00000011411PATL18733.284ENSSFOG00015000720patl26235.785Scleropages_formosus
ENSECAG00000011411PATL16534.051ENSSMAG00000017262patl26335.109Scophthalmus_maximus
ENSECAG00000011411PATL19261.667ENSSMAG00000009482patl18153.086Scophthalmus_maximus
ENSECAG00000011411PATL16235.208ENSSDUG00000022927patl26034.161Seriola_dumerili
ENSECAG00000011411PATL19268.333ENSSDUG00000005362patl17959.722Seriola_dumerili
ENSECAG00000011411PATL19266.667ENSSLDG00000019146patl17958.333Seriola_lalandi_dorsalis
ENSECAG00000011411PATL16834.328ENSSLDG00000017922patl25937.019Seriola_lalandi_dorsalis
ENSECAG00000011411PATL15136.272ENSSARG00000009047PATL27635.696Sorex_araneus
ENSECAG00000011411PATL18096.429ENSSARG00000009600PATL18096.429Sorex_araneus
ENSECAG00000011411PATL110081.371ENSSPUG00000009453PATL110080.595Sphenodon_punctatus
ENSECAG00000011411PATL15453.237ENSSPAG00000003187patl19846.782Stegastes_partitus
ENSECAG00000011411PATL15934.810ENSSPAG00000004784patl26235.446Stegastes_partitus
ENSECAG00000011411PATL110096.891ENSSSCG00000013124PATL110096.891Sus_scrofa
ENSECAG00000011411PATL19979.922ENSTGUG00000006222PATL110078.340Taeniopygia_guttata
ENSECAG00000011411PATL15237.717ENSTGUG00000004619-9838.614Taeniopygia_guttata
ENSECAG00000011411PATL16234.375ENSTRUG00000005647patl26234.167Takifugu_rubripes
ENSECAG00000011411PATL19453.165ENSTRUG00000000709patl19944.866Takifugu_rubripes
ENSECAG00000011411PATL19094.200ENSTBEG00000000796PATL19094.664Tupaia_belangeri
ENSECAG00000011411PATL17296.212ENSTTRG00000009389PATL18496.212Tursiops_truncatus
ENSECAG00000011411PATL15835.000ENSUAMG00000018533PATL27135.280Ursus_americanus
ENSECAG00000011411PATL15935.652ENSUMAG00000007738PATL27135.523Ursus_maritimus
ENSECAG00000011411PATL19996.058ENSUMAG00000018634PATL110096.126Ursus_maritimus
ENSECAG00000011411PATL16597.297ENSVPAG00000009224PATL17697.297Vicugna_pacos
ENSECAG00000011411PATL19996.224ENSVVUG00000016668PATL110096.126Vulpes_vulpes
ENSECAG00000011411PATL16435.211ENSVVUG00000011576PATL27236.562Vulpes_vulpes
ENSECAG00000011411PATL15336.957ENSXETG00000014167patl27535.152Xenopus_tropicalis
ENSECAG00000011411PATL15963.462ENSXCOG00000010808patl19763.462Xiphophorus_couchianus
ENSECAG00000011411PATL18565.385ENSXMAG00000013834patl110042.677Xiphophorus_maculatus
ENSECAG00000011411PATL19530.341ENSXMAG00000018464patl25436.077Xiphophorus_maculatus

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