EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSECAG00000011497 (Gene tree)
Gene ID: 100053867
Gene Symbol: MBD1
Alias: -
Full Name: methyl-CpG binding domain protein 1
Gene Type: protein_coding
Species: Equus_caballus
Status: putative
Strand: Minus strand
Length: 57051 bases
Position: chr8:72187169-72244219
Accession: 20005
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSECAP00000028159	MBD	PF01429.19	1.3e-16	1	1
ENSECAP00000040107	MBD	PF01429.19	1.4e-16	1	1
ENSECAP00000009718	MBD	PF01429.19	1.4e-16	1	1
ENSECAP00000028202	MBD	PF01429.19	1.4e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSECAT00000012312	-	2732	-	ENSECAP00000009718	749 (aa)	-	F7BF66
ENSECAT00000030727	-	1545	-	ENSECAP00000024512	514 (aa)	XP_005612993	UPI000C9E91C3
ENSECAT00000053196	-	2462	-	ENSECAP00000040107	659 (aa)	-	-
ENSECAT00000038309	-	2838	-	ENSECAP00000028202	800 (aa)	-	-
ENSECAT00000052965	-	3358	-	ENSECAP00000028159	785 (aa)	-	-
ENSECAT00000010521	-	1509	-	ENSECAP00000008129	502 (aa)	-	F6PZM5

Gene Model

Click here to download ENSECAG00000011497's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSECAG00000011497's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSECAG00000011497	MBD1	80	88.138	ENSG00000141644	MBD1	99	91.892	Homo_sapiens
ENSECAG00000011497	MBD1	80	90.967	ENSAMEG00000000238	MBD1	96	90.967	Ailuropoda_melanoleuca
ENSECAG00000011497	MBD1	51	34.804	ENSAOCG00000020272	mbd1b	52	33.186	Amphiprion_ocellaris
ENSECAG00000011497	MBD1	51	34.804	ENSAPEG00000023230	mbd1b	52	33.186	Amphiprion_percula
ENSECAG00000011497	MBD1	56	33.641	ENSATEG00000009608	mbd1b	52	31.624	Anabas_testudineus
ENSECAG00000011497	MBD1	52	44.203	ENSACAG00000006091	-	100	43.584	Anolis_carolinensis
ENSECAG00000011497	MBD1	79	87.710	ENSANAG00000036253	MBD1	99	85.417	Aotus_nancymaae
ENSECAG00000011497	MBD1	82	89.362	ENSBTAG00000003801	MBD1	100	89.786	Bos_taurus
ENSECAG00000011497	MBD1	79	87.374	ENSCJAG00000004959	MBD1	99	83.805	Callithrix_jacchus
ENSECAG00000011497	MBD1	80	90.333	ENSCAFG00000018928	MBD1	96	90.174	Canis_familiaris
ENSECAG00000011497	MBD1	81	90.980	ENSCAFG00020024272	MBD1	100	90.824	Canis_lupus_dingo
ENSECAG00000011497	MBD1	80	89.621	ENSCHIG00000021134	MBD1	100	89.621	Capra_hircus
ENSECAG00000011497	MBD1	79	85.619	ENSTSYG00000000509	MBD1	99	86.699	Carlito_syrichta
ENSECAG00000011497	MBD1	56	83.178	ENSCAPG00000015782	MBD1	79	83.178	Cavia_aperea
ENSECAG00000011497	MBD1	81	73.313	ENSCPOG00000001671	MBD1	100	71.118	Cavia_porcellus
ENSECAG00000011497	MBD1	93	83.567	ENSCCAG00000034600	MBD1	97	82.022	Cebus_capucinus
ENSECAG00000011497	MBD1	80	88.303	ENSCATG00000029959	MBD1	100	86.656	Cercocebus_atys
ENSECAG00000011497	MBD1	83	83.562	ENSCLAG00000007457	MBD1	92	83.562	Chinchilla_lanigera
ENSECAG00000011497	MBD1	80	88.303	ENSCSAG00000018070	MBD1	100	86.656	Chlorocebus_sabaeus
ENSECAG00000011497	MBD1	80	88.303	ENSCANG00000033425	MBD1	100	86.656	Colobus_angolensis_palliatus
ENSECAG00000011497	MBD1	80	73.770	ENSCGRG00001014843	Mbd1	100	73.607	Cricetulus_griseus_chok1gshd
ENSECAG00000011497	MBD1	81	53.168	ENSCGRG00000014135	Mbd1	100	52.705	Cricetulus_griseus_crigri
ENSECAG00000011497	MBD1	78	87.931	ENSDNOG00000015998	MBD1	100	84.243	Dasypus_novemcinctus
ENSECAG00000011497	MBD1	73	79.885	ENSDORG00000013917	Mbd1	100	77.119	Dipodomys_ordii
ENSECAG00000011497	MBD1	81	99.687	ENSEASG00005003857	MBD1	100	99.687	Equus_asinus_asinus
ENSECAG00000011497	MBD1	96	86.772	ENSFCAG00000015730	MBD1	99	91.506	Felis_catus
ENSECAG00000011497	MBD1	73	80.453	ENSFDAG00000011085	MBD1	80	86.782	Fukomys_damarensis
ENSECAG00000011497	MBD1	80	88.138	ENSGGOG00000016966	MBD1	100	86.491	Gorilla_gorilla
ENSECAG00000011497	MBD1	80	85.173	ENSHGLG00000008740	MBD1	100	85.173	Heterocephalus_glaber_female
ENSECAG00000011497	MBD1	66	88.961	ENSHGLG00100005198	MBD1	100	88.973	Heterocephalus_glaber_male
ENSECAG00000011497	MBD1	80	81.848	ENSSTOG00000007780	MBD1	100	81.169	Ictidomys_tridecemlineatus
ENSECAG00000011497	MBD1	72	81.609	ENSJJAG00000022859	Mbd1	100	66.355	Jaculus_jaculus
ENSECAG00000011497	MBD1	55	33.184	ENSKMAG00000020760	mbd1b	54	33.491	Kryptolebias_marmoratus
ENSECAG00000011497	MBD1	52	40.201	ENSLACG00000002414	-	52	62.500	Latimeria_chalumnae
ENSECAG00000011497	MBD1	79	77.152	ENSLAFG00000031328	MBD1	100	73.457	Loxodonta_africana
ENSECAG00000011497	MBD1	80	87.974	ENSMFAG00000026335	MBD1	100	86.326	Macaca_fascicularis
ENSECAG00000011497	MBD1	79	87.340	ENSMMUG00000009050	MBD1	99	85.737	Macaca_mulatta
ENSECAG00000011497	MBD1	80	87.974	ENSMNEG00000038822	MBD1	100	86.326	Macaca_nemestrina
ENSECAG00000011497	MBD1	80	88.303	ENSMLEG00000043121	MBD1	100	86.656	Mandrillus_leucophaeus
ENSECAG00000011497	MBD1	54	35.961	ENSMAMG00000023341	-	55	51.042	Mastacembelus_armatus
ENSECAG00000011497	MBD1	80	86.364	ENSMICG00000006414	MBD1	100	86.364	Microcebus_murinus
ENSECAG00000011497	MBD1	52	43.350	ENSMODG00000001286	-	58	41.951	Monodelphis_domestica
ENSECAG00000011497	MBD1	52	33.488	ENSMALG00000007808	mbd1b	52	34.450	Monopterus_albus
ENSECAG00000011497	MBD1	81	65.527	ENSMUSG00000024561	Mbd1	100	64.487	Mus_musculus
ENSECAG00000011497	MBD1	80	66.719	MGP_PahariEiJ_G0019128	Mbd1	100	65.927	Mus_pahari
ENSECAG00000011497	MBD1	79	68.720	MGP_SPRETEiJ_G0023304	Mbd1	99	68.558	Mus_spretus
ENSECAG00000011497	MBD1	80	90.000	ENSMPUG00000008843	MBD1	96	90.000	Mustela_putorius_furo
ENSECAG00000011497	MBD1	82	88.099	ENSMLUG00000008286	MBD1	99	88.136	Myotis_lucifugus
ENSECAG00000011497	MBD1	79	67.105	ENSNGAG00000011412	Mbd1	100	64.939	Nannospalax_galili
ENSECAG00000011497	MBD1	79	69.865	ENSNLEG00000032711	-	88	65.948	Nomascus_leucogenys
ENSECAG00000011497	MBD1	80	87.644	ENSNLEG00000011661	-	100	86.161	Nomascus_leucogenys
ENSECAG00000011497	MBD1	74	83.908	ENSOPRG00000007647	MBD1	100	73.927	Ochotona_princeps
ENSECAG00000011497	MBD1	79	72.910	ENSODEG00000018451	MBD1	100	71.028	Octodon_degus
ENSECAG00000011497	MBD1	68	47.901	ENSOANG00000014593	-	100	46.618	Ornithorhynchus_anatinus
ENSECAG00000011497	MBD1	79	83.333	ENSOCUG00000006554	MBD1	99	83.333	Oryctolagus_cuniculus
ENSECAG00000011497	MBD1	54	30.296	ENSOMEG00000023660	mbd1b	50	32.020	Oryzias_melastigma
ENSECAG00000011497	MBD1	79	85.246	ENSOGAG00000003784	MBD1	97	81.860	Otolemur_garnettii
ENSECAG00000011497	MBD1	79	89.331	ENSOARG00000004218	MBD1	95	88.942	Ovis_aries
ENSECAG00000011497	MBD1	80	87.974	ENSPPAG00000038886	MBD1	100	86.326	Pan_paniscus
ENSECAG00000011497	MBD1	80	91.928	ENSPPRG00000021387	MBD1	100	91.928	Panthera_pardus
ENSECAG00000011497	MBD1	80	91.763	ENSPTIG00000021231	MBD1	100	91.763	Panthera_tigris_altaica
ENSECAG00000011497	MBD1	80	87.974	ENSPTRG00000010021	MBD1	100	86.326	Pan_troglodytes
ENSECAG00000011497	MBD1	79	88.047	ENSPANG00000010867	MBD1	99	85.897	Papio_anubis
ENSECAG00000011497	MBD1	81	58.673	ENSPEMG00000022630	Mbd1	100	57.251	Peromyscus_maniculatus_bairdii
ENSECAG00000011497	MBD1	77	46.557	ENSPCIG00000027937	-	79	45.584	Phascolarctos_cinereus
ENSECAG00000011497	MBD1	81	88.033	ENSPPYG00000009158	MBD1	93	86.129	Pongo_abelii
ENSECAG00000011497	MBD1	80	77.888	ENSPCAG00000001648	MBD1	93	87.500	Procavia_capensis
ENSECAG00000011497	MBD1	80	89.127	ENSPCOG00000012450	MBD1	100	88.962	Propithecus_coquereli
ENSECAG00000011497	MBD1	79	51.696	ENSRNOG00000024104	Mbd1	100	49.623	Rattus_norvegicus
ENSECAG00000011497	MBD1	80	80.066	ENSRBIG00000041294	MBD1	100	78.418	Rhinopithecus_bieti
ENSECAG00000011497	MBD1	80	87.809	ENSRROG00000032517	MBD1	100	86.161	Rhinopithecus_roxellana
ENSECAG00000011497	MBD1	91	82.466	ENSSBOG00000027169	MBD1	97	81.301	Saimiri_boliviensis_boliviensis
ENSECAG00000011497	MBD1	61	46.154	ENSSHAG00000003661	-	100	46.383	Sarcophilus_harrisii
ENSECAG00000011497	MBD1	81	87.403	ENSSSCG00000004516	MBD1	100	87.479	Sus_scrofa
ENSECAG00000011497	MBD1	62	80.000	ENSTBEG00000012651	-	68	80.000	Tupaia_belangeri
ENSECAG00000011497	MBD1	80	88.962	ENSTTRG00000015523	MBD1	100	88.962	Tursiops_truncatus
ENSECAG00000011497	MBD1	81	86.625	ENSUAMG00000004752	MBD1	100	90.000	Ursus_americanus
ENSECAG00000011497	MBD1	80	91.433	ENSUMAG00000002947	MBD1	100	91.433	Ursus_maritimus