EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSECAG00000011499 (Gene tree)
Gene ID: 100064686
Gene Symbol: PRDM10
Alias: -
Full Name: PR/SET domain 10
Gene Type: protein_coding
Species: Equus_caballus
Status: putative
Strand: Minus strand
Length: 56609 bases
Position: chr7:39592702-39649310
Accession: 21812
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSECAP00000028712	zf-C2H2	PF00096.26	2.9e-33	1	5
ENSECAP00000028712	zf-C2H2	PF00096.26	2.9e-33	2	5
ENSECAP00000028712	zf-C2H2	PF00096.26	2.9e-33	3	5
ENSECAP00000028712	zf-C2H2	PF00096.26	2.9e-33	4	5
ENSECAP00000028712	zf-C2H2	PF00096.26	2.9e-33	5	5
ENSECAP00000026692	zf-C2H2	PF00096.26	3.5e-33	1	5
ENSECAP00000026692	zf-C2H2	PF00096.26	3.5e-33	2	5
ENSECAP00000026692	zf-C2H2	PF00096.26	3.5e-33	3	5
ENSECAP00000026692	zf-C2H2	PF00096.26	3.5e-33	4	5
ENSECAP00000026692	zf-C2H2	PF00096.26	3.5e-33	5	5
ENSECAP00000009714	zf-C2H2	PF00096.26	7.7e-33	1	5
ENSECAP00000009714	zf-C2H2	PF00096.26	7.7e-33	2	5
ENSECAP00000009714	zf-C2H2	PF00096.26	7.7e-33	3	5
ENSECAP00000009714	zf-C2H2	PF00096.26	7.7e-33	4	5
ENSECAP00000009714	zf-C2H2	PF00096.26	7.7e-33	5	5
ENSECAP00000041317	zf-C2H2	PF00096.26	1.4e-27	1	4
ENSECAP00000041317	zf-C2H2	PF00096.26	1.4e-27	2	4
ENSECAP00000041317	zf-C2H2	PF00096.26	1.4e-27	3	4
ENSECAP00000041317	zf-C2H2	PF00096.26	1.4e-27	4	4
ENSECAP00000043986	zf-C2H2	PF00096.26	2.6e-27	1	4
ENSECAP00000043986	zf-C2H2	PF00096.26	2.6e-27	2	4
ENSECAP00000043986	zf-C2H2	PF00096.26	2.6e-27	3	4
ENSECAP00000043986	zf-C2H2	PF00096.26	2.6e-27	4	4
ENSECAP00000009737	zf-C2H2	PF00096.26	2.7e-27	1	4
ENSECAP00000009737	zf-C2H2	PF00096.26	2.7e-27	2	4
ENSECAP00000009737	zf-C2H2	PF00096.26	2.7e-27	3	4
ENSECAP00000009737	zf-C2H2	PF00096.26	2.7e-27	4	4
ENSECAP00000041317	zf-met	PF12874.7	5.8e-09	1	2
ENSECAP00000041317	zf-met	PF12874.7	5.8e-09	2	2
ENSECAP00000043986	zf-met	PF12874.7	2.8e-06	1	2
ENSECAP00000043986	zf-met	PF12874.7	2.8e-06	2	2
ENSECAP00000009737	zf-met	PF12874.7	2.9e-06	1	2
ENSECAP00000009737	zf-met	PF12874.7	2.9e-06	2	2
ENSECAP00000028712	zf-met	PF12874.7	6.6e-06	1	2
ENSECAP00000028712	zf-met	PF12874.7	6.6e-06	2	2
ENSECAP00000026692	zf-met	PF12874.7	7.1e-06	1	2
ENSECAP00000026692	zf-met	PF12874.7	7.1e-06	2	2
ENSECAP00000009714	zf-met	PF12874.7	8.7e-06	1	2
ENSECAP00000009714	zf-met	PF12874.7	8.7e-06	2	2
ENSECAP00000028712	zf-C2H2_jaz	PF12171.8	5.6e-17	1	1
ENSECAP00000026692	zf-C2H2_jaz	PF12171.8	8.3e-17	1	1
ENSECAP00000009714	zf-C2H2_jaz	PF12171.8	1.4e-16	1	1
ENSECAP00000041317	zf-C2H2_jaz	PF12171.8	3.2e-14	1	1
ENSECAP00000043986	zf-C2H2_jaz	PF12171.8	2.1e-12	1	1
ENSECAP00000009737	zf-C2H2_jaz	PF12171.8	2.1e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSECAT00000038476	-	3294	-	ENSECAP00000041317	1097 (aa)	-	-
ENSECAT00000012308	-	3453	-	ENSECAP00000009714	1150 (aa)	-	F7BF96
ENSECAT00000049425	-	3237	-	ENSECAP00000026692	1078 (aa)	-	-
ENSECAT00000059637	-	3174	-	ENSECAP00000028712	1057 (aa)	-	-
ENSECAT00000012334	-	3465	-	ENSECAP00000009737	1154 (aa)	-	F7BES2
ENSECAT00000033158	-	3450	-	ENSECAP00000043986	1149 (aa)	-	-

Gene Model

Click here to download ENSECAG00000011499's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSECAG00000011499's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSECAG00000011499	PRDM10	54	38.462	ENSECAG00000015423	PRDM4	54	35.374

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSECAG00000011499	PRDM10	100	95.156	ENSG00000170325	PRDM10	100	95.329	Homo_sapiens
ENSECAG00000011499	PRDM10	99	96.503	ENSAMEG00000002425	PRDM10	100	93.216	Ailuropoda_melanoleuca
ENSECAG00000011499	PRDM10	100	83.765	ENSAPLG00000004858	PRDM10	100	83.707	Anas_platyrhynchos
ENSECAG00000011499	PRDM10	98	96.104	ENSANAG00000022064	PRDM10	91	96.104	Aotus_nancymaae
ENSECAG00000011499	PRDM10	100	95.399	ENSBTAG00000019001	PRDM10	100	96.078	Bos_taurus
ENSECAG00000011499	PRDM10	100	95.065	ENSCJAG00000009235	PRDM10	100	95.065	Callithrix_jacchus
ENSECAG00000011499	PRDM10	100	95.573	ENSCAFG00000010164	PRDM10	100	95.573	Canis_familiaris
ENSECAG00000011499	PRDM10	100	94.288	ENSCAFG00020010152	PRDM10	100	94.203	Canis_lupus_dingo
ENSECAG00000011499	PRDM10	100	95.399	ENSCHIG00000026530	PRDM10	100	95.052	Capra_hircus
ENSECAG00000011499	PRDM10	100	96.194	ENSTSYG00000000544	PRDM10	100	96.194	Carlito_syrichta
ENSECAG00000011499	PRDM10	100	87.035	ENSCAPG00000017296	PRDM10	100	87.035	Cavia_aperea
ENSECAG00000011499	PRDM10	99	85.355	ENSCPOG00000000389	PRDM10	97	86.197	Cavia_porcellus
ENSECAG00000011499	PRDM10	100	95.065	ENSCCAG00000024567	PRDM10	100	94.892	Cebus_capucinus
ENSECAG00000011499	PRDM10	100	96.101	ENSCATG00000040031	PRDM10	100	96.101	Cercocebus_atys
ENSECAG00000011499	PRDM10	100	91.602	ENSCLAG00000014605	PRDM10	98	100.000	Chinchilla_lanigera
ENSECAG00000011499	PRDM10	100	96.274	ENSCSAG00000002202	PRDM10	100	96.274	Chlorocebus_sabaeus
ENSECAG00000011499	PRDM10	99	86.428	ENSCPBG00000026880	PRDM10	99	82.402	Chrysemys_picta_bellii
ENSECAG00000011499	PRDM10	100	95.931	ENSCANG00000032669	PRDM10	100	95.931	Colobus_angolensis_palliatus
ENSECAG00000011499	PRDM10	100	91.955	ENSCGRG00001021647	Prdm10	96	100.000	Cricetulus_griseus_chok1gshd
ENSECAG00000011499	PRDM10	100	91.955	ENSCGRG00000006562	Prdm10	96	100.000	Cricetulus_griseus_crigri
ENSECAG00000011499	PRDM10	82	94.515	ENSDNOG00000001366	PRDM10	95	94.515	Dasypus_novemcinctus
ENSECAG00000011499	PRDM10	100	93.235	ENSDORG00000014292	Prdm10	100	93.148	Dipodomys_ordii
ENSECAG00000011499	PRDM10	100	99.826	ENSEASG00005022914	PRDM10	100	99.826	Equus_asinus_asinus
ENSECAG00000011499	PRDM10	99	96.490	ENSFCAG00000004111	PRDM10	96	96.549	Felis_catus
ENSECAG00000011499	PRDM10	99	85.161	ENSFALG00000004873	PRDM10	100	80.017	Ficedula_albicollis
ENSECAG00000011499	PRDM10	98	94.872	ENSFDAG00000017311	PRDM10	96	98.529	Fukomys_damarensis
ENSECAG00000011499	PRDM10	99	84.245	ENSGALG00000033660	PRDM10	99	84.546	Gallus_gallus
ENSECAG00000011499	PRDM10	99	64.834	ENSGACG00000012293	prdm10	98	66.667	Gasterosteus_aculeatus
ENSECAG00000011499	PRDM10	100	83.849	ENSGAGG00000012523	PRDM10	99	83.591	Gopherus_agassizii
ENSECAG00000011499	PRDM10	100	95.851	ENSGGOG00000015359	PRDM10	100	95.851	Gorilla_gorilla
ENSECAG00000011499	PRDM10	100	91.312	ENSHGLG00000001106	PRDM10	96	98.529	Heterocephalus_glaber_female
ENSECAG00000011499	PRDM10	100	91.553	ENSHGLG00100002350	PRDM10	96	98.529	Heterocephalus_glaber_male
ENSECAG00000011499	PRDM10	100	95.152	ENSSTOG00000002015	PRDM10	100	95.152	Ictidomys_tridecemlineatus
ENSECAG00000011499	PRDM10	94	91.527	ENSJJAG00000021493	Prdm10	90	91.975	Jaculus_jaculus
ENSECAG00000011499	PRDM10	98	93.506	ENSLAFG00000031867	PRDM10	100	91.230	Loxodonta_africana
ENSECAG00000011499	PRDM10	100	96.187	ENSMFAG00000031008	PRDM10	100	96.187	Macaca_fascicularis
ENSECAG00000011499	PRDM10	100	96.187	ENSMMUG00000017555	PRDM10	100	96.187	Macaca_mulatta
ENSECAG00000011499	PRDM10	100	96.101	ENSMNEG00000036493	PRDM10	100	96.101	Macaca_nemestrina
ENSECAG00000011499	PRDM10	92	98.765	ENSMLEG00000042028	PRDM10	100	96.078	Mandrillus_leucophaeus
ENSECAG00000011499	PRDM10	99	84.106	ENSMGAG00000001112	PRDM10	100	81.004	Meleagris_gallopavo
ENSECAG00000011499	PRDM10	98	97.403	ENSMICG00000013888	PRDM10	100	95.407	Microcebus_murinus
ENSECAG00000011499	PRDM10	99	92.024	ENSMOCG00000021853	Prdm10	99	98.438	Microtus_ochrogaster
ENSECAG00000011499	PRDM10	82	86.833	ENSMODG00000004979	PRDM10	99	88.322	Monodelphis_domestica
ENSECAG00000011499	PRDM10	99	92.836	ENSMUSG00000042496	Prdm10	96	98.529	Mus_musculus
ENSECAG00000011499	PRDM10	100	92.148	MGP_SPRETEiJ_G0033061	-	96	98.529	Mus_spretus
ENSECAG00000011499	PRDM10	100	96.875	ENSMPUG00000008711	PRDM10	99	96.875	Mustela_putorius_furo
ENSECAG00000011499	PRDM10	100	95.065	ENSMLUG00000013051	PRDM10	100	94.805	Myotis_lucifugus
ENSECAG00000011499	PRDM10	100	94.173	ENSNGAG00000000580	Prdm10	100	94.267	Nannospalax_galili
ENSECAG00000011499	PRDM10	100	96.187	ENSNLEG00000007488	PRDM10	100	96.187	Nomascus_leucogenys
ENSECAG00000011499	PRDM10	100	91.164	ENSODEG00000005309	PRDM10	97	100.000	Octodon_degus
ENSECAG00000011499	PRDM10	99	81.716	ENSOANG00000000577	-	100	79.266	Ornithorhynchus_anatinus
ENSECAG00000011499	PRDM10	100	94.102	ENSOCUG00000003736	PRDM10	100	93.322	Oryctolagus_cuniculus
ENSECAG00000011499	PRDM10	100	93.955	ENSOGAG00000010723	PRDM10	100	93.869	Otolemur_garnettii
ENSECAG00000011499	PRDM10	100	95.486	ENSOARG00000014507	PRDM10	100	95.139	Ovis_aries
ENSECAG00000011499	PRDM10	100	95.419	ENSPPAG00000042881	PRDM10	100	95.506	Pan_paniscus
ENSECAG00000011499	PRDM10	100	96.354	ENSPPRG00000007002	PRDM10	100	96.354	Panthera_pardus
ENSECAG00000011499	PRDM10	100	96.267	ENSPTIG00000013331	PRDM10	100	96.267	Panthera_tigris_altaica
ENSECAG00000011499	PRDM10	100	95.851	ENSPTRG00000004477	PRDM10	100	95.851	Pan_troglodytes
ENSECAG00000011499	PRDM10	100	96.101	ENSPANG00000017470	PRDM10	100	96.101	Papio_anubis
ENSECAG00000011499	PRDM10	98	94.872	ENSPEMG00000014985	Prdm10	100	90.894	Peromyscus_maniculatus_bairdii
ENSECAG00000011499	PRDM10	100	95.848	ENSPPYG00000004061	PRDM10	100	95.848	Pongo_abelii
ENSECAG00000011499	PRDM10	90	94.545	ENSPCAG00000014514	PRDM10	92	94.545	Procavia_capensis
ENSECAG00000011499	PRDM10	98	97.403	ENSPCOG00000023406	PRDM10	91	97.403	Propithecus_coquereli
ENSECAG00000011499	PRDM10	100	97.232	ENSPVAG00000012764	PRDM10	100	97.232	Pteropus_vampyrus
ENSECAG00000011499	PRDM10	100	92.641	ENSRNOG00000007853	Prdm10	100	92.121	Rattus_norvegicus
ENSECAG00000011499	PRDM10	100	95.934	ENSRBIG00000030924	PRDM10	100	95.934	Rhinopithecus_bieti
ENSECAG00000011499	PRDM10	100	95.934	ENSRROG00000034334	PRDM10	100	95.934	Rhinopithecus_roxellana
ENSECAG00000011499	PRDM10	100	94.983	ENSSBOG00000008773	PRDM10	100	94.983	Saimiri_boliviensis_boliviensis
ENSECAG00000011499	PRDM10	98	89.610	ENSSHAG00000004503	PRDM10	99	88.114	Sarcophilus_harrisii
ENSECAG00000011499	PRDM10	68	100.000	ENSSARG00000013953	-	67	100.000	Sorex_araneus
ENSECAG00000011499	PRDM10	99	85.620	ENSSPUG00000001178	PRDM10	97	85.056	Sphenodon_punctatus
ENSECAG00000011499	PRDM10	100	95.156	ENSSSCG00000015243	PRDM10	99	95.691	Sus_scrofa
ENSECAG00000011499	PRDM10	99	85.108	ENSTGUG00000000530	PRDM10	100	82.545	Taeniopygia_guttata
ENSECAG00000011499	PRDM10	94	96.307	ENSTBEG00000007221	PRDM10	94	94.690	Tupaia_belangeri
ENSECAG00000011499	PRDM10	100	93.166	ENSTTRG00000009189	PRDM10	100	91.515	Tursiops_truncatus
ENSECAG00000011499	PRDM10	90	96.973	ENSUAMG00000018832	PRDM10	94	97.379	Ursus_americanus
ENSECAG00000011499	PRDM10	100	96.695	ENSUMAG00000003167	PRDM10	99	97.062	Ursus_maritimus
ENSECAG00000011499	PRDM10	100	96.528	ENSVVUG00000019878	PRDM10	100	96.528	Vulpes_vulpes
ENSECAG00000011499	PRDM10	99	71.778	ENSXETG00000032173	PRDM10	100	67.866	Xenopus_tropicalis