EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSECAG00000011505 (Gene tree)
Gene ID: 100050375
Gene Symbol: CHD9
Alias: -
Full Name: chromodomain helicase DNA binding protein 9
Gene Type: protein_coding
Species: Equus_caballus
Status: putative
Strand: Plus strand
Length: 145579 bases
Position: chr3:6427168-6572746
Accession: 16491
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSECAP00000040615	ResIII	PF04851.15	7.8e-06	1	1
ENSECAP00000009670	ResIII	PF04851.15	8e-06	1	1
ENSECAP00000040615	BRK	PF07533.16	1.6e-30	1	2
ENSECAP00000040615	BRK	PF07533.16	1.6e-30	2	2
ENSECAP00000009670	BRK	PF07533.16	1.6e-30	1	2
ENSECAP00000009670	BRK	PF07533.16	1.6e-30	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSECAT00000032782	-	8766	-	ENSECAP00000040615	2866 (aa)	-	-
ENSECAT00000012261	-	8877	-	ENSECAP00000009670	2903 (aa)	XP_023492745	F6ZQU0

Gene Model

Click here to download ENSECAG00000011505's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSECAG00000011505's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSECAG00000011505	CHD9	85	67.346	ENSECAG00000001445	CHD7	91	67.179
ENSECAG00000011505	CHD9	68	65.990	ENSECAG00000011761	CHD6	79	62.556
ENSECAG00000011505	CHD9	74	71.650	ENSECAG00000016102	CHD8	74	66.901

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSECAG00000011505	CHD9	100	96.176	ENSG00000177200	CHD9	100	98.535	Homo_sapiens
ENSECAG00000011505	CHD9	85	70.734	ENSAPOG00000023034	chd9	65	76.741	Acanthochromis_polyacanthus
ENSECAG00000011505	CHD9	100	97.142	ENSAMEG00000016232	CHD9	100	97.142	Ailuropoda_melanoleuca
ENSECAG00000011505	CHD9	79	69.741	ENSACIG00000004097	chd9	73	61.680	Amphilophus_citrinellus
ENSECAG00000011505	CHD9	84	71.154	ENSAOCG00000005487	chd9	66	76.727	Amphiprion_ocellaris
ENSECAG00000011505	CHD9	84	71.070	ENSAPEG00000009859	chd9	65	76.741	Amphiprion_percula
ENSECAG00000011505	CHD9	84	70.093	ENSATEG00000002748	chd9	97	64.136	Anabas_testudineus
ENSECAG00000011505	CHD9	99	83.906	ENSAPLG00000002826	CHD9	74	85.734	Anas_platyrhynchos
ENSECAG00000011505	CHD9	99	80.720	ENSACAG00000016150	CHD9	98	81.045	Anolis_carolinensis
ENSECAG00000011505	CHD9	100	96.176	ENSANAG00000015630	CHD9	100	97.436	Aotus_nancymaae
ENSECAG00000011505	CHD9	91	70.640	ENSACLG00000016899	chd9	73	62.983	Astatotilapia_calliptera
ENSECAG00000011505	CHD9	99	61.392	ENSAMXG00000005652	chd9	68	75.738	Astyanax_mexicanus
ENSECAG00000011505	CHD9	100	96.486	ENSBTAG00000002287	CHD9	100	96.486	Bos_taurus
ENSECAG00000011505	CHD9	100	94.936	ENSCJAG00000001573	CHD9	100	97.802	Callithrix_jacchus
ENSECAG00000011505	CHD9	100	97.038	ENSCAFG00000009699	CHD9	100	97.038	Canis_familiaris
ENSECAG00000011505	CHD9	100	97.038	ENSCAFG00020002879	CHD9	100	99.634	Canis_lupus_dingo
ENSECAG00000011505	CHD9	97	94.311	ENSCHIG00000021000	CHD9	99	94.317	Capra_hircus
ENSECAG00000011505	CHD9	100	96.245	ENSTSYG00000007693	CHD9	100	98.535	Carlito_syrichta
ENSECAG00000011505	CHD9	81	79.093	ENSCAPG00000011604	CHD9	81	79.933	Cavia_aperea
ENSECAG00000011505	CHD9	100	91.253	ENSCPOG00000036544	CHD9	100	90.806	Cavia_porcellus
ENSECAG00000011505	CHD9	100	95.419	ENSCCAG00000036178	CHD9	100	97.070	Cebus_capucinus
ENSECAG00000011505	CHD9	100	95.420	ENSCATG00000036753	CHD9	100	97.802	Cercocebus_atys
ENSECAG00000011505	CHD9	99	95.146	ENSCLAG00000007137	CHD9	99	97.110	Chinchilla_lanigera
ENSECAG00000011505	CHD9	100	95.696	ENSCSAG00000005311	CHD9	100	95.696	Chlorocebus_sabaeus
ENSECAG00000011505	CHD9	74	98.077	ENSCHOG00000003935	CHD9	76	98.077	Choloepus_hoffmanni
ENSECAG00000011505	CHD9	99	85.154	ENSCPBG00000012459	CHD9	99	91.908	Chrysemys_picta_bellii
ENSECAG00000011505	CHD9	100	96.040	ENSCANG00000030349	CHD9	100	97.802	Colobus_angolensis_palliatus
ENSECAG00000011505	CHD9	99	91.947	ENSCGRG00001016150	Chd9	99	91.259	Cricetulus_griseus_chok1gshd
ENSECAG00000011505	CHD9	99	91.947	ENSCGRG00000012850	Chd9	99	96.069	Cricetulus_griseus_crigri
ENSECAG00000011505	CHD9	80	68.176	ENSCSEG00000009209	chd9	67	72.258	Cynoglossus_semilaevis
ENSECAG00000011505	CHD9	85	71.127	ENSCVAG00000016195	chd9	73	62.652	Cyprinodon_variegatus
ENSECAG00000011505	CHD9	81	68.436	ENSDARG00000074498	chd9	67	75.046	Danio_rerio
ENSECAG00000011505	CHD9	81	95.198	ENSDNOG00000006045	CHD9	100	95.155	Dasypus_novemcinctus
ENSECAG00000011505	CHD9	69	93.211	ENSDORG00000008523	-	100	92.765	Dipodomys_ordii
ENSECAG00000011505	CHD9	94	97.895	ENSETEG00000009565	CHD9	94	97.895	Echinops_telfairi
ENSECAG00000011505	CHD9	100	99.518	ENSEASG00005014832	CHD9	100	99.526	Equus_asinus_asinus
ENSECAG00000011505	CHD9	82	97.790	ENSEEUG00000014515	CHD9	86	97.790	Erinaceus_europaeus
ENSECAG00000011505	CHD9	75	75.130	ENSELUG00000006031	chd9	84	74.359	Esox_lucius
ENSECAG00000011505	CHD9	100	96.796	ENSFCAG00000022534	CHD9	100	99.267	Felis_catus
ENSECAG00000011505	CHD9	83	87.963	ENSFALG00000013276	CHD9	99	88.181	Ficedula_albicollis
ENSECAG00000011505	CHD9	100	94.697	ENSFDAG00000021037	CHD9	100	94.284	Fukomys_damarensis
ENSECAG00000011505	CHD9	84	70.290	ENSFHEG00000006068	chd9	97	60.187	Fundulus_heteroclitus
ENSECAG00000011505	CHD9	67	76.934	ENSGMOG00000006040	chd9	83	77.001	Gadus_morhua
ENSECAG00000011505	CHD9	96	85.447	ENSGALG00000039178	CHD9	98	85.591	Gallus_gallus
ENSECAG00000011505	CHD9	84	70.113	ENSGAFG00000010014	chd9	92	66.271	Gambusia_affinis
ENSECAG00000011505	CHD9	79	68.328	ENSGACG00000016694	chd9	93	75.153	Gasterosteus_aculeatus
ENSECAG00000011505	CHD9	100	95.902	ENSGGOG00000014816	CHD9	100	98.168	Gorilla_gorilla
ENSECAG00000011505	CHD9	79	70.791	ENSHBUG00000023322	chd9	96	69.930	Haplochromis_burtoni
ENSECAG00000011505	CHD9	100	94.663	ENSHGLG00000014938	CHD9	99	97.572	Heterocephalus_glaber_female
ENSECAG00000011505	CHD9	90	66.439	ENSHCOG00000000937	chd9	67	74.879	Hippocampus_comes
ENSECAG00000011505	CHD9	80	69.898	ENSIPUG00000016448	chd9	98	72.993	Ictalurus_punctatus
ENSECAG00000011505	CHD9	100	94.592	ENSSTOG00000022273	CHD9	99	97.688	Ictidomys_tridecemlineatus
ENSECAG00000011505	CHD9	69	93.945	ENSJJAG00000015741	-	100	93.945	Jaculus_jaculus
ENSECAG00000011505	CHD9	85	70.059	ENSKMAG00000016784	chd9	66	75.045	Kryptolebias_marmoratus
ENSECAG00000011505	CHD9	92	62.807	ENSLBEG00000012077	chd9	66	74.037	Labrus_bergylta
ENSECAG00000011505	CHD9	99	72.335	ENSLACG00000005557	CHD9	73	72.508	Latimeria_chalumnae
ENSECAG00000011505	CHD9	87	73.567	ENSLOCG00000007225	chd9	68	80.132	Lepisosteus_oculatus
ENSECAG00000011505	CHD9	100	95.007	ENSLAFG00000015374	CHD9	100	95.007	Loxodonta_africana
ENSECAG00000011505	CHD9	100	96.006	ENSMFAG00000041354	CHD9	100	97.802	Macaca_fascicularis
ENSECAG00000011505	CHD9	100	96.040	ENSMMUG00000016310	CHD9	100	97.802	Macaca_mulatta
ENSECAG00000011505	CHD9	100	96.006	ENSMNEG00000031494	CHD9	100	96.214	Macaca_nemestrina
ENSECAG00000011505	CHD9	100	96.040	ENSMLEG00000043219	CHD9	100	97.802	Mandrillus_leucophaeus
ENSECAG00000011505	CHD9	84	69.017	ENSMAMG00000003909	chd9	73	62.821	Mastacembelus_armatus
ENSECAG00000011505	CHD9	84	71.345	ENSMZEG00005006581	chd9	67	75.597	Maylandia_zebra
ENSECAG00000011505	CHD9	95	79.502	ENSMGAG00000004642	CHD9	72	80.804	Meleagris_gallopavo
ENSECAG00000011505	CHD9	100	96.107	ENSMICG00000016679	CHD9	100	97.802	Microcebus_murinus
ENSECAG00000011505	CHD9	60	74.150	ENSMMOG00000016406	chd9	74	63.003	Mola_mola
ENSECAG00000011505	CHD9	73	87.214	ENSMODG00000013142	-	99	92.453	Monodelphis_domestica
ENSECAG00000011505	CHD9	94	69.912	ENSMALG00000013306	chd9	73	62.506	Monopterus_albus
ENSECAG00000011505	CHD9	99	90.704	MGP_CAROLIEiJ_G0031364	Chd9	99	90.433	Mus_caroli
ENSECAG00000011505	CHD9	99	90.389	ENSMUSG00000056608	Chd9	99	95.260	Mus_musculus
ENSECAG00000011505	CHD9	99	88.773	MGP_PahariEiJ_G0022964	Chd9	99	88.504	Mus_pahari
ENSECAG00000011505	CHD9	99	90.527	MGP_SPRETEiJ_G0032483	Chd9	99	90.257	Mus_spretus
ENSECAG00000011505	CHD9	100	96.969	ENSMPUG00000003285	CHD9	100	96.969	Mustela_putorius_furo
ENSECAG00000011505	CHD9	100	94.764	ENSMLUG00000004456	CHD9	100	94.454	Myotis_lucifugus
ENSECAG00000011505	CHD9	91	71.139	ENSNBRG00000009423	chd9	67	75.462	Neolamprologus_brichardi
ENSECAG00000011505	CHD9	90	96.284	ENSNLEG00000001026	CHD9	100	96.284	Nomascus_leucogenys
ENSECAG00000011505	CHD9	74	98.496	ENSMEUG00000008222	-	84	96.078	Notamacropus_eugenii
ENSECAG00000011505	CHD9	85	97.143	ENSOPRG00000011168	CHD9	85	97.143	Ochotona_princeps
ENSECAG00000011505	CHD9	99	94.624	ENSODEG00000004466	CHD9	99	94.385	Octodon_degus
ENSECAG00000011505	CHD9	80	71.825	ENSONIG00000002816	chd9	87	63.085	Oreochromis_niloticus
ENSECAG00000011505	CHD9	100	86.855	ENSOANG00000013401	CHD9	100	86.855	Ornithorhynchus_anatinus
ENSECAG00000011505	CHD9	83	97.105	ENSOCUG00000001016	CHD9	99	97.105	Oryctolagus_cuniculus
ENSECAG00000011505	CHD9	80	70.330	ENSORLG00000013810	chd9	67	74.671	Oryzias_latipes
ENSECAG00000011505	CHD9	93	68.851	ENSORLG00020020665	chd9	75	63.220	Oryzias_latipes_hni
ENSECAG00000011505	CHD9	86	70.649	ENSORLG00015019126	chd9	81	62.494	Oryzias_latipes_hsok
ENSECAG00000011505	CHD9	100	95.009	ENSOGAG00000002110	CHD9	100	94.733	Otolemur_garnettii
ENSECAG00000011505	CHD9	100	96.284	ENSOARG00000017664	CHD9	100	96.284	Ovis_aries
ENSECAG00000011505	CHD9	83	95.813	ENSPPAG00000039388	-	100	95.813	Pan_paniscus
ENSECAG00000011505	CHD9	100	96.762	ENSPPRG00000004801	CHD9	100	99.267	Panthera_pardus
ENSECAG00000011505	CHD9	100	95.763	ENSPTIG00000021854	CHD9	100	95.763	Panthera_tigris_altaica
ENSECAG00000011505	CHD9	100	96.245	ENSPTRG00000008113	CHD9	100	98.168	Pan_troglodytes
ENSECAG00000011505	CHD9	100	96.074	ENSPANG00000019307	CHD9	100	97.802	Papio_anubis
ENSECAG00000011505	CHD9	97	62.894	ENSPKIG00000021876	chd9	68	76.941	Paramormyrops_kingsleyae
ENSECAG00000011505	CHD9	98	59.172	ENSPKIG00000025401	-	71	62.933	Paramormyrops_kingsleyae
ENSECAG00000011505	CHD9	64	84.811	ENSPSIG00000008099	CHD9	99	84.811	Pelodiscus_sinensis
ENSECAG00000011505	CHD9	59	57.437	ENSPMAG00000006035	-	72	67.739	Petromyzon_marinus
ENSECAG00000011505	CHD9	89	87.781	ENSPCIG00000017215	CHD9	97	90.156	Phascolarctos_cinereus
ENSECAG00000011505	CHD9	84	70.184	ENSPFOG00000015839	chd9	93	67.987	Poecilia_formosa
ENSECAG00000011505	CHD9	84	70.280	ENSPLAG00000011118	chd9	93	68.067	Poecilia_latipinna
ENSECAG00000011505	CHD9	84	70.731	ENSPMEG00000015106	chd9	70	71.293	Poecilia_mexicana
ENSECAG00000011505	CHD9	84	71.325	ENSPREG00000006473	chd9	95	69.814	Poecilia_reticulata
ENSECAG00000011505	CHD9	100	96.039	ENSPPYG00000007348	CHD9	100	96.039	Pongo_abelii
ENSECAG00000011505	CHD9	77	96.507	ENSPCAG00000007564	CHD9	86	96.507	Procavia_capensis
ENSECAG00000011505	CHD9	100	95.212	ENSPCOG00000028433	CHD9	100	98.901	Propithecus_coquereli
ENSECAG00000011505	CHD9	97	94.626	ENSPVAG00000015617	CHD9	98	94.549	Pteropus_vampyrus
ENSECAG00000011505	CHD9	91	70.697	ENSPNYG00000010947	chd9	66	75.462	Pundamilia_nyererei
ENSECAG00000011505	CHD9	86	68.006	ENSPNAG00000024141	chd9	68	75.642	Pygocentrus_nattereri
ENSECAG00000011505	CHD9	90	87.844	ENSRNOG00000049302	Chd9	100	90.413	Rattus_norvegicus
ENSECAG00000011505	CHD9	83	96.816	ENSRBIG00000035553	CHD9	100	97.802	Rhinopithecus_bieti
ENSECAG00000011505	CHD9	82	96.910	ENSRROG00000033278	CHD9	100	97.802	Rhinopithecus_roxellana
ENSECAG00000011505	CHD9	100	96.039	ENSSBOG00000030240	CHD9	100	97.070	Saimiri_boliviensis_boliviensis
ENSECAG00000011505	CHD9	99	88.093	ENSSHAG00000002719	CHD9	100	87.693	Sarcophilus_harrisii
ENSECAG00000011505	CHD9	97	63.014	ENSSFOG00015020209	chd9	99	62.644	Scleropages_formosus
ENSECAG00000011505	CHD9	84	67.780	ENSSFOG00015001327	chd9	67	75.726	Scleropages_formosus
ENSECAG00000011505	CHD9	84	69.343	ENSSMAG00000008953	chd9	99	62.669	Scophthalmus_maximus
ENSECAG00000011505	CHD9	79	70.576	ENSSDUG00000006139	chd9	65	76.245	Seriola_dumerili
ENSECAG00000011505	CHD9	80	70.861	ENSSLDG00000017818	chd9	65	76.306	Seriola_lalandi_dorsalis
ENSECAG00000011505	CHD9	97	94.181	ENSSARG00000010632	CHD9	97	94.284	Sorex_araneus
ENSECAG00000011505	CHD9	84	70.779	ENSSPAG00000021649	chd9	65	76.424	Stegastes_partitus
ENSECAG00000011505	CHD9	100	93.230	ENSSSCG00000033591	CHD9	100	93.230	Sus_scrofa
ENSECAG00000011505	CHD9	90	85.354	ENSTGUG00000007476	CHD9	100	85.583	Taeniopygia_guttata
ENSECAG00000011505	CHD9	60	76.056	ENSTRUG00000009125	chd9	73	62.865	Takifugu_rubripes
ENSECAG00000011505	CHD9	57	82.439	ENSTNIG00000003825	chd9	85	82.439	Tetraodon_nigroviridis
ENSECAG00000011505	CHD9	67	95.045	ENSTBEG00000016052	-	81	95.045	Tupaia_belangeri
ENSECAG00000011505	CHD9	90	96.245	ENSTTRG00000012674	CHD9	90	96.245	Tursiops_truncatus
ENSECAG00000011505	CHD9	64	95.396	ENSUAMG00000022706	CHD9	100	99.634	Ursus_americanus
ENSECAG00000011505	CHD9	90	94.845	ENSUMAG00000004043	CHD9	99	98.507	Ursus_maritimus
ENSECAG00000011505	CHD9	97	97.336	ENSVPAG00000001374	CHD9	97	97.336	Vicugna_pacos
ENSECAG00000011505	CHD9	100	97.106	ENSVVUG00000019435	CHD9	100	97.106	Vulpes_vulpes
ENSECAG00000011505	CHD9	99	73.395	ENSXETG00000000349	chd9	96	77.045	Xenopus_tropicalis
ENSECAG00000011505	CHD9	80	71.055	ENSXCOG00000012997	chd9	67	75.089	Xiphophorus_couchianus
ENSECAG00000011505	CHD9	84	70.598	ENSXMAG00000016192	chd9	97	61.765	Xiphophorus_maculatus