EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSECAG00000011597 (Gene tree)
Gene ID: 100066955
Gene Symbol: CLP1
Alias: -
Full Name: cleavage and polyadenylation factor I subunit 1
Gene Type: protein_coding
Species: Equus_caballus
Status: putative
Strand: Plus strand
Length: 8228 bases
Position: chr12:21242577-21250804
Accession: 16628
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSECAP00000034487	Clp1	PF06807.14	2.2e-30	1	1
ENSECAP00000009422	Clp1	PF06807.14	2.9e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSECAT00000011988	-	1503	-	ENSECAP00000009422	500 (aa)	-	F7BH56
ENSECAT00000040471	-	1712	-	ENSECAP00000034487	425 (aa)	XP_001497158	UPI0001796D2C

Gene Model

Click here to download ENSECAG00000011597's gene model file

Pathways

Pathway ID	Pathway Name	Source
ecb03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSECAG00000011597's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSECAG00000011597	CLP1	100	99.765	ENSG00000172409	CLP1	100	99.765	Homo_sapiens
ENSECAG00000011597	CLP1	98	77.123	ENSAPOG00000008242	clp1	99	75.862	Acanthochromis_polyacanthus
ENSECAG00000011597	CLP1	100	99.294	ENSAMEG00000014551	CLP1	100	99.076	Ailuropoda_melanoleuca
ENSECAG00000011597	CLP1	99	75.172	ENSACIG00000006310	clp1	98	75.172	Amphilophus_citrinellus
ENSECAG00000011597	CLP1	99	75.862	ENSAOCG00000010681	clp1	98	77.435	Amphiprion_ocellaris
ENSECAG00000011597	CLP1	98	77.123	ENSAPEG00000012165	clp1	99	77.123	Amphiprion_percula
ENSECAG00000011597	CLP1	99	76.566	ENSATEG00000012374	clp1	99	76.322	Anabas_testudineus
ENSECAG00000011597	CLP1	100	94.353	ENSACAG00000007139	CLP1	100	94.353	Anolis_carolinensis
ENSECAG00000011597	CLP1	100	99.765	ENSANAG00000034935	CLP1	100	99.765	Aotus_nancymaae
ENSECAG00000011597	CLP1	99	75.638	ENSACLG00000013573	clp1	99	75.402	Astatotilapia_calliptera
ENSECAG00000011597	CLP1	97	78.860	ENSAMXG00000014194	clp1	98	78.860	Astyanax_mexicanus
ENSECAG00000011597	CLP1	100	99.294	ENSBTAG00000006493	CLP1	100	99.294	Bos_taurus
ENSECAG00000011597	CLP1	96	47.962	WBGene00010304	clpf-1	97	47.962	Caenorhabditis_elegans
ENSECAG00000011597	CLP1	100	99.765	ENSCJAG00000008748	CLP1	100	99.765	Callithrix_jacchus
ENSECAG00000011597	CLP1	100	99.294	ENSCAFG00000007815	CLP1	100	99.294	Canis_familiaris
ENSECAG00000011597	CLP1	100	99.294	ENSCAFG00020000903	CLP1	100	99.294	Canis_lupus_dingo
ENSECAG00000011597	CLP1	100	99.059	ENSCHIG00000023497	CLP1	100	99.059	Capra_hircus
ENSECAG00000011597	CLP1	100	99.529	ENSTSYG00000006824	CLP1	100	99.536	Carlito_syrichta
ENSECAG00000011597	CLP1	100	99.059	ENSCAPG00000009703	CLP1	100	99.059	Cavia_aperea
ENSECAG00000011597	CLP1	98	99.519	ENSCPOG00000012554	CLP1	99	99.519	Cavia_porcellus
ENSECAG00000011597	CLP1	100	99.294	ENSCCAG00000031957	CLP1	100	99.294	Cebus_capucinus
ENSECAG00000011597	CLP1	100	99.765	ENSCATG00000044628	CLP1	100	99.765	Cercocebus_atys
ENSECAG00000011597	CLP1	100	99.529	ENSCLAG00000004094	CLP1	100	99.529	Chinchilla_lanigera
ENSECAG00000011597	CLP1	100	99.765	ENSCSAG00000005994	CLP1	100	99.765	Chlorocebus_sabaeus
ENSECAG00000011597	CLP1	100	94.353	ENSCPBG00000016843	CLP1	100	94.353	Chrysemys_picta_bellii
ENSECAG00000011597	CLP1	99	63.357	ENSCING00000003779	-	98	63.357	Ciona_intestinalis
ENSECAG00000011597	CLP1	99	63.270	ENSCSAVG00000003437	-	99	63.270	Ciona_savignyi
ENSECAG00000011597	CLP1	100	99.765	ENSCANG00000034335	CLP1	100	99.765	Colobus_angolensis_palliatus
ENSECAG00000011597	CLP1	100	98.588	ENSCGRG00001002227	CLP1	100	98.588	Cricetulus_griseus_chok1gshd
ENSECAG00000011597	CLP1	100	98.588	ENSCGRG00000004328	CLP1	100	98.588	Cricetulus_griseus_crigri
ENSECAG00000011597	CLP1	99	74.942	ENSCSEG00000008614	clp1	99	74.483	Cynoglossus_semilaevis
ENSECAG00000011597	CLP1	99	76.102	ENSCVAG00000020101	clp1	99	75.862	Cyprinodon_variegatus
ENSECAG00000011597	CLP1	97	79.952	ENSDARG00000063663	clp1	95	79.952	Danio_rerio
ENSECAG00000011597	CLP1	99	99.292	ENSDNOG00000042415	CLP1	91	99.072	Dasypus_novemcinctus
ENSECAG00000011597	CLP1	100	99.059	ENSDORG00000014685	Clp1	100	99.059	Dipodomys_ordii
ENSECAG00000011597	CLP1	96	56.553	FBgn0033842	cbc	97	56.553	Drosophila_melanogaster
ENSECAG00000011597	CLP1	100	99.529	ENSETEG00000003009	CLP1	100	99.529	Echinops_telfairi
ENSECAG00000011597	CLP1	97	72.155	ENSEBUG00000011648	clp1	97	72.155	Eptatretus_burgeri
ENSECAG00000011597	CLP1	100	100.000	ENSEASG00005002093	CLP1	100	100.000	Equus_asinus_asinus
ENSECAG00000011597	CLP1	100	98.353	ENSEEUG00000012771	CLP1	100	98.353	Erinaceus_europaeus
ENSECAG00000011597	CLP1	97	79.810	ENSELUG00000024048	clp1	99	75.938	Esox_lucius
ENSECAG00000011597	CLP1	100	99.529	ENSFCAG00000006633	CLP1	100	99.529	Felis_catus
ENSECAG00000011597	CLP1	100	92.706	ENSFALG00000011145	CLP1	100	92.706	Ficedula_albicollis
ENSECAG00000011597	CLP1	100	99.529	ENSFDAG00000000234	CLP1	100	99.529	Fukomys_damarensis
ENSECAG00000011597	CLP1	99	75.638	ENSFHEG00000014760	CLP1	99	75.402	Fundulus_heteroclitus
ENSECAG00000011597	CLP1	99	78.555	ENSGMOG00000019340	clp1	99	78.241	Gadus_morhua
ENSECAG00000011597	CLP1	100	93.412	ENSGALG00000007370	CLP1	100	93.412	Gallus_gallus
ENSECAG00000011597	CLP1	99	76.102	ENSGAFG00000003020	clp1	99	76.102	Gambusia_affinis
ENSECAG00000011597	CLP1	99	77.030	ENSGACG00000017832	clp1	99	76.552	Gasterosteus_aculeatus
ENSECAG00000011597	CLP1	100	94.353	ENSGAGG00000013279	CLP1	100	94.353	Gopherus_agassizii
ENSECAG00000011597	CLP1	100	99.765	ENSGGOG00000023006	CLP1	100	99.765	Gorilla_gorilla
ENSECAG00000011597	CLP1	99	75.638	ENSHBUG00000010436	clp1	99	75.402	Haplochromis_burtoni
ENSECAG00000011597	CLP1	100	99.529	ENSHGLG00000009914	CLP1	100	99.529	Heterocephalus_glaber_female
ENSECAG00000011597	CLP1	100	99.529	ENSHGLG00100006105	CLP1	100	99.529	Heterocephalus_glaber_male
ENSECAG00000011597	CLP1	99	77.241	ENSHCOG00000010072	clp1	99	77.241	Hippocampus_comes
ENSECAG00000011597	CLP1	97	79.286	ENSIPUG00000016238	clp1	94	79.097	Ictalurus_punctatus
ENSECAG00000011597	CLP1	100	99.529	ENSSTOG00000029257	CLP1	100	99.529	Ictidomys_tridecemlineatus
ENSECAG00000011597	CLP1	100	98.824	ENSJJAG00000023691	Clp1	100	98.824	Jaculus_jaculus
ENSECAG00000011597	CLP1	99	75.406	ENSKMAG00000011990	clp1	99	75.172	Kryptolebias_marmoratus
ENSECAG00000011597	CLP1	99	76.798	ENSLBEG00000010201	clp1	99	76.552	Labrus_bergylta
ENSECAG00000011597	CLP1	100	85.647	ENSLACG00000003160	CLP1	100	85.647	Latimeria_chalumnae
ENSECAG00000011597	CLP1	73	76.708	ENSLOCG00000008074	clp1	100	77.640	Lepisosteus_oculatus
ENSECAG00000011597	CLP1	100	99.294	ENSLAFG00000014907	CLP1	100	99.294	Loxodonta_africana
ENSECAG00000011597	CLP1	100	99.765	ENSMFAG00000046074	CLP1	100	99.765	Macaca_fascicularis
ENSECAG00000011597	CLP1	100	99.765	ENSMMUG00000038007	CLP1	100	99.536	Macaca_mulatta
ENSECAG00000011597	CLP1	100	99.765	ENSMNEG00000000259	CLP1	100	99.765	Macaca_nemestrina
ENSECAG00000011597	CLP1	100	99.765	ENSMLEG00000043556	CLP1	100	99.765	Mandrillus_leucophaeus
ENSECAG00000011597	CLP1	100	75.982	ENSMAMG00000002149	clp1	99	75.917	Mastacembelus_armatus
ENSECAG00000011597	CLP1	99	75.638	ENSMZEG00005002850	clp1	99	75.402	Maylandia_zebra
ENSECAG00000011597	CLP1	100	93.412	ENSMGAG00000009643	CLP1	100	93.412	Meleagris_gallopavo
ENSECAG00000011597	CLP1	100	97.882	ENSMAUG00000016261	Clp1	100	97.882	Mesocricetus_auratus
ENSECAG00000011597	CLP1	100	99.294	ENSMICG00000004895	CLP1	100	99.294	Microcebus_murinus
ENSECAG00000011597	CLP1	100	98.824	ENSMOCG00000005498	Clp1	100	98.824	Microtus_ochrogaster
ENSECAG00000011597	CLP1	98	78.538	ENSMMOG00000003229	clp1	98	77.189	Mola_mola
ENSECAG00000011597	CLP1	100	97.176	ENSMODG00000024148	-	100	97.176	Monodelphis_domestica
ENSECAG00000011597	CLP1	100	97.176	ENSMODG00000020107	-	100	97.176	Monodelphis_domestica
ENSECAG00000011597	CLP1	99	75.402	ENSMALG00000014239	clp1	99	75.402	Monopterus_albus
ENSECAG00000011597	CLP1	100	98.353	MGP_CAROLIEiJ_G0023726	Clp1	100	98.353	Mus_caroli
ENSECAG00000011597	CLP1	100	98.353	ENSMUSG00000027079	Clp1	100	98.353	Mus_musculus
ENSECAG00000011597	CLP1	100	98.118	MGP_PahariEiJ_G0025177	Clp1	100	98.118	Mus_pahari
ENSECAG00000011597	CLP1	100	98.353	MGP_SPRETEiJ_G0024646	Clp1	100	98.353	Mus_spretus
ENSECAG00000011597	CLP1	100	99.294	ENSMPUG00000000268	CLP1	100	99.294	Mustela_putorius_furo
ENSECAG00000011597	CLP1	100	98.824	ENSMLUG00000007904	CLP1	100	98.824	Myotis_lucifugus
ENSECAG00000011597	CLP1	100	99.059	ENSNGAG00000006165	Clp1	100	99.059	Nannospalax_galili
ENSECAG00000011597	CLP1	99	75.638	ENSNBRG00000005225	clp1	99	75.402	Neolamprologus_brichardi
ENSECAG00000011597	CLP1	82	96.970	ENSNLEG00000012809	-	100	96.970	Nomascus_leucogenys
ENSECAG00000011597	CLP1	100	97.176	ENSMEUG00000010949	CLP1	100	97.183	Notamacropus_eugenii
ENSECAG00000011597	CLP1	70	99.329	ENSOPRG00000007329	CLP1	100	99.329	Ochotona_princeps
ENSECAG00000011597	CLP1	100	99.529	ENSODEG00000011410	CLP1	100	99.529	Octodon_degus
ENSECAG00000011597	CLP1	99	75.406	ENSONIG00000005089	clp1	99	75.172	Oreochromis_niloticus
ENSECAG00000011597	CLP1	100	99.294	ENSOCUG00000007045	CLP1	100	99.294	Oryctolagus_cuniculus
ENSECAG00000011597	CLP1	99	74.713	ENSORLG00000003647	clp1	99	74.713	Oryzias_latipes
ENSECAG00000011597	CLP1	99	74.483	ENSORLG00020016676	clp1	99	74.483	Oryzias_latipes_hni
ENSECAG00000011597	CLP1	99	74.713	ENSORLG00015019484	clp1	99	74.713	Oryzias_latipes_hsok
ENSECAG00000011597	CLP1	99	75.406	ENSOMEG00000021303	clp1	99	75.172	Oryzias_melastigma
ENSECAG00000011597	CLP1	100	99.529	ENSOGAG00000004508	CLP1	100	99.529	Otolemur_garnettii
ENSECAG00000011597	CLP1	100	97.647	ENSOARG00000010145	CLP1	99	97.216	Ovis_aries
ENSECAG00000011597	CLP1	100	99.765	ENSPPAG00000041519	CLP1	100	99.765	Pan_paniscus
ENSECAG00000011597	CLP1	100	99.529	ENSPPRG00000006135	CLP1	100	99.529	Panthera_pardus
ENSECAG00000011597	CLP1	100	99.529	ENSPTIG00000015866	CLP1	100	99.529	Panthera_tigris_altaica
ENSECAG00000011597	CLP1	100	99.765	ENSPTRG00000047318	CLP1	100	99.765	Pan_troglodytes
ENSECAG00000011597	CLP1	100	99.765	ENSPANG00000017078	CLP1	99	99.537	Papio_anubis
ENSECAG00000011597	CLP1	97	80.630	ENSPKIG00000007697	clp1	99	78.291	Paramormyrops_kingsleyae
ENSECAG00000011597	CLP1	95	92.289	ENSPSIG00000005468	CLP1	100	92.289	Pelodiscus_sinensis
ENSECAG00000011597	CLP1	99	76.744	ENSPMGG00000012171	clp1	99	76.782	Periophthalmus_magnuspinnatus
ENSECAG00000011597	CLP1	100	98.824	ENSPEMG00000011213	-	100	98.824	Peromyscus_maniculatus_bairdii
ENSECAG00000011597	CLP1	100	76.291	ENSPMAG00000006707	clp1	100	76.291	Petromyzon_marinus
ENSECAG00000011597	CLP1	100	97.176	ENSPCIG00000011899	CLP1	99	97.176	Phascolarctos_cinereus
ENSECAG00000011597	CLP1	99	75.638	ENSPFOG00000008169	clp1	99	75.402	Poecilia_formosa
ENSECAG00000011597	CLP1	99	75.638	ENSPLAG00000022388	clp1	99	75.638	Poecilia_latipinna
ENSECAG00000011597	CLP1	99	75.638	ENSPMEG00000021088	clp1	99	75.638	Poecilia_mexicana
ENSECAG00000011597	CLP1	99	75.870	ENSPREG00000017802	clp1	99	75.632	Poecilia_reticulata
ENSECAG00000011597	CLP1	53	99.554	ENSPPYG00000003266	-	100	99.554	Pongo_abelii
ENSECAG00000011597	CLP1	100	99.294	ENSPCOG00000000360	CLP1	100	99.074	Propithecus_coquereli
ENSECAG00000011597	CLP1	100	99.294	ENSPVAG00000016270	CLP1	100	99.294	Pteropus_vampyrus
ENSECAG00000011597	CLP1	99	75.638	ENSPNYG00000017274	clp1	98	75.402	Pundamilia_nyererei
ENSECAG00000011597	CLP1	97	80.000	ENSPNAG00000026460	clp1	99	77.955	Pygocentrus_nattereri
ENSECAG00000011597	CLP1	100	98.353	ENSRNOG00000007416	Clp1	100	98.353	Rattus_norvegicus
ENSECAG00000011597	CLP1	100	99.765	ENSRBIG00000018191	CLP1	100	99.765	Rhinopithecus_bieti
ENSECAG00000011597	CLP1	100	99.765	ENSRROG00000039265	CLP1	100	99.765	Rhinopithecus_roxellana
ENSECAG00000011597	CLP1	96	79.803	ENSSBOG00000010558	-	93	79.803	Saimiri_boliviensis_boliviensis
ENSECAG00000011597	CLP1	100	99.765	ENSSBOG00000032517	-	100	99.765	Saimiri_boliviensis_boliviensis
ENSECAG00000011597	CLP1	100	97.412	ENSSHAG00000015695	CLP1	100	97.412	Sarcophilus_harrisii
ENSECAG00000011597	CLP1	97	79.294	ENSSFOG00015000628	clp1	96	79.294	Scleropages_formosus
ENSECAG00000011597	CLP1	99	75.638	ENSSMAG00000019423	clp1	98	75.172	Scophthalmus_maximus
ENSECAG00000011597	CLP1	99	76.552	ENSSDUG00000014495	clp1	99	76.552	Seriola_dumerili
ENSECAG00000011597	CLP1	99	76.322	ENSSLDG00000000937	clp1	99	76.322	Seriola_lalandi_dorsalis
ENSECAG00000011597	CLP1	52	99.103	ENSSARG00000002459	CLP1	100	99.103	Sorex_araneus
ENSECAG00000011597	CLP1	100	93.647	ENSSPUG00000016811	CLP1	100	93.647	Sphenodon_punctatus
ENSECAG00000011597	CLP1	99	75.402	ENSSPAG00000016052	clp1	99	75.402	Stegastes_partitus
ENSECAG00000011597	CLP1	100	99.294	ENSSSCG00000031442	CLP1	100	99.294	Sus_scrofa
ENSECAG00000011597	CLP1	100	92.471	ENSTGUG00000007002	CLP1	100	92.471	Taeniopygia_guttata
ENSECAG00000011597	CLP1	99	77.049	ENSTRUG00000012602	clp1	98	77.049	Takifugu_rubripes
ENSECAG00000011597	CLP1	99	76.581	ENSTNIG00000013125	clp1	98	76.581	Tetraodon_nigroviridis
ENSECAG00000011597	CLP1	100	98.118	ENSTBEG00000009975	CLP1	100	98.118	Tupaia_belangeri
ENSECAG00000011597	CLP1	100	98.824	ENSTTRG00000002096	CLP1	100	98.824	Tursiops_truncatus
ENSECAG00000011597	CLP1	100	99.294	ENSUAMG00000011388	CLP1	100	99.294	Ursus_americanus
ENSECAG00000011597	CLP1	100	99.294	ENSUMAG00000018317	CLP1	100	99.294	Ursus_maritimus
ENSECAG00000011597	CLP1	100	99.294	ENSVVUG00000017138	CLP1	98	99.074	Vulpes_vulpes
ENSECAG00000011597	CLP1	99	76.636	ENSXETG00000007088	clp1	95	78.657	Xenopus_tropicalis
ENSECAG00000011597	CLP1	99	75.870	ENSXCOG00000002287	clp1	99	75.632	Xiphophorus_couchianus
ENSECAG00000011597	CLP1	99	75.870	ENSXMAG00000009783	clp1	99	75.632	Xiphophorus_maculatus