EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSECAG00000011652 (Gene tree)
Gene ID
102149994
Gene Symbol
PABPN1
Alias
-
Full Name
poly(A) binding protein nuclear 1
Gene Type
protein_coding
Species
Equus_caballus
Status
putative
Strand
Plus strand
Length
39480 bases
Position
chr1:163222726-163262205
Accession
55926
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSECAP00000009457RRM_1PF00076.221.1e-1411
ENSECAP00000028626RRM_1PF00076.221.2e-1411
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSECAT00000052426-4912-ENSECAP00000028626317 (aa)--
ENSECAT00000012025-891-ENSECAP00000009457296 (aa)-F7BFS3
Gene Model
Click here to download ENSECAG00000011652's gene model file
Pathways
Pathway IDPathway NameSource
ecb03015mRNA surveillance pathwayKEGG
ecb05164Influenza AKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSECAG00000011652's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSECAG00000011652PABPN16946.222ENSECAG00000000378PABPN1L5158.993
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSECAG00000011652PABPN160100.000ENSG00000258643BCL2L2-PABPN15699.465Homo_sapiens
ENSECAG00000011652PABPN199100.000ENSG00000100836PABPN199100.000Homo_sapiens
ENSECAG00000011652PABPN18569.960ENSAPOG00000016425pabpn18581.373Acanthochromis_polyacanthus
ENSECAG00000011652PABPN160100.000ENSAMEG00000007048BCL2L2-PABPN19999.465Ailuropoda_melanoleuca
ENSECAG00000011652PABPN18569.020ENSACIG00000021744pabpn19381.325Amphilophus_citrinellus
ENSECAG00000011652PABPN18170.661ENSAOCG00000015805pabpn18581.373Amphiprion_ocellaris
ENSECAG00000011652PABPN18170.661ENSAPEG00000009623pabpn18581.373Amphiprion_percula
ENSECAG00000011652PABPN18171.074ENSATEG00000020531pabpn18581.863Anabas_testudineus
ENSECAG00000011652PABPN16289.130ENSACAG00000006185-7386.957Anolis_carolinensis
ENSECAG00000011652PABPN19990.476ENSANAG00000024513-9990.461Aotus_nancymaae
ENSECAG00000011652PABPN18568.750ENSACLG00000016374pabpn16780.303Astatotilapia_calliptera
ENSECAG00000011652PABPN18571.146ENSAMXG00000000452pabpn19383.133Astyanax_mexicanus
ENSECAG00000011652PABPN19999.320ENSBTAG00000006884PABPN19999.320Bos_taurus
ENSECAG00000011652PABPN18879.615ENSBTAG00000050594-8981.853Bos_taurus
ENSECAG00000011652PABPN19175.836ENSBTAG00000053753-7197.884Bos_taurus
ENSECAG00000011652PABPN199100.000ENSCJAG00000007960-9999.671Callithrix_jacchus
ENSECAG00000011652PABPN15698.193ENSCJAG00000004407-8897.727Callithrix_jacchus
ENSECAG00000011652PABPN19996.939ENSCAFG00000011482PABPN19996.711Canis_familiaris
ENSECAG00000011652PABPN199100.000ENSCAFG00020007298-9999.671Canis_lupus_dingo
ENSECAG00000011652PABPN199100.000ENSCAFG00020006651-9999.671Canis_lupus_dingo
ENSECAG00000011652PABPN19999.660ENSCHIG00000012184PABPN19999.342Capra_hircus
ENSECAG00000011652PABPN160100.000ENSTSYG00000033996BCL2L2-PABPN19999.432Carlito_syrichta
ENSECAG00000011652PABPN19998.299ENSCPOG00000025574PABPN19998.344Cavia_porcellus
ENSECAG00000011652PABPN199100.000ENSCCAG00000033954BCL2L2-PABPN19999.671Cebus_capucinus
ENSECAG00000011652PABPN199100.000ENSCATG00000038536BCL2L2-PABPN19999.671Cercocebus_atys
ENSECAG00000011652PABPN16578.756ENSCLAG00000012423PABPN16972.273Chinchilla_lanigera
ENSECAG00000011652PABPN19998.299ENSCSAG00000016036PABPN19998.026Chlorocebus_sabaeus
ENSECAG00000011652PABPN16587.565ENSCHOG00000004798BCL2L2-PABPN18787.685Choloepus_hoffmanni
ENSECAG00000011652PABPN15292.258ENSCPBG00000026060-9392.121Chrysemys_picta_bellii
ENSECAG00000011652PABPN16364.894ENSCING00000012468-8464.322Ciona_intestinalis
ENSECAG00000011652PABPN15662.424ENSCSAVG00000002001-9261.212Ciona_savignyi
ENSECAG00000011652PABPN160100.000ENSCANG00000009750BCL2L2-PABPN19999.432Colobus_angolensis_palliatus
ENSECAG00000011652PABPN19681.979ENSCANG00000030980-7383.251Colobus_angolensis_palliatus
ENSECAG00000011652PABPN19997.279ENSCGRG00001019696Pabpn19998.864Cricetulus_griseus_chok1gshd
ENSECAG00000011652PABPN15699.398ENSCGRG00000011102Pabpn19998.864Cricetulus_griseus_crigri
ENSECAG00000011652PABPN18370.161ENSCSEG00000008774pabpn18879.808Cynoglossus_semilaevis
ENSECAG00000011652PABPN18267.176ENSCVAG00000003152pabpn18580.392Cyprinodon_variegatus
ENSECAG00000011652PABPN18570.635ENSDARG00000045373pabpn18583.505Danio_rerio
ENSECAG00000011652PABPN199100.000ENSDNOG00000023682PABPN19999.671Dasypus_novemcinctus
ENSECAG00000011652PABPN19998.980ENSDORG00000028966-9999.007Dipodomys_ordii
ENSECAG00000011652PABPN16064.246FBgn0005648Pabp27964.835Drosophila_melanogaster
ENSECAG00000011652PABPN16179.235ENSEBUG00000002322pabpn18180.000Eptatretus_burgeri
ENSECAG00000011652PABPN199100.000ENSEASG00005011716PABPN199100.000Equus_asinus_asinus
ENSECAG00000011652PABPN19291.544ENSEEUG00000012973-7093.720Erinaceus_europaeus
ENSECAG00000011652PABPN18173.967ENSELUG00000022654pabpn18484.804Esox_lucius
ENSECAG00000011652PABPN199100.000ENSFCAG00000031922PABPN19999.671Felis_catus
ENSECAG00000011652PABPN15699.398ENSFDAG00000018381BCL2L2-PABPN19998.295Fukomys_damarensis
ENSECAG00000011652PABPN18169.421ENSFHEG00000007215pabpn18579.412Fundulus_heteroclitus
ENSECAG00000011652PABPN18570.472ENSGMOG00000003922pabpn16783.590Gadus_morhua
ENSECAG00000011652PABPN16189.175ENSGALG00000052930-7872.862Gallus_gallus
ENSECAG00000011652PABPN18170.370ENSGAFG00000017099pabpn18581.463Gambusia_affinis
ENSECAG00000011652PABPN18568.775ENSGACG00000002167pabpn18677.315Gasterosteus_aculeatus
ENSECAG00000011652PABPN199100.000ENSGGOG00000022683-9999.671Gorilla_gorilla
ENSECAG00000011652PABPN19281.752ENSGGOG00000025919-9484.615Gorilla_gorilla
ENSECAG00000011652PABPN19177.407ENSGGOG00000039675-7183.854Gorilla_gorilla
ENSECAG00000011652PABPN18171.074ENSHBUG00000019523pabpn18581.863Haplochromis_burtoni
ENSECAG00000011652PABPN19998.299ENSHGLG00000002927-9998.026Heterocephalus_glaber_female
ENSECAG00000011652PABPN15275.152ENSHGLG00000009842-9275.152Heterocephalus_glaber_female
ENSECAG00000011652PABPN19173.432ENSHGLG00000018588-7180.861Heterocephalus_glaber_female
ENSECAG00000011652PABPN19168.148ENSHGLG00100015565-7280.861Heterocephalus_glaber_male
ENSECAG00000011652PABPN16099.435ENSHGLG00100006673-9998.864Heterocephalus_glaber_male
ENSECAG00000011652PABPN15287.574ENSHGLG00100018935-9287.574Heterocephalus_glaber_male
ENSECAG00000011652PABPN18170.661ENSHCOG00000004655pabpn18481.683Hippocampus_comes
ENSECAG00000011652PABPN18167.355ENSIPUG00000000180-8580.612Ictalurus_punctatus
ENSECAG00000011652PABPN18171.488ENSIPUG00000008085PABPN18582.353Ictalurus_punctatus
ENSECAG00000011652PABPN156100.000ENSSTOG00000029847BCL2L2-PABPN19999.432Ictidomys_tridecemlineatus
ENSECAG00000011652PABPN156100.000ENSJJAG00000023507Gm205219999.432Jaculus_jaculus
ENSECAG00000011652PABPN16781.407ENSKMAG00000018748pabpn18580.976Kryptolebias_marmoratus
ENSECAG00000011652PABPN18570.356ENSLBEG00000027266pabpn18581.863Labrus_bergylta
ENSECAG00000011652PABPN16087.640ENSLACG00000000646pabpn17989.444Latimeria_chalumnae
ENSECAG00000011652PABPN18571.146ENSLOCG00000000796pabpn16984.103Lepisosteus_oculatus
ENSECAG00000011652PABPN16465.445ENSLOCG00000004694pabpn1l9464.878Lepisosteus_oculatus
ENSECAG00000011652PABPN160100.000ENSMFAG00000032183BCL2L2-PABPN19999.432Macaca_fascicularis
ENSECAG00000011652PABPN19991.156ENSMMUG00000014747BCL2L2-PABPN19999.306Macaca_mulatta
ENSECAG00000011652PABPN19677.700ENSMMUG00000048382-6782.673Macaca_mulatta
ENSECAG00000011652PABPN17282.051ENSMNEG00000035750-9792.086Macaca_nemestrina
ENSECAG00000011652PABPN199100.000ENSMNEG00000045065BCL2L2-PABPN19999.671Macaca_nemestrina
ENSECAG00000011652PABPN19673.239ENSMLEG00000034623-9789.928Mandrillus_leucophaeus
ENSECAG00000011652PABPN160100.000ENSMLEG00000043862BCL2L2-PABPN19999.432Mandrillus_leucophaeus
ENSECAG00000011652PABPN18570.751ENSMAMG00000007979pabpn16882.178Mastacembelus_armatus
ENSECAG00000011652PABPN18570.356ENSMZEG00005011904pabpn16782.564Maylandia_zebra
ENSECAG00000011652PABPN19897.232ENSMAUG00000007383Gm205219996.990Mesocricetus_auratus
ENSECAG00000011652PABPN19999.660ENSMICG00000010002BCL2L2-PABPN19999.342Microcebus_murinus
ENSECAG00000011652PABPN19996.939ENSMOCG00000018557Gm205219996.711Microtus_ochrogaster
ENSECAG00000011652PABPN18570.751ENSMMOG00000005405pabpn18582.353Mola_mola
ENSECAG00000011652PABPN19996.939ENSMODG00000004535-9997.020Monodelphis_domestica
ENSECAG00000011652PABPN18570.356ENSMALG00000019612pabpn16782.564Monopterus_albus
ENSECAG00000011652PABPN19996.259MGP_CAROLIEiJ_G0019277Pabpn19997.159Mus_caroli
ENSECAG00000011652PABPN16097.740MGP_CAROLIEiJ_G0019276Gm205215697.326Mus_caroli
ENSECAG00000011652PABPN19996.599ENSMUSG00000022194Pabpn19998.193Mus_musculus
ENSECAG00000011652PABPN16098.305ENSMUSG00000092232Gm205215697.861Mus_musculus
ENSECAG00000011652PABPN19996.599MGP_PahariEiJ_G0030295Pabpn110097.619Mus_pahari
ENSECAG00000011652PABPN16098.305MGP_PahariEiJ_G0030294Gm205215697.861Mus_pahari
ENSECAG00000011652PABPN19996.599MGP_SPRETEiJ_G0020166Pabpn19997.727Mus_spretus
ENSECAG00000011652PABPN16098.305MGP_SPRETEiJ_G0020165Gm205215697.861Mus_spretus
ENSECAG00000011652PABPN156100.000ENSMPUG00000006775-99100.000Mustela_putorius_furo
ENSECAG00000011652PABPN18989.313ENSMLUG00000012452-6992.417Myotis_lucifugus
ENSECAG00000011652PABPN19478.058ENSMLUG00000028677-7594.089Myotis_lucifugus
ENSECAG00000011652PABPN16097.740ENSMLUG00000003800-9997.326Myotis_lucifugus
ENSECAG00000011652PABPN160100.000ENSNGAG00000019529Gm205215699.465Nannospalax_galili
ENSECAG00000011652PABPN18570.356ENSNBRG00000023955pabpn19381.325Neolamprologus_brichardi
ENSECAG00000011652PABPN167100.000ENSNLEG00000015007-7499.522Nomascus_leucogenys
ENSECAG00000011652PABPN19675.524ENSNLEG00000030598-7881.340Nomascus_leucogenys
ENSECAG00000011652PABPN19998.299ENSODEG00000002083BCL2L2-PABPN19998.026Octodon_degus
ENSECAG00000011652PABPN15687.879ENSODEG00000011555-8886.061Octodon_degus
ENSECAG00000011652PABPN19181.413ENSODEG00000003739-7485.845Octodon_degus
ENSECAG00000011652PABPN18570.356ENSONIG00000008112pabpn16782.564Oreochromis_niloticus
ENSECAG00000011652PABPN19996.575ENSOCUG00000016174PABPN19996.358Oryctolagus_cuniculus
ENSECAG00000011652PABPN16782.828ENSORLG00000027900pabpn18580.000Oryzias_latipes
ENSECAG00000011652PABPN16384.492ENSORLG00020004681pabpn16782.673Oryzias_latipes_hni
ENSECAG00000011652PABPN16384.492ENSORLG00015000018pabpn18582.353Oryzias_latipes_hsok
ENSECAG00000011652PABPN16782.323ENSOMEG00000016618pabpn16883.684Oryzias_melastigma
ENSECAG00000011652PABPN199100.000ENSOGAG00000008710PABPN19999.671Otolemur_garnettii
ENSECAG00000011652PABPN160100.000ENSOARG00000019336BCL2L2-PABPN15299.465Ovis_aries
ENSECAG00000011652PABPN160100.000ENSPPAG00000028984BCL2L2-PABPN199100.000Pan_paniscus
ENSECAG00000011652PABPN15282.581ENSPPAG00000039421-9282.424Pan_paniscus
ENSECAG00000011652PABPN199100.000ENSPPRG00000010567PABPN19999.671Panthera_pardus
ENSECAG00000011652PABPN156100.000ENSPTIG00000001063BCL2L2-PABPN19999.432Panthera_tigris_altaica
ENSECAG00000011652PABPN19171.852ENSPTRG00000047273-9065.950Pan_troglodytes
ENSECAG00000011652PABPN199100.000ENSPTRG00000006167BCL2L29999.671Pan_troglodytes
ENSECAG00000011652PABPN199100.000ENSPANG00000021100BCL2L2-PABPN19999.671Papio_anubis
ENSECAG00000011652PABPN19678.169ENSPANG00000023326-9792.086Papio_anubis
ENSECAG00000011652PABPN16782.323ENSPKIG00000008144-6782.673Paramormyrops_kingsleyae
ENSECAG00000011652PABPN15470.807ENSPKIG00000008340pabpn1l8767.033Paramormyrops_kingsleyae
ENSECAG00000011652PABPN16782.828ENSPKIG00000018052pabpn18581.863Paramormyrops_kingsleyae
ENSECAG00000011652PABPN18569.565ENSPMGG00000022027pabpn16982.051Periophthalmus_magnuspinnatus
ENSECAG00000011652PABPN19997.279ENSPEMG00000008332Gm205219997.039Peromyscus_maniculatus_bairdii
ENSECAG00000011652PABPN15677.778ENSPMAG00000006212pabpn18376.119Petromyzon_marinus
ENSECAG00000011652PABPN19996.599ENSPCIG00000027751-9996.382Phascolarctos_cinereus
ENSECAG00000011652PABPN18267.213ENSPFOG00000010351pabpn18580.000Poecilia_formosa
ENSECAG00000011652PABPN18569.291ENSPLAG00000022696pabpn16781.633Poecilia_latipinna
ENSECAG00000011652PABPN17667.490ENSPMEG00000020856pabpn18580.000Poecilia_mexicana
ENSECAG00000011652PABPN18567.323ENSPREG00000011278pabpn18580.488Poecilia_reticulata
ENSECAG00000011652PABPN19994.218ENSPPYG00000005663PABPN19994.218Pongo_abelii
ENSECAG00000011652PABPN17185.308ENSPCAG00000005902PABPN17285.308Procavia_capensis
ENSECAG00000011652PABPN19999.660ENSPCOG00000028047BCL2L2-PABPN19999.342Propithecus_coquereli
ENSECAG00000011652PABPN19996.939ENSPVAG00000005270PABPN19996.711Pteropus_vampyrus
ENSECAG00000011652PABPN18171.074ENSPNYG00000013182pabpn18581.863Pundamilia_nyererei
ENSECAG00000011652PABPN18571.542ENSPNAG00000023526pabpn18583.333Pygocentrus_nattereri
ENSECAG00000011652PABPN15171.053ENSPNAG00000021666pabpn1l9263.959Pygocentrus_nattereri
ENSECAG00000011652PABPN19996.939ENSRNOG00000042195Pabpn19996.711Rattus_norvegicus
ENSECAG00000011652PABPN160100.000ENSRBIG00000040762BCL2L2-PABPN155100.000Rhinopithecus_bieti
ENSECAG00000011652PABPN18987.405ENSRBIG00000042811-9086.047Rhinopithecus_bieti
ENSECAG00000011652PABPN19783.333ENSRBIG00000039547-7485.222Rhinopithecus_bieti
ENSECAG00000011652PABPN19882.935ENSRROG00000040409-7485.222Rhinopithecus_roxellana
ENSECAG00000011652PABPN19181.716ENSRROG00000036409-6682.326Rhinopithecus_roxellana
ENSECAG00000011652PABPN160100.000ENSRROG00000045535BCL2L2-PABPN19999.432Rhinopithecus_roxellana
ENSECAG00000011652PABPN156100.000ENSSBOG00000026930BCL2L2-PABPN199100.000Saimiri_boliviensis_boliviensis
ENSECAG00000011652PABPN18564.822ENSSHAG00000007707-8774.757Sarcophilus_harrisii
ENSECAG00000011652PABPN17086.408ENSSHAG00000014841-8696.791Sarcophilus_harrisii
ENSECAG00000011652PABPN16662.755ENSSFOG00015015833pabpn1l8763.918Scleropages_formosus
ENSECAG00000011652PABPN16977.143ENSSFOG00015012565pabpn18980.882Scleropages_formosus
ENSECAG00000011652PABPN18170.248ENSSFOG00015014718pabpn18581.373Scleropages_formosus
ENSECAG00000011652PABPN18570.356ENSSMAG00000020157pabpn18581.863Scophthalmus_maximus
ENSECAG00000011652PABPN18570.356ENSSDUG00000020582pabpn16782.564Seriola_dumerili
ENSECAG00000011652PABPN18171.074ENSSLDG00000007118pabpn18581.863Seriola_lalandi_dorsalis
ENSECAG00000011652PABPN15290.909ENSSPUG00000018308-9390.909Sphenodon_punctatus
ENSECAG00000011652PABPN18570.356ENSSPAG00000021658pabpn18581.863Stegastes_partitus
ENSECAG00000011652PABPN16977.073ENSSSCG00000034805-7372.581Sus_scrofa
ENSECAG00000011652PABPN199100.000ENSSSCG00000002023PABPN199100.000Sus_scrofa
ENSECAG00000011652PABPN15554.878ENSSSCG00000038472-8753.704Sus_scrofa
ENSECAG00000011652PABPN18570.472ENSTRUG00000023664pabpn18582.353Takifugu_rubripes
ENSECAG00000011652PABPN16584.456ENSTNIG00000005369pabpn19380.000Tetraodon_nigroviridis
ENSECAG00000011652PABPN19999.320ENSUAMG00000024460PABPN19999.013Ursus_americanus
ENSECAG00000011652PABPN160100.000ENSUMAG00000014288BCL2L2-PABPN156100.000Ursus_maritimus
ENSECAG00000011652PABPN160100.000ENSVVUG00000019912BCL2L2-PABPN17597.906Vulpes_vulpes
ENSECAG00000011652PABPN16290.761ENSXETG00000014597pabpn16593.264Xenopus_tropicalis
ENSECAG00000011652PABPN15269.032ENSXCOG00000005158pabpn18880.667Xiphophorus_couchianus
ENSECAG00000011652PABPN18268.033ENSXMAG00000006196pabpn18580.976Xiphophorus_maculatus

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