EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSECAG00000011761 (Gene tree)
Gene ID: 100055799
Gene Symbol: CHD6
Alias: -
Full Name: chromodomain helicase DNA binding protein 6
Gene Type: protein_coding
Species: Equus_caballus
Status: putative
Strand: Minus strand
Length: 203234 bases
Position: chr22:32041662-32244895
Accession: 16488
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSECAP00000041778	ResIII	PF04851.15	9.5e-08	1	1
ENSECAP00000009937	ResIII	PF04851.15	9.7e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSECAT00000012578	-	10935	XM_023626581	ENSECAP00000009937	2717 (aa)	XP_023482349	F6T7D8
ENSECAT00000062821	-	10845	-	ENSECAP00000041778	2687 (aa)	-	-

Gene Model

Click here to download ENSECAG00000011761's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSECAG00000011761's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSECAG00000011761	CHD6	74	67.827	ENSECAG00000001445	CHD7	78	65.921
ENSECAG00000011761	CHD6	79	62.556	ENSECAG00000011505	CHD9	68	65.990
ENSECAG00000011761	CHD6	62	65.043	ENSECAG00000016102	CHD8	60	67.045

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSECAG00000011761	CHD6	100	92.828	ENSG00000124177	CHD6	99	100.000	Homo_sapiens
ENSECAG00000011761	CHD6	74	75.844	ENSAPOG00000013736	chd6	71	69.406	Acanthochromis_polyacanthus
ENSECAG00000011761	CHD6	100	93.633	ENSAMEG00000009496	CHD6	99	93.633	Ailuropoda_melanoleuca
ENSECAG00000011761	CHD6	74	75.830	ENSATEG00000005608	chd6	62	77.739	Anabas_testudineus
ENSECAG00000011761	CHD6	68	79.187	ENSAPLG00000015592	CHD6	100	72.973	Anas_platyrhynchos
ENSECAG00000011761	CHD6	99	67.325	ENSACAG00000006842	CHD6	99	68.192	Anolis_carolinensis
ENSECAG00000011761	CHD6	100	92.056	ENSANAG00000037548	CHD6	99	93.394	Aotus_nancymaae
ENSECAG00000011761	CHD6	76	74.661	ENSAMXG00000009576	chd6	77	69.933	Astyanax_mexicanus
ENSECAG00000011761	CHD6	100	89.890	ENSBTAG00000005733	CHD6	99	89.890	Bos_taurus
ENSECAG00000011761	CHD6	100	91.982	ENSCJAG00000017920	CHD6	99	93.211	Callithrix_jacchus
ENSECAG00000011761	CHD6	100	93.964	ENSCAFG00000009236	CHD6	99	93.964	Canis_familiaris
ENSECAG00000011761	CHD6	99	93.279	ENSCAFG00020012906	CHD6	99	98.501	Canis_lupus_dingo
ENSECAG00000011761	CHD6	100	89.816	ENSCHIG00000017606	CHD6	99	89.816	Capra_hircus
ENSECAG00000011761	CHD6	84	91.762	ENSTSYG00000014635	CHD6	100	91.762	Carlito_syrichta
ENSECAG00000011761	CHD6	100	90.983	ENSCPOG00000015641	CHD6	99	90.983	Cavia_porcellus
ENSECAG00000011761	CHD6	100	92.350	ENSCCAG00000036828	CHD6	99	93.394	Cebus_capucinus
ENSECAG00000011761	CHD6	100	92.497	ENSCATG00000039248	CHD6	99	93.394	Cercocebus_atys
ENSECAG00000011761	CHD6	100	91.113	ENSCLAG00000013743	CHD6	99	91.076	Chinchilla_lanigera
ENSECAG00000011761	CHD6	100	92.828	ENSCSAG00000013997	CHD6	99	92.828	Chlorocebus_sabaeus
ENSECAG00000011761	CHD6	92	90.231	ENSCHOG00000012647	CHD6	95	90.231	Choloepus_hoffmanni
ENSECAG00000011761	CHD6	99	73.241	ENSCPBG00000019382	CHD6	99	73.642	Chrysemys_picta_bellii
ENSECAG00000011761	CHD6	100	92.718	ENSCANG00000043435	CHD6	99	93.394	Colobus_angolensis_palliatus
ENSECAG00000011761	CHD6	100	88.958	ENSCGRG00001002694	Chd6	99	88.995	Cricetulus_griseus_chok1gshd
ENSECAG00000011761	CHD6	82	73.461	ENSDARG00000017244	chd6	79	73.461	Danio_rerio
ENSECAG00000011761	CHD6	99	91.110	ENSDNOG00000004176	CHD6	99	91.110	Dasypus_novemcinctus
ENSECAG00000011761	CHD6	99	98.708	ENSEASG00005023433	CHD6	99	98.708	Equus_asinus_asinus
ENSECAG00000011761	CHD6	70	79.664	ENSELUG00000012309	chd6	89	79.664	Esox_lucius
ENSECAG00000011761	CHD6	100	93.633	ENSFCAG00000003572	CHD6	99	93.633	Felis_catus
ENSECAG00000011761	CHD6	99	71.786	ENSFALG00000012563	CHD6	98	71.859	Ficedula_albicollis
ENSECAG00000011761	CHD6	99	91.181	ENSFDAG00000013791	CHD6	99	91.181	Fukomys_damarensis
ENSECAG00000011761	CHD6	73	69.478	ENSGMOG00000011715	chd6	84	70.597	Gadus_morhua
ENSECAG00000011761	CHD6	85	64.951	ENSGACG00000000037	chd6	95	64.587	Gasterosteus_aculeatus
ENSECAG00000011761	CHD6	100	92.902	ENSGGOG00000013123	CHD6	99	93.394	Gorilla_gorilla
ENSECAG00000011761	CHD6	77	72.567	ENSHBUG00000014701	chd6	70	68.665	Haplochromis_burtoni
ENSECAG00000011761	CHD6	100	91.464	ENSHGLG00000004548	CHD6	99	91.501	Heterocephalus_glaber_female
ENSECAG00000011761	CHD6	100	91.464	ENSHGLG00100006401	CHD6	99	91.501	Heterocephalus_glaber_male
ENSECAG00000011761	CHD6	77	77.404	ENSIPUG00000003692	chd6	75	77.149	Ictalurus_punctatus
ENSECAG00000011761	CHD6	100	91.866	ENSSTOG00000013382	CHD6	99	91.866	Ictidomys_tridecemlineatus
ENSECAG00000011761	CHD6	86	76.032	ENSLACG00000010881	CHD6	85	76.295	Latimeria_chalumnae
ENSECAG00000011761	CHD6	73	80.421	ENSLOCG00000007386	chd6	85	75.783	Lepisosteus_oculatus
ENSECAG00000011761	CHD6	100	92.347	ENSLAFG00000012144	CHD6	100	91.882	Loxodonta_africana
ENSECAG00000011761	CHD6	100	92.865	ENSMFAG00000032830	CHD6	99	93.394	Macaca_fascicularis
ENSECAG00000011761	CHD6	100	92.865	ENSMMUG00000020458	CHD6	99	93.394	Macaca_mulatta
ENSECAG00000011761	CHD6	100	92.865	ENSMNEG00000040847	CHD6	99	93.394	Macaca_nemestrina
ENSECAG00000011761	CHD6	99	92.804	ENSMLEG00000031965	CHD6	100	92.804	Mandrillus_leucophaeus
ENSECAG00000011761	CHD6	76	74.027	ENSMAMG00000013111	chd6	65	74.280	Mastacembelus_armatus
ENSECAG00000011761	CHD6	99	71.507	ENSMGAG00000001121	CHD6	100	72.259	Meleagris_gallopavo
ENSECAG00000011761	CHD6	99	92.578	ENSMICG00000016641	CHD6	99	92.661	Microcebus_murinus
ENSECAG00000011761	CHD6	89	80.834	ENSMODG00000000720	-	99	80.876	Monodelphis_domestica
ENSECAG00000011761	CHD6	100	87.449	MGP_CAROLIEiJ_G0024604	Chd6	99	94.421	Mus_caroli
ENSECAG00000011761	CHD6	100	87.670	ENSMUSG00000057133	Chd6	99	94.336	Mus_musculus
ENSECAG00000011761	CHD6	100	87.523	MGP_PahariEiJ_G0026048	Chd6	99	94.759	Mus_pahari
ENSECAG00000011761	CHD6	100	87.633	MGP_SPRETEiJ_G0025526	Chd6	99	94.421	Mus_spretus
ENSECAG00000011761	CHD6	100	92.401	ENSMPUG00000017695	CHD6	99	92.401	Mustela_putorius_furo
ENSECAG00000011761	CHD6	100	93.265	ENSMLUG00000016247	CHD6	99	93.265	Myotis_lucifugus
ENSECAG00000011761	CHD6	78	73.451	ENSNBRG00000013839	chd6	80	72.219	Neolamprologus_brichardi
ENSECAG00000011761	CHD6	99	91.390	ENSNLEG00000006496	CHD6	99	91.402	Nomascus_leucogenys
ENSECAG00000011761	CHD6	100	87.118	ENSOPRG00000013376	-	99	87.118	Ochotona_princeps
ENSECAG00000011761	CHD6	85	74.936	ENSONIG00000000393	chd6	82	74.936	Oreochromis_niloticus
ENSECAG00000011761	CHD6	100	70.765	ENSOANG00000014347	CHD6	99	70.802	Ornithorhynchus_anatinus
ENSECAG00000011761	CHD6	100	89.695	ENSOCUG00000012394	CHD6	100	89.695	Oryctolagus_cuniculus
ENSECAG00000011761	CHD6	79	70.379	ENSORLG00020021891	chd6	95	86.172	Oryzias_latipes_hni
ENSECAG00000011761	CHD6	99	90.751	ENSOGAG00000002427	CHD6	99	90.648	Otolemur_garnettii
ENSECAG00000011761	CHD6	100	87.500	ENSOARG00000002597	CHD6	100	87.500	Ovis_aries
ENSECAG00000011761	CHD6	100	93.743	ENSPPRG00000014756	CHD6	99	93.743	Panthera_pardus
ENSECAG00000011761	CHD6	100	93.633	ENSPTIG00000011094	CHD6	99	93.633	Panthera_tigris_altaica
ENSECAG00000011761	CHD6	100	92.902	ENSPTRG00000013504	CHD6	99	93.394	Pan_troglodytes
ENSECAG00000011761	CHD6	100	92.828	ENSPANG00000025554	CHD6	99	93.211	Papio_anubis
ENSECAG00000011761	CHD6	77	76.640	ENSPKIG00000005578	chd6	79	72.777	Paramormyrops_kingsleyae
ENSECAG00000011761	CHD6	77	76.491	ENSPMGG00000014877	chd6	83	76.562	Periophthalmus_magnuspinnatus
ENSECAG00000011761	CHD6	100	80.176	ENSPCIG00000028037	CHD6	99	80.580	Phascolarctos_cinereus
ENSECAG00000011761	CHD6	76	70.542	ENSPLAG00000003128	chd6	72	66.295	Poecilia_latipinna
ENSECAG00000011761	CHD6	70	73.013	ENSPREG00000022653	chd6	99	86.630	Poecilia_reticulata
ENSECAG00000011761	CHD6	100	93.088	ENSPPYG00000011016	CHD6	99	93.088	Pongo_abelii
ENSECAG00000011761	CHD6	99	92.225	ENSPCOG00000001089	CHD6	99	93.211	Propithecus_coquereli
ENSECAG00000011761	CHD6	78	75.211	ENSPNYG00000022516	chd6	80	73.764	Pundamilia_nyererei
ENSECAG00000011761	CHD6	76	75.298	ENSPNAG00000012825	chd6	74	73.921	Pygocentrus_nattereri
ENSECAG00000011761	CHD6	100	87.008	ENSRNOG00000016744	Chd6	99	87.228	Rattus_norvegicus
ENSECAG00000011761	CHD6	100	92.240	ENSSBOG00000022089	CHD6	99	93.394	Saimiri_boliviensis_boliviensis
ENSECAG00000011761	CHD6	99	79.904	ENSSHAG00000017072	CHD6	99	80.309	Sarcophilus_harrisii
ENSECAG00000011761	CHD6	78	76.187	ENSSFOG00015012920	chd6	81	72.893	Scleropages_formosus
ENSECAG00000011761	CHD6	58	100.000	ENSSARG00000002615	-	61	100.000	Sorex_araneus
ENSECAG00000011761	CHD6	100	92.715	ENSSSCG00000007360	CHD6	99	93.175	Sus_scrofa
ENSECAG00000011761	CHD6	97	73.306	ENSTGUG00000003179	CHD6	99	73.389	Taeniopygia_guttata
ENSECAG00000011761	CHD6	74	77.730	ENSTNIG00000017487	chd6	82	77.730	Tetraodon_nigroviridis
ENSECAG00000011761	CHD6	100	89.926	ENSTTRG00000013438	CHD6	99	89.926	Tursiops_truncatus
ENSECAG00000011761	CHD6	99	92.541	ENSUAMG00000024036	CHD6	99	92.546	Ursus_americanus
ENSECAG00000011761	CHD6	99	93.905	ENSUMAG00000002017	CHD6	99	93.909	Ursus_maritimus
ENSECAG00000011761	CHD6	94	87.870	ENSVPAG00000007941	CHD6	95	87.870	Vicugna_pacos
ENSECAG00000011761	CHD6	100	93.854	ENSVVUG00000029164	CHD6	99	93.854	Vulpes_vulpes
ENSECAG00000011761	CHD6	92	69.949	ENSXETG00000021445	chd6	91	69.764	Xenopus_tropicalis