EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSECAG00000011870 (Gene tree)
Gene ID: 100059063
Gene Symbol: PYM1
Alias: -
Full Name: PYM homolog 1%2C exon junction complex associated factor
Gene Type: protein_coding
Species: Equus_caballus
Status: putative
Strand: Minus strand
Length: 15167 bases
Position: chr6:74531793-74546959
Accession: 22066
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSECAP00000009678	Mago-bind	PF09282.10	1.1e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSECAT00000012269	-	1395	-	ENSECAP00000009678	203 (aa)	XP_005611336	F6ZQL4

Gene Model

Click here to download ENSECAG00000011870's gene model file

Pathways

Pathway ID	Pathway Name	Source
ecb03013	RNA transport	KEGG
ecb03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSECAG00000011870's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSECAG00000011870	PYM1	100	97.044	ENSG00000170473	PYM1	100	97.044	Homo_sapiens
ENSECAG00000011870	PYM1	99	57.477	ENSAPOG00000023045	pym1	94	57.561	Acanthochromis_polyacanthus
ENSECAG00000011870	PYM1	92	90.909	ENSAMEG00000003091	PYM1	93	90.426	Ailuropoda_melanoleuca
ENSECAG00000011870	PYM1	99	60.465	ENSACIG00000012769	pym1	94	60.194	Amphilophus_citrinellus
ENSECAG00000011870	PYM1	99	58.294	ENSAOCG00000021358	pym1	94	58.333	Amphiprion_ocellaris
ENSECAG00000011870	PYM1	99	58.294	ENSAPEG00000022679	pym1	94	58.333	Amphiprion_percula
ENSECAG00000011870	PYM1	99	56.338	ENSATEG00000024022	pym1	94	59.606	Anabas_testudineus
ENSECAG00000011870	PYM1	94	68.932	ENSACAG00000005714	PYM1	94	68.932	Anolis_carolinensis
ENSECAG00000011870	PYM1	94	95.812	ENSANAG00000036967	PYM1	94	95.812	Aotus_nancymaae
ENSECAG00000011870	PYM1	100	56.422	ENSAMXG00000007650	pym1	94	59.223	Astyanax_mexicanus
ENSECAG00000011870	PYM1	94	95.812	ENSBTAG00000031146	PYM1	94	95.812	Bos_taurus
ENSECAG00000011870	PYM1	94	95.812	ENSCJAG00000041077	PYM1	94	95.812	Callithrix_jacchus
ENSECAG00000011870	PYM1	100	97.044	ENSCAFG00000000076	PYM1	100	97.044	Canis_familiaris
ENSECAG00000011870	PYM1	100	97.044	ENSCAFG00020026099	PYM1	100	97.044	Canis_lupus_dingo
ENSECAG00000011870	PYM1	94	93.194	ENSCHIG00000026207	PYM1	94	93.194	Capra_hircus
ENSECAG00000011870	PYM1	94	93.194	ENSTSYG00000000787	PYM1	94	93.194	Carlito_syrichta
ENSECAG00000011870	PYM1	88	91.061	ENSCAPG00000010374	PYM1	94	91.061	Cavia_aperea
ENSECAG00000011870	PYM1	94	91.623	ENSCPOG00000031546	PYM1	94	91.623	Cavia_porcellus
ENSECAG00000011870	PYM1	100	96.552	ENSCCAG00000026187	PYM1	100	96.552	Cebus_capucinus
ENSECAG00000011870	PYM1	100	96.552	ENSCATG00000018801	PYM1	100	96.552	Cercocebus_atys
ENSECAG00000011870	PYM1	94	86.911	ENSCLAG00000007964	PYM1	94	86.911	Chinchilla_lanigera
ENSECAG00000011870	PYM1	89	96.111	ENSCSAG00000005291	PYM1	92	96.111	Chlorocebus_sabaeus
ENSECAG00000011870	PYM1	98	39.904	ENSCING00000006448	-	93	40.102	Ciona_intestinalis
ENSECAG00000011870	PYM1	98	36.574	ENSCSAVG00000009805	-	89	41.463	Ciona_savignyi
ENSECAG00000011870	PYM1	100	96.552	ENSCANG00000020338	-	100	96.552	Colobus_angolensis_palliatus
ENSECAG00000011870	PYM1	98	87.879	ENSCANG00000019757	-	86	92.632	Colobus_angolensis_palliatus
ENSECAG00000011870	PYM1	94	72.251	ENSCGRG00001004231	-	93	72.251	Cricetulus_griseus_chok1gshd
ENSECAG00000011870	PYM1	94	89.529	ENSCGRG00001018051	-	94	89.529	Cricetulus_griseus_chok1gshd
ENSECAG00000011870	PYM1	94	89.529	ENSCGRG00000012495	-	94	89.529	Cricetulus_griseus_crigri
ENSECAG00000011870	PYM1	94	72.251	ENSCGRG00000018933	-	93	72.251	Cricetulus_griseus_crigri
ENSECAG00000011870	PYM1	94	53.202	ENSCSEG00000021531	pym1	94	56.158	Cynoglossus_semilaevis
ENSECAG00000011870	PYM1	94	59.701	ENSCVAG00000017360	pym1	81	59.375	Cyprinodon_variegatus
ENSECAG00000011870	PYM1	99	54.630	ENSDARG00000046024	pym1	94	55.072	Danio_rerio
ENSECAG00000011870	PYM1	94	93.194	ENSDNOG00000048414	PYM1	86	93.194	Dasypus_novemcinctus
ENSECAG00000011870	PYM1	94	92.670	ENSDORG00000029448	Pym1	94	92.670	Dipodomys_ordii
ENSECAG00000011870	PYM1	93	35.149	FBgn0034918	Pym	88	32.663	Drosophila_melanogaster
ENSECAG00000011870	PYM1	89	86.667	ENSETEG00000004461	-	94	86.667	Echinops_telfairi
ENSECAG00000011870	PYM1	93	94.681	ENSEASG00005002271	PYM1	85	94.681	Equus_asinus_asinus
ENSECAG00000011870	PYM1	96	59.799	ENSELUG00000024250	pym1	94	59.091	Esox_lucius
ENSECAG00000011870	PYM1	94	95.812	ENSFCAG00000013967	PYM1	94	95.812	Felis_catus
ENSECAG00000011870	PYM1	94	92.147	ENSFDAG00000006314	PYM1	94	92.147	Fukomys_damarensis
ENSECAG00000011870	PYM1	94	58.416	ENSFHEG00000005884	pym1	94	58.416	Fundulus_heteroclitus
ENSECAG00000011870	PYM1	94	56.853	ENSGMOG00000007239	pym1	93	57.868	Gadus_morhua
ENSECAG00000011870	PYM1	94	70.769	ENSGALG00000046169	PYM1	94	70.769	Gallus_gallus
ENSECAG00000011870	PYM1	99	60.563	ENSGAFG00000003280	pym1	93	60.697	Gambusia_affinis
ENSECAG00000011870	PYM1	100	54.854	ENSGACG00000010703	pym1	94	55.897	Gasterosteus_aculeatus
ENSECAG00000011870	PYM1	92	64.356	ENSGAGG00000001973	PYM1	88	64.356	Gopherus_agassizii
ENSECAG00000011870	PYM1	100	97.044	ENSGGOG00000043246	PYM1	100	97.044	Gorilla_gorilla
ENSECAG00000011870	PYM1	94	59.606	ENSHBUG00000012719	pym1	94	61.084	Haplochromis_burtoni
ENSECAG00000011870	PYM1	94	93.194	ENSHGLG00000017155	PYM1	94	93.194	Heterocephalus_glaber_female
ENSECAG00000011870	PYM1	94	93.194	ENSHGLG00100015341	PYM1	94	93.194	Heterocephalus_glaber_male
ENSECAG00000011870	PYM1	99	58.095	ENSHCOG00000007987	pym1	80	58.163	Hippocampus_comes
ENSECAG00000011870	PYM1	100	58.065	ENSIPUG00000005975	wibga	94	58.049	Ictalurus_punctatus
ENSECAG00000011870	PYM1	100	96.552	ENSSTOG00000014206	PYM1	100	96.552	Ictidomys_tridecemlineatus
ENSECAG00000011870	PYM1	94	89.529	ENSJJAG00000013338	Pym1	94	89.529	Jaculus_jaculus
ENSECAG00000011870	PYM1	99	56.306	ENSKMAG00000006351	pym1	95	55.399	Kryptolebias_marmoratus
ENSECAG00000011870	PYM1	99	59.135	ENSLBEG00000015707	pym1	94	58.794	Labrus_bergylta
ENSECAG00000011870	PYM1	89	62.827	ENSLACG00000014398	PYM1	90	61.658	Latimeria_chalumnae
ENSECAG00000011870	PYM1	94	93.717	ENSLAFG00000002369	PYM1	94	93.717	Loxodonta_africana
ENSECAG00000011870	PYM1	100	96.552	ENSMFAG00000003048	PYM1	100	96.552	Macaca_fascicularis
ENSECAG00000011870	PYM1	100	96.552	ENSMMUG00000011002	PYM1	100	96.552	Macaca_mulatta
ENSECAG00000011870	PYM1	100	96.552	ENSMNEG00000034677	PYM1	100	96.552	Macaca_nemestrina
ENSECAG00000011870	PYM1	100	96.552	ENSMLEG00000007971	PYM1	100	96.552	Mandrillus_leucophaeus
ENSECAG00000011870	PYM1	99	55.909	ENSMAMG00000001588	pym1	94	58.095	Mastacembelus_armatus
ENSECAG00000011870	PYM1	94	59.113	ENSMZEG00005026458	pym1	94	60.591	Maylandia_zebra
ENSECAG00000011870	PYM1	94	89.005	ENSMAUG00000007318	Pym1	94	89.005	Mesocricetus_auratus
ENSECAG00000011870	PYM1	94	95.288	ENSMICG00000032962	PYM1	94	95.288	Microcebus_murinus
ENSECAG00000011870	PYM1	94	87.958	ENSMOCG00000010208	Pym1	94	87.958	Microtus_ochrogaster
ENSECAG00000011870	PYM1	99	57.767	ENSMMOG00000009301	pym1	92	60.825	Mola_mola
ENSECAG00000011870	PYM1	99	58.095	ENSMALG00000013496	pym1	94	57.711	Monopterus_albus
ENSECAG00000011870	PYM1	94	89.529	MGP_CAROLIEiJ_G0015953	Pym1	94	89.529	Mus_caroli
ENSECAG00000011870	PYM1	94	90.576	ENSMUSG00000064030	Pym1	94	90.576	Mus_musculus
ENSECAG00000011870	PYM1	94	88.482	MGP_PahariEiJ_G0031131	Pym1	94	88.482	Mus_pahari
ENSECAG00000011870	PYM1	94	90.576	MGP_SPRETEiJ_G0016778	Pym1	94	90.576	Mus_spretus
ENSECAG00000011870	PYM1	100	97.537	ENSMPUG00000000931	PYM1	100	97.537	Mustela_putorius_furo
ENSECAG00000011870	PYM1	94	87.435	ENSMLUG00000003586	PYM1	94	87.435	Myotis_lucifugus
ENSECAG00000011870	PYM1	89	91.111	ENSNGAG00000019207	Pym1	87	91.111	Nannospalax_galili
ENSECAG00000011870	PYM1	99	60.377	ENSNBRG00000006951	pym1	94	61.084	Neolamprologus_brichardi
ENSECAG00000011870	PYM1	100	97.044	ENSNLEG00000017588	PYM1	100	97.044	Nomascus_leucogenys
ENSECAG00000011870	PYM1	88	80.337	ENSMEUG00000001017	PYM1	93	80.226	Notamacropus_eugenii
ENSECAG00000011870	PYM1	89	90.000	ENSOPRG00000007797	PYM1	88	90.000	Ochotona_princeps
ENSECAG00000011870	PYM1	94	93.194	ENSODEG00000004289	PYM1	94	93.194	Octodon_degus
ENSECAG00000011870	PYM1	94	58.738	ENSONIG00000016740	pym1	94	60.194	Oreochromis_niloticus
ENSECAG00000011870	PYM1	89	91.111	ENSOCUG00000025969	PYM1	81	91.111	Oryctolagus_cuniculus
ENSECAG00000011870	PYM1	99	61.722	ENSORLG00000030592	pym1	94	61.307	Oryzias_latipes
ENSECAG00000011870	PYM1	99	61.137	ENSORLG00020011264	pym1	94	61.194	Oryzias_latipes_hni
ENSECAG00000011870	PYM1	99	62.500	ENSORLG00015005287	pym1	94	62.121	Oryzias_latipes_hsok
ENSECAG00000011870	PYM1	99	62.136	ENSOMEG00000022250	pym1	94	61.421	Oryzias_melastigma
ENSECAG00000011870	PYM1	91	93.478	ENSOGAG00000007038	PYM1	90	93.478	Otolemur_garnettii
ENSECAG00000011870	PYM1	94	93.717	ENSOARG00000010856	PYM1	94	93.717	Ovis_aries
ENSECAG00000011870	PYM1	100	97.044	ENSPPAG00000043630	PYM1	100	97.044	Pan_paniscus
ENSECAG00000011870	PYM1	94	94.241	ENSPPRG00000013243	PYM1	94	94.241	Panthera_pardus
ENSECAG00000011870	PYM1	94	93.717	ENSPTIG00000017380	PYM1	94	93.717	Panthera_tigris_altaica
ENSECAG00000011870	PYM1	100	97.044	ENSPTRG00000005067	PYM1	100	97.044	Pan_troglodytes
ENSECAG00000011870	PYM1	94	95.812	ENSPANG00000009562	PYM1	94	95.812	Papio_anubis
ENSECAG00000011870	PYM1	100	62.264	ENSPKIG00000006301	pym1	94	61.500	Paramormyrops_kingsleyae
ENSECAG00000011870	PYM1	89	66.146	ENSPSIG00000003043	PYM1	90	66.146	Pelodiscus_sinensis
ENSECAG00000011870	PYM1	100	62.201	ENSPMGG00000023161	pym1	94	62.437	Periophthalmus_magnuspinnatus
ENSECAG00000011870	PYM1	94	87.958	ENSPEMG00000009372	Pym1	94	87.958	Peromyscus_maniculatus_bairdii
ENSECAG00000011870	PYM1	92	80.108	ENSPCIG00000024658	PYM1	91	79.787	Phascolarctos_cinereus
ENSECAG00000011870	PYM1	99	61.611	ENSPFOG00000008193	pym1	93	61.809	Poecilia_formosa
ENSECAG00000011870	PYM1	99	60.664	ENSPLAG00000009228	pym1	93	60.804	Poecilia_latipinna
ENSECAG00000011870	PYM1	99	60.664	ENSPMEG00000001505	pym1	93	60.804	Poecilia_mexicana
ENSECAG00000011870	PYM1	89	95.556	ENSPPYG00000004635	PYM1	92	95.556	Pongo_abelii
ENSECAG00000011870	PYM1	94	95.288	ENSPCOG00000019706	PYM1	94	95.288	Propithecus_coquereli
ENSECAG00000011870	PYM1	95	97.396	ENSPVAG00000011437	PYM1	98	97.396	Pteropus_vampyrus
ENSECAG00000011870	PYM1	94	60.099	ENSPNYG00000012871	pym1	94	59.606	Pundamilia_nyererei
ENSECAG00000011870	PYM1	99	59.174	ENSPNAG00000018833	pym1	94	59.809	Pygocentrus_nattereri
ENSECAG00000011870	PYM1	92	67.380	ENSRNOG00000049415	AABR07055413.1	91	62.234	Rattus_norvegicus
ENSECAG00000011870	PYM1	94	84.375	ENSRNOG00000058130	Pym1	94	84.375	Rattus_norvegicus
ENSECAG00000011870	PYM1	94	91.623	ENSRBIG00000033362	PYM1	94	91.623	Rhinopithecus_bieti
ENSECAG00000011870	PYM1	100	96.552	ENSRROG00000043620	PYM1	100	96.552	Rhinopithecus_roxellana
ENSECAG00000011870	PYM1	100	96.552	ENSSBOG00000029393	PYM1	100	96.552	Saimiri_boliviensis_boliviensis
ENSECAG00000011870	PYM1	93	81.481	ENSSHAG00000008280	PYM1	93	81.481	Sarcophilus_harrisii
ENSECAG00000011870	PYM1	93	65.979	ENSSFOG00015021475	pym1	94	65.482	Scleropages_formosus
ENSECAG00000011870	PYM1	99	58.294	ENSSMAG00000020912	pym1	94	59.901	Scophthalmus_maximus
ENSECAG00000011870	PYM1	99	55.349	ENSSDUG00000001807	pym1	94	57.895	Seriola_dumerili
ENSECAG00000011870	PYM1	99	59.512	ENSSLDG00000013730	pym1	94	61.307	Seriola_lalandi_dorsalis
ENSECAG00000011870	PYM1	89	89.444	ENSSARG00000009569	PYM1	94	89.444	Sorex_araneus
ENSECAG00000011870	PYM1	89	63.158	ENSSPUG00000015059	PYM1	90	63.158	Sphenodon_punctatus
ENSECAG00000011870	PYM1	99	57.477	ENSSPAG00000020100	pym1	94	58.252	Stegastes_partitus
ENSECAG00000011870	PYM1	94	94.764	ENSSSCG00000040825	PYM1	94	94.764	Sus_scrofa
ENSECAG00000011870	PYM1	99	58.654	ENSTRUG00000021367	pym1	93	59.694	Takifugu_rubripes
ENSECAG00000011870	PYM1	99	52.727	ENSTNIG00000012534	pym1	92	59.067	Tetraodon_nigroviridis
ENSECAG00000011870	PYM1	89	87.222	ENSTBEG00000004208	PYM1	94	87.222	Tupaia_belangeri
ENSECAG00000011870	PYM1	95	96.354	ENSTTRG00000014971	PYM1	98	96.354	Tursiops_truncatus
ENSECAG00000011870	PYM1	94	94.764	ENSUAMG00000014521	PYM1	94	94.764	Ursus_americanus
ENSECAG00000011870	PYM1	91	92.391	ENSUMAG00000016241	PYM1	84	91.892	Ursus_maritimus
ENSECAG00000011870	PYM1	100	96.059	ENSVVUG00000022749	PYM1	100	96.059	Vulpes_vulpes
ENSECAG00000011870	PYM1	94	63.077	ENSXETG00000021850	pym1	94	63.959	Xenopus_tropicalis
ENSECAG00000011870	PYM1	99	60.664	ENSXMAG00000011649	pym1	93	60.804	Xiphophorus_maculatus