EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSECAG00000012019 (Gene tree)
Gene ID: 100066679
Gene Symbol: SETX
Alias: -
Full Name: senataxin
Gene Type: protein_coding
Species: Equus_caballus
Status: putative
Strand: Minus strand
Length: 76977 bases
Position: chr25:35313009-35389985
Accession: 22881
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSECAP00000025229	ResIII	PF04851.15	7.2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSECAT00000061148	-	8510	-	ENSECAP00000035586	2680 (aa)	-	UPI000C9DC8B6
ENSECAT00000041522	-	8000	-	ENSECAP00000043577	2625 (aa)	-	-
ENSECAT00000012673	-	8063	-	ENSECAP00000010009	2646 (aa)	-	F6QHG0
ENSECAT00000040791	-	8275	XM_023629200	ENSECAP00000044200	2680 (aa)	XP_023484968	UPI000C9DC8B6
ENSECAT00000038847	-	7981	-	ENSECAP00000026543	2647 (aa)	-	-
ENSECAT00000033171	-	7558	-	ENSECAP00000025229	2448 (aa)	-	-
ENSECAT00000032593	-	8945	XM_023629200	ENSECAP00000032435	2680 (aa)	XP_023484968	UPI000C9DC8B6

Gene Model

Click here to download ENSECAG00000012019's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSECAG00000012019's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSECAG00000012019	SETX	99	82.658	ENSG00000107290	SETX	91	82.658	Homo_sapiens
ENSECAG00000012019	SETX	75	42.448	ENSAMXG00000014406	-	83	42.130	Astyanax_mexicanus
ENSECAG00000012019	SETX	99	81.814	ENSCJAG00000018245	SETX	91	81.814	Callithrix_jacchus
ENSECAG00000012019	SETX	99	74.765	ENSCPOG00000001492	SETX	91	74.519	Cavia_porcellus
ENSECAG00000012019	SETX	96	77.693	ENSCLAG00000012582	SETX	90	77.693	Chinchilla_lanigera
ENSECAG00000012019	SETX	71	94.658	ENSETEG00000008111	-	65	94.658	Echinops_telfairi
ENSECAG00000012019	SETX	73	43.087	ENSELUG00000022536	-	73	42.677	Esox_lucius
ENSECAG00000012019	SETX	99	83.313	ENSFCAG00000007102	SETX	91	83.272	Felis_catus
ENSECAG00000012019	SETX	99	81.022	ENSGGOG00000027664	SETX	91	81.022	Gorilla_gorilla
ENSECAG00000012019	SETX	69	46.338	ENSIPUG00000006685	setx	76	44.620	Ictalurus_punctatus
ENSECAG00000012019	SETX	86	54.864	ENSLOCG00000004264	SETX	86	55.024	Lepisosteus_oculatus
ENSECAG00000012019	SETX	52	83.605	ENSLAFG00000017327	-	100	83.605	Loxodonta_africana
ENSECAG00000012019	SETX	99	69.901	ENSMOCG00000000848	Setx	91	70.470	Microtus_ochrogaster
ENSECAG00000012019	SETX	99	74.000	MGP_PahariEiJ_G0024821	Setx	91	73.510	Mus_pahari
ENSECAG00000012019	SETX	99	81.209	ENSNLEG00000012839	SETX	93	81.168	Nomascus_leucogenys
ENSECAG00000012019	SETX	97	74.703	ENSOCUG00000005616	SETX	88	74.703	Oryctolagus_cuniculus
ENSECAG00000012019	SETX	99	83.299	ENSOGAG00000013387	SETX	90	83.299	Otolemur_garnettii
ENSECAG00000012019	SETX	99	82.331	ENSPPAG00000004108	SETX	91	82.290	Pan_paniscus
ENSECAG00000012019	SETX	99	82.863	ENSPPRG00000012867	SETX	91	82.822	Panthera_pardus
ENSECAG00000012019	SETX	99	82.536	ENSPTIG00000021101	SETX	91	82.495	Panthera_tigris_altaica
ENSECAG00000012019	SETX	99	82.209	ENSPTRG00000021495	SETX	91	82.209	Pan_troglodytes
ENSECAG00000012019	SETX	80	49.007	ENSPKIG00000025162	SETX	79	49.172	Paramormyrops_kingsleyae
ENSECAG00000012019	SETX	64	93.103	ENSSARG00000002336	-	63	93.103	Sorex_araneus
ENSECAG00000012019	SETX	88	68.053	ENSSPUG00000016332	SETX	81	71.770	Sphenodon_punctatus
ENSECAG00000012019	SETX	97	88.210	ENSSSCG00000005724	SETX	91	88.210	Sus_scrofa
ENSECAG00000012019	SETX	85	72.833	ENSTGUG00000005117	SETX	84	72.667	Taeniopygia_guttata
ENSECAG00000012019	SETX	85	64.393	ENSXETG00000006254	setx	87	64.238	Xenopus_tropicalis