EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSECAG00000012023 (Gene tree)
Gene ID: 100071373
Gene Symbol: -
Alias: -
Full Name: pre-mRNA-splicing factor SYF2
Gene Type: protein_coding
Species: Equus_caballus
Status: putative
Strand: Plus strand
Length: 6211 bases
Position: chr2:30098436-30104646
Accession: 100071373
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSECAP00000009907	SYF2	PF08231.12	2.7e-54	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSECAT00000012538	-	897	-	ENSECAP00000009907	245 (aa)	XP_001501167	F6TEU9

Gene Model

Click here to download ENSECAG00000012023's gene model file

Pathways

Pathway ID	Pathway Name	Source
ecb03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSECAG00000012023's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSECAG00000012023	-	96	97.881	ENSECAG00000010440	-	99	97.881

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSECAG00000012023	-	100	92.245	ENSG00000117614	SYF2	100	92.245	Homo_sapiens
ENSECAG00000012023	-	91	84.234	ENSAPOG00000001174	syf2	96	82.684	Acanthochromis_polyacanthus
ENSECAG00000012023	-	80	97.436	ENSAMEG00000010134	-	100	97.436	Ailuropoda_melanoleuca
ENSECAG00000012023	-	98	94.167	ENSAMEG00000010115	-	99	94.167	Ailuropoda_melanoleuca
ENSECAG00000012023	-	93	79.399	ENSACIG00000023688	syf2	93	79.399	Amphilophus_citrinellus
ENSECAG00000012023	-	87	81.776	ENSAOCG00000010912	syf2	66	81.776	Amphiprion_ocellaris
ENSECAG00000012023	-	94	83.117	ENSAOCG00000022046	syf2	97	83.117	Amphiprion_ocellaris
ENSECAG00000012023	-	94	83.117	ENSAPEG00000018858	syf2	88	83.117	Amphiprion_percula
ENSECAG00000012023	-	89	83.410	ENSATEG00000007745	syf2	96	80.952	Anabas_testudineus
ENSECAG00000012023	-	81	89.447	ENSAPLG00000016435	SYF2	99	89.000	Anas_platyrhynchos
ENSECAG00000012023	-	83	85.784	ENSACAG00000013653	-	100	85.784	Anolis_carolinensis
ENSECAG00000012023	-	68	76.048	ENSACAG00000026777	-	94	76.433	Anolis_carolinensis
ENSECAG00000012023	-	100	93.061	ENSANAG00000032473	SYF2	100	93.469	Aotus_nancymaae
ENSECAG00000012023	-	91	81.081	ENSACLG00000019916	syf2	95	79.913	Astatotilapia_calliptera
ENSECAG00000012023	-	96	78.903	ENSAMXG00000004051	syf2	99	78.903	Astyanax_mexicanus
ENSECAG00000012023	-	100	95.918	ENSBTAG00000001651	SYF2	99	97.447	Bos_taurus
ENSECAG00000012023	-	85	50.952	WBGene00019402	syf-2	99	47.210	Caenorhabditis_elegans
ENSECAG00000012023	-	100	93.061	ENSCJAG00000046570	SYF2	100	93.061	Callithrix_jacchus
ENSECAG00000012023	-	100	93.496	ENSCAFG00000012895	-	100	93.496	Canis_familiaris
ENSECAG00000012023	-	93	86.266	ENSCAFG00000030331	-	99	86.266	Canis_familiaris
ENSECAG00000012023	-	100	93.496	ENSCAFG00020021091	-	100	93.496	Canis_lupus_dingo
ENSECAG00000012023	-	74	88.462	ENSCAFG00020021094	-	83	96.795	Canis_lupus_dingo
ENSECAG00000012023	-	100	95.102	ENSCHIG00000020874	SYF2	99	96.653	Capra_hircus
ENSECAG00000012023	-	100	93.061	ENSTSYG00000005114	SYF2	100	93.061	Carlito_syrichta
ENSECAG00000012023	-	81	98.485	ENSCAPG00000010006	SYF2	100	98.485	Cavia_aperea
ENSECAG00000012023	-	100	93.061	ENSCPOG00000005326	SYF2	100	93.061	Cavia_porcellus
ENSECAG00000012023	-	100	93.469	ENSCCAG00000022459	SYF2	100	93.878	Cebus_capucinus
ENSECAG00000012023	-	100	91.020	ENSCATG00000026917	SYF2	100	91.020	Cercocebus_atys
ENSECAG00000012023	-	100	93.878	ENSCLAG00000008474	SYF2	100	93.878	Chinchilla_lanigera
ENSECAG00000012023	-	100	91.020	ENSCSAG00000000948	SYF2	100	91.020	Chlorocebus_sabaeus
ENSECAG00000012023	-	73	78.333	ENSCHOG00000005273	-	99	78.333	Choloepus_hoffmanni
ENSECAG00000012023	-	91	90.179	ENSCPBG00000025073	SYF2	97	86.307	Chrysemys_picta_bellii
ENSECAG00000012023	-	86	53.521	ENSCING00000003017	-	89	53.052	Ciona_intestinalis
ENSECAG00000012023	-	86	51.174	ENSCSAVG00000006627	-	97	51.174	Ciona_savignyi
ENSECAG00000012023	-	100	78.367	ENSCANG00000037322	SYF2	100	78.367	Colobus_angolensis_palliatus
ENSECAG00000012023	-	100	91.837	ENSCGRG00001020733	Syf2	100	91.837	Cricetulus_griseus_chok1gshd
ENSECAG00000012023	-	81	95.980	ENSCGRG00000005095	Syf2	96	95.980	Cricetulus_griseus_crigri
ENSECAG00000012023	-	89	78.440	ENSCSEG00000000117	syf2	96	75.214	Cynoglossus_semilaevis
ENSECAG00000012023	-	90	81.900	ENSCVAG00000019543	syf2	100	77.824	Cyprinodon_variegatus
ENSECAG00000012023	-	91	82.511	ENSDARG00000004706	syf2	94	82.511	Danio_rerio
ENSECAG00000012023	-	100	94.694	ENSDNOG00000047605	SYF2	100	94.694	Dasypus_novemcinctus
ENSECAG00000012023	-	100	93.061	ENSDORG00000001274	Syf2	100	93.061	Dipodomys_ordii
ENSECAG00000012023	-	89	57.727	FBgn0033556	CG12343	97	57.727	Drosophila_melanogaster
ENSECAG00000012023	-	88	79.630	ENSETEG00000015729	SYF2	100	77.056	Echinops_telfairi
ENSECAG00000012023	-	80	60.406	ENSEBUG00000015402	syf2	95	60.406	Eptatretus_burgeri
ENSECAG00000012023	-	100	85.306	ENSEASG00005004232	-	100	85.306	Equus_asinus_asinus
ENSECAG00000012023	-	100	95.918	ENSEASG00005004224	-	100	95.918	Equus_asinus_asinus
ENSECAG00000012023	-	75	82.609	ENSEEUG00000015084	SYF2	100	82.609	Erinaceus_europaeus
ENSECAG00000012023	-	90	85.520	ENSELUG00000003465	syf2	93	85.520	Esox_lucius
ENSECAG00000012023	-	100	93.089	ENSFCAG00000010324	-	85	93.089	Felis_catus
ENSECAG00000012023	-	100	94.309	ENSFCAG00000043095	-	100	94.309	Felis_catus
ENSECAG00000012023	-	83	85.784	ENSFALG00000000460	SYF2	91	82.969	Ficedula_albicollis
ENSECAG00000012023	-	100	93.061	ENSFDAG00000008310	SYF2	100	93.061	Fukomys_damarensis
ENSECAG00000012023	-	91	66.964	ENSFHEG00000007238	syf2	99	66.964	Fundulus_heteroclitus
ENSECAG00000012023	-	88	84.651	ENSGMOG00000019138	syf2	96	84.651	Gadus_morhua
ENSECAG00000012023	-	93	88.546	ENSGALG00000013639	SYF2	100	82.937	Gallus_gallus
ENSECAG00000012023	-	95	77.586	ENSGAFG00000019435	syf2	96	77.586	Gambusia_affinis
ENSECAG00000012023	-	88	83.721	ENSGACG00000007305	syf2	96	80.172	Gasterosteus_aculeatus
ENSECAG00000012023	-	91	90.625	ENSGAGG00000010670	SYF2	97	86.722	Gopherus_agassizii
ENSECAG00000012023	-	100	92.653	ENSGGOG00000012796	SYF2	100	92.653	Gorilla_gorilla
ENSECAG00000012023	-	96	78.723	ENSHBUG00000020477	syf2	99	78.723	Haplochromis_burtoni
ENSECAG00000012023	-	91	84.375	ENSHGLG00000004304	-	96	81.304	Heterocephalus_glaber_female
ENSECAG00000012023	-	100	92.653	ENSHGLG00000014393	SYF2	100	92.653	Heterocephalus_glaber_female
ENSECAG00000012023	-	100	92.653	ENSHGLG00100014722	SYF2	100	92.653	Heterocephalus_glaber_male
ENSECAG00000012023	-	100	76.735	ENSHCOG00000012904	syf2	78	76.735	Hippocampus_comes
ENSECAG00000012023	-	100	78.776	ENSIPUG00000019859	syf2	100	78.776	Ictalurus_punctatus
ENSECAG00000012023	-	60	97.945	ENSSTOG00000023984	SYF2	100	97.945	Ictidomys_tridecemlineatus
ENSECAG00000012023	-	81	97.990	ENSJJAG00000013301	Syf2	94	97.990	Jaculus_jaculus
ENSECAG00000012023	-	99	76.860	ENSKMAG00000013856	syf2	99	76.860	Kryptolebias_marmoratus
ENSECAG00000012023	-	89	83.562	ENSLBEG00000014425	syf2	99	77.686	Labrus_bergylta
ENSECAG00000012023	-	89	86.697	ENSLACG00000012064	SYF2	92	86.697	Latimeria_chalumnae
ENSECAG00000012023	-	91	84.305	ENSLOCG00000002728	syf2	89	84.305	Lepisosteus_oculatus
ENSECAG00000012023	-	100	93.878	ENSLAFG00000023150	-	100	93.878	Loxodonta_africana
ENSECAG00000012023	-	75	65.761	ENSLAFG00000030814	-	100	65.761	Loxodonta_africana
ENSECAG00000012023	-	100	91.429	ENSMFAG00000041831	SYF2	100	91.429	Macaca_fascicularis
ENSECAG00000012023	-	100	91.429	ENSMMUG00000002968	SYF2	100	91.429	Macaca_mulatta
ENSECAG00000012023	-	100	91.429	ENSMNEG00000030180	SYF2	100	91.429	Macaca_nemestrina
ENSECAG00000012023	-	100	91.020	ENSMLEG00000030248	SYF2	100	91.020	Mandrillus_leucophaeus
ENSECAG00000012023	-	89	82.028	ENSMAMG00000010403	syf2	98	75.918	Mastacembelus_armatus
ENSECAG00000012023	-	99	77.273	ENSMZEG00005006429	syf2	99	77.273	Maylandia_zebra
ENSECAG00000012023	-	81	89.447	ENSMGAG00000002019	SYF2	100	89.447	Meleagris_gallopavo
ENSECAG00000012023	-	100	91.429	ENSMAUG00000018974	Syf2	100	91.429	Mesocricetus_auratus
ENSECAG00000012023	-	81	97.990	ENSMICG00000016191	SYF2	100	97.990	Microcebus_murinus
ENSECAG00000012023	-	100	92.245	ENSMOCG00000022938	Syf2	100	92.245	Microtus_ochrogaster
ENSECAG00000012023	-	96	76.596	ENSMMOG00000002396	syf2	97	76.596	Mola_mola
ENSECAG00000012023	-	93	88.210	ENSMODG00000013951	-	100	88.210	Monodelphis_domestica
ENSECAG00000012023	-	99	77.366	ENSMALG00000010706	syf2	99	77.778	Monopterus_albus
ENSECAG00000012023	-	100	91.837	MGP_CAROLIEiJ_G0026633	Syf2	100	91.837	Mus_caroli
ENSECAG00000012023	-	100	91.837	ENSMUSG00000028821	Syf2	100	91.837	Mus_musculus
ENSECAG00000012023	-	100	91.837	MGP_PahariEiJ_G0028966	Syf2	100	91.837	Mus_pahari
ENSECAG00000012023	-	100	91.837	MGP_SPRETEiJ_G0027613	Syf2	100	91.837	Mus_spretus
ENSECAG00000012023	-	100	92.276	ENSMPUG00000015801	-	100	92.276	Mustela_putorius_furo
ENSECAG00000012023	-	100	94.309	ENSMPUG00000015802	-	100	94.309	Mustela_putorius_furo
ENSECAG00000012023	-	96	95.726	ENSMLUG00000001885	SYF2	96	95.726	Myotis_lucifugus
ENSECAG00000012023	-	100	93.117	ENSNGAG00000007912	Syf2	100	93.117	Nannospalax_galili
ENSECAG00000012023	-	98	70.954	ENSNBRG00000010720	syf2	99	70.954	Neolamprologus_brichardi
ENSECAG00000012023	-	100	92.653	ENSNLEG00000035185	SYF2	100	92.653	Nomascus_leucogenys
ENSECAG00000012023	-	100	91.837	ENSOPRG00000012870	SYF2	100	91.837	Ochotona_princeps
ENSECAG00000012023	-	93	95.633	ENSODEG00000017664	-	96	95.633	Octodon_degus
ENSECAG00000012023	-	100	82.449	ENSODEG00000014338	-	99	83.898	Octodon_degus
ENSECAG00000012023	-	91	81.081	ENSONIG00000008213	syf2	95	79.913	Oreochromis_niloticus
ENSECAG00000012023	-	82	91.089	ENSOANG00000009552	SYF2	100	91.089	Ornithorhynchus_anatinus
ENSECAG00000012023	-	100	94.694	ENSOCUG00000013050	SYF2	100	94.694	Oryctolagus_cuniculus
ENSECAG00000012023	-	91	81.982	ENSORLG00000028820	syf2	95	81.982	Oryzias_latipes
ENSECAG00000012023	-	96	78.571	ENSORLG00020018333	syf2	100	78.571	Oryzias_latipes_hni
ENSECAG00000012023	-	96	78.151	ENSORLG00015014665	syf2	100	78.151	Oryzias_latipes_hsok
ENSECAG00000012023	-	91	82.883	ENSOMEG00000013911	syf2	93	82.883	Oryzias_melastigma
ENSECAG00000012023	-	100	93.061	ENSOGAG00000009962	SYF2	100	93.061	Otolemur_garnettii
ENSECAG00000012023	-	100	95.142	ENSOARG00000006348	-	100	95.142	Ovis_aries
ENSECAG00000012023	-	80	67.179	ENSOARG00000006269	-	100	67.179	Ovis_aries
ENSECAG00000012023	-	100	92.653	ENSPPAG00000036579	SYF2	100	92.653	Pan_paniscus
ENSECAG00000012023	-	100	94.309	ENSPPRG00000001651	-	100	94.309	Panthera_pardus
ENSECAG00000012023	-	100	93.496	ENSPPRG00000001638	-	100	93.496	Panthera_pardus
ENSECAG00000012023	-	100	94.309	ENSPTIG00000007036	-	100	94.309	Panthera_tigris_altaica
ENSECAG00000012023	-	91	97.758	ENSPTIG00000005711	-	81	97.758	Panthera_tigris_altaica
ENSECAG00000012023	-	100	92.653	ENSPTRG00000000352	SYF2	100	92.653	Pan_troglodytes
ENSECAG00000012023	-	100	91.429	ENSPANG00000008139	SYF2	100	91.429	Papio_anubis
ENSECAG00000012023	-	100	78.776	ENSPKIG00000008130	syf2	100	78.776	Paramormyrops_kingsleyae
ENSECAG00000012023	-	99	82.143	ENSPSIG00000011816	SYF2	97	82.800	Pelodiscus_sinensis
ENSECAG00000012023	-	100	75.918	ENSPMGG00000008755	syf2	93	75.918	Periophthalmus_magnuspinnatus
ENSECAG00000012023	-	100	92.245	ENSPEMG00000008283	Syf2	100	92.245	Peromyscus_maniculatus_bairdii
ENSECAG00000012023	-	92	93.778	ENSPCIG00000014235	SYF2	92	93.478	Phascolarctos_cinereus
ENSECAG00000012023	-	100	74.694	ENSPFOG00000004116	syf2	99	75.102	Poecilia_formosa
ENSECAG00000012023	-	95	76.891	ENSPLAG00000006691	syf2	100	78.541	Poecilia_latipinna
ENSECAG00000012023	-	100	73.061	ENSPMEG00000011684	syf2	98	75.431	Poecilia_mexicana
ENSECAG00000012023	-	88	81.481	ENSPREG00000003009	syf2	100	75.102	Poecilia_reticulata
ENSECAG00000012023	-	100	93.878	ENSPPYG00000001713	SYF2	100	93.878	Pongo_abelii
ENSECAG00000012023	-	99	62.551	ENSPCOG00000027011	SYF2	99	62.140	Propithecus_coquereli
ENSECAG00000012023	-	100	82.449	ENSPVAG00000005841	SYF2	100	82.449	Pteropus_vampyrus
ENSECAG00000012023	-	91	81.081	ENSPNYG00000004979	syf2	95	79.913	Pundamilia_nyererei
ENSECAG00000012023	-	96	81.435	ENSPNAG00000015570	syf2	99	81.435	Pygocentrus_nattereri
ENSECAG00000012023	-	100	91.837	ENSRNOG00000060597	Syf2	100	91.837	Rattus_norvegicus
ENSECAG00000012023	-	100	88.980	ENSRBIG00000042970	SYF2	100	88.980	Rhinopithecus_bieti
ENSECAG00000012023	-	100	91.429	ENSRROG00000001347	SYF2	100	91.429	Rhinopithecus_roxellana
ENSECAG00000012023	-	88	99.074	ENSSBOG00000020184	SYF2	100	92.653	Saimiri_boliviensis_boliviensis
ENSECAG00000012023	-	84	93.689	ENSSHAG00000007152	-	100	93.689	Sarcophilus_harrisii
ENSECAG00000012023	-	93	92.070	ENSSHAG00000015630	-	92	91.739	Sarcophilus_harrisii
ENSECAG00000012023	-	92	82.667	ENSSFOG00015023647	syf2	95	82.667	Scleropages_formosus
ENSECAG00000012023	-	94	80.000	ENSSMAG00000009867	syf2	95	80.000	Scophthalmus_maximus
ENSECAG00000012023	-	89	83.486	ENSSDUG00000013072	syf2	92	83.486	Seriola_dumerili
ENSECAG00000012023	-	89	83.486	ENSSLDG00000012677	syf2	92	83.486	Seriola_lalandi_dorsalis
ENSECAG00000012023	-	100	74.694	ENSSARG00000012889	SYF2	100	74.694	Sorex_araneus
ENSECAG00000012023	-	95	87.069	ENSSPUG00000005251	SYF2	92	87.069	Sphenodon_punctatus
ENSECAG00000012023	-	96	78.992	ENSSPAG00000009626	syf2	100	78.992	Stegastes_partitus
ENSECAG00000012023	-	100	94.694	ENSSSCG00000037481	SYF2	100	94.694	Sus_scrofa
ENSECAG00000012023	-	61	60.265	ENSTGUG00000001126	SYF2	85	59.770	Taeniopygia_guttata
ENSECAG00000012023	-	100	74.694	ENSTRUG00000001499	syf2	91	79.039	Takifugu_rubripes
ENSECAG00000012023	-	91	79.372	ENSTNIG00000016912	syf2	100	79.372	Tetraodon_nigroviridis
ENSECAG00000012023	-	100	70.612	ENSTBEG00000017370	SYF2	99	70.204	Tupaia_belangeri
ENSECAG00000012023	-	100	95.102	ENSTTRG00000003550	SYF2	100	95.102	Tursiops_truncatus
ENSECAG00000012023	-	100	93.089	ENSUAMG00000002897	SYF2	100	93.089	Ursus_americanus
ENSECAG00000012023	-	100	93.496	ENSUMAG00000013108	SYF2	100	93.496	Ursus_maritimus
ENSECAG00000012023	-	100	93.878	ENSVPAG00000005705	SYF2	100	93.878	Vicugna_pacos
ENSECAG00000012023	-	100	90.323	ENSVVUG00000027181	-	100	90.323	Vulpes_vulpes
ENSECAG00000012023	-	100	93.496	ENSVVUG00000027175	-	100	93.496	Vulpes_vulpes
ENSECAG00000012023	-	93	85.526	ENSXETG00000022797	syf2	92	85.526	Xenopus_tropicalis
ENSECAG00000012023	-	88	81.395	ENSXMAG00000022698	syf2	96	77.155	Xiphophorus_maculatus