EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSECAG00000012085 (Gene tree)
Gene ID: 100056310
Gene Symbol: SWT1
Alias: -
Full Name: SWT1%2C RNA endoribonuclease homolog
Gene Type: protein_coding
Species: Equus_caballus
Status: putative
Strand: Plus strand
Length: 85535 bases
Position: chr5:19159024-19244558
Accession: 23788
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSECAP00000022902	PIN_4	PF13638.6	8.6e-21	1	1
ENSECAP00000009871	PIN_4	PF13638.6	8.6e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSECAT00000012494	-	2466	-	ENSECAP00000009871	821 (aa)	-	F6VEL2
ENSECAT00000028943	-	2475	-	ENSECAP00000022902	824 (aa)	-	F6PVB5

Gene Model

Click here to download ENSECAG00000012085's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSECAG00000012085's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSECAG00000012085	SWT1	99	77.671	ENSG00000116668	SWT1	92	77.671	Homo_sapiens
ENSECAG00000012085	SWT1	63	31.716	ENSAPOG00000014897	-	58	31.716	Acanthochromis_polyacanthus
ENSECAG00000012085	SWT1	99	80.336	ENSAMEG00000013585	SWT1	92	80.361	Ailuropoda_melanoleuca
ENSECAG00000012085	SWT1	63	32.756	ENSAOCG00000013932	swt1	58	32.756	Amphiprion_ocellaris
ENSECAG00000012085	SWT1	63	32.582	ENSAPEG00000009613	-	58	32.582	Amphiprion_percula
ENSECAG00000012085	SWT1	63	32.696	ENSATEG00000018946	swt1	57	32.696	Anabas_testudineus
ENSECAG00000012085	SWT1	70	52.588	ENSAPLG00000008607	SWT1	100	47.368	Anas_platyrhynchos
ENSECAG00000012085	SWT1	67	46.274	ENSACAG00000002276	SWT1	67	46.274	Anolis_carolinensis
ENSECAG00000012085	SWT1	99	78.271	ENSANAG00000027068	SWT1	92	78.271	Aotus_nancymaae
ENSECAG00000012085	SWT1	67	37.500	ENSAMXG00000010971	swt1	59	37.500	Astyanax_mexicanus
ENSECAG00000012085	SWT1	68	76.034	ENSBTAG00000004492	SWT1	99	78.959	Bos_taurus
ENSECAG00000012085	SWT1	99	77.218	ENSCJAG00000005544	SWT1	92	77.229	Callithrix_jacchus
ENSECAG00000012085	SWT1	99	79.736	ENSCAFG00000013543	SWT1	90	79.759	Canis_familiaris
ENSECAG00000012085	SWT1	99	80.430	ENSCAFG00020015648	SWT1	97	80.241	Canis_lupus_dingo
ENSECAG00000012085	SWT1	98	79.589	ENSCHIG00000023511	SWT1	100	83.756	Capra_hircus
ENSECAG00000012085	SWT1	99	78.417	ENSTSYG00000010470	SWT1	92	78.434	Carlito_syrichta
ENSECAG00000012085	SWT1	91	74.482	ENSCPOG00000014251	SWT1	95	74.482	Cavia_porcellus
ENSECAG00000012085	SWT1	99	78.631	ENSCCAG00000033926	SWT1	92	78.631	Cebus_capucinus
ENSECAG00000012085	SWT1	99	78.504	ENSCATG00000042210	SWT1	99	82.173	Cercocebus_atys
ENSECAG00000012085	SWT1	98	74.910	ENSCLAG00000013959	SWT1	92	74.910	Chinchilla_lanigera
ENSECAG00000012085	SWT1	98	77.938	ENSCSAG00000012895	SWT1	92	77.938	Chlorocebus_sabaeus
ENSECAG00000012085	SWT1	97	46.172	ENSCPBG00000015691	SWT1	92	47.406	Chrysemys_picta_bellii
ENSECAG00000012085	SWT1	99	78.614	ENSCANG00000032207	SWT1	99	82.082	Colobus_angolensis_palliatus
ENSECAG00000012085	SWT1	99	72.782	ENSCGRG00001022955	Swt1	92	70.983	Cricetulus_griseus_chok1gshd
ENSECAG00000012085	SWT1	99	72.782	ENSCGRG00000010224	Swt1	92	72.782	Cricetulus_griseus_crigri
ENSECAG00000012085	SWT1	59	47.826	ENSCSEG00000017352	swt1	62	47.826	Cynoglossus_semilaevis
ENSECAG00000012085	SWT1	65	37.390	ENSDARG00000094010	swt1	57	37.390	Danio_rerio
ENSECAG00000012085	SWT1	88	73.747	ENSDNOG00000005254	SWT1	91	73.873	Dasypus_novemcinctus
ENSECAG00000012085	SWT1	97	74.421	ENSDORG00000010531	Swt1	96	74.909	Dipodomys_ordii
ENSECAG00000012085	SWT1	100	91.617	ENSEASG00005005530	SWT1	99	91.617	Equus_asinus_asinus
ENSECAG00000012085	SWT1	86	89.655	ENSEEUG00000003664	SWT1	82	89.655	Erinaceus_europaeus
ENSECAG00000012085	SWT1	67	35.225	ENSELUG00000020565	swt1	58	35.559	Esox_lucius
ENSECAG00000012085	SWT1	99	80.072	ENSFCAG00000011286	SWT1	92	80.072	Felis_catus
ENSECAG00000012085	SWT1	69	51.946	ENSFALG00000003206	SWT1	89	44.195	Ficedula_albicollis
ENSECAG00000012085	SWT1	99	74.251	ENSFDAG00000007569	SWT1	92	74.251	Fukomys_damarensis
ENSECAG00000012085	SWT1	65	53.654	ENSGALG00000034230	SWT1	65	53.086	Gallus_gallus
ENSECAG00000012085	SWT1	96	45.690	ENSGAGG00000025050	SWT1	99	55.959	Gopherus_agassizii
ENSECAG00000012085	SWT1	61	81.298	ENSGGOG00000041167	-	95	81.298	Gorilla_gorilla
ENSECAG00000012085	SWT1	97	76.792	ENSHGLG00000006542	SWT1	95	76.792	Heterocephalus_glaber_female
ENSECAG00000012085	SWT1	97	76.792	ENSHGLG00100014408	SWT1	92	76.792	Heterocephalus_glaber_male
ENSECAG00000012085	SWT1	78	33.088	ENSIPUG00000009113	-	69	33.141	Ictalurus_punctatus
ENSECAG00000012085	SWT1	99	75.208	ENSSTOG00000010356	SWT1	93	75.208	Ictidomys_tridecemlineatus
ENSECAG00000012085	SWT1	98	69.481	ENSJJAG00000015927	Swt1	94	69.481	Jaculus_jaculus
ENSECAG00000012085	SWT1	64	32.423	ENSKMAG00000012533	swt1	58	32.423	Kryptolebias_marmoratus
ENSECAG00000012085	SWT1	63	33.042	ENSLBEG00000020663	-	57	33.042	Labrus_bergylta
ENSECAG00000012085	SWT1	80	45.533	ENSLACG00000009194	SWT1	99	45.533	Latimeria_chalumnae
ENSECAG00000012085	SWT1	66	38.515	ENSLOCG00000001749	swt1	99	40.147	Lepisosteus_oculatus
ENSECAG00000012085	SWT1	68	84.354	ENSLAFG00000004346	-	100	84.354	Loxodonta_africana
ENSECAG00000012085	SWT1	98	77.818	ENSMFAG00000031793	SWT1	99	81.538	Macaca_fascicularis
ENSECAG00000012085	SWT1	98	75.416	ENSMMUG00000013882	SWT1	99	78.694	Macaca_mulatta
ENSECAG00000012085	SWT1	98	77.578	ENSMNEG00000035502	SWT1	99	81.368	Macaca_nemestrina
ENSECAG00000012085	SWT1	98	78.700	ENSMLEG00000038692	SWT1	99	82.003	Mandrillus_leucophaeus
ENSECAG00000012085	SWT1	67	50.836	ENSMGAG00000000973	SWT1	100	50.836	Meleagris_gallopavo
ENSECAG00000012085	SWT1	99	65.588	ENSMAUG00000007996	Swt1	89	65.588	Mesocricetus_auratus
ENSECAG00000012085	SWT1	99	80.935	ENSMICG00000014975	SWT1	92	80.964	Microcebus_murinus
ENSECAG00000012085	SWT1	99	72.182	ENSMOCG00000009776	Swt1	90	72.289	Microtus_ochrogaster
ENSECAG00000012085	SWT1	98	58.989	ENSMODG00000007472	SWT1	92	58.989	Monodelphis_domestica
ENSECAG00000012085	SWT1	63	34.043	ENSMALG00000019308	swt1	57	34.215	Monopterus_albus
ENSECAG00000012085	SWT1	99	69.148	MGP_CAROLIEiJ_G0014692	Swt1	92	70.228	Mus_caroli
ENSECAG00000012085	SWT1	98	68.351	ENSMUSG00000052748	Swt1	90	69.434	Mus_musculus
ENSECAG00000012085	SWT1	100	69.540	MGP_PahariEiJ_G0027928	Swt1	90	71.463	Mus_pahari
ENSECAG00000012085	SWT1	98	69.073	MGP_SPRETEiJ_G0015499	Swt1	90	70.156	Mus_spretus
ENSECAG00000012085	SWT1	99	78.897	ENSMPUG00000011913	SWT1	92	78.916	Mustela_putorius_furo
ENSECAG00000012085	SWT1	99	76.739	ENSMLUG00000001142	SWT1	90	76.747	Myotis_lucifugus
ENSECAG00000012085	SWT1	99	73.381	ENSNGAG00000021080	Swt1	90	73.381	Nannospalax_galili
ENSECAG00000012085	SWT1	99	77.431	ENSNLEG00000018031	SWT1	92	77.431	Nomascus_leucogenys
ENSECAG00000012085	SWT1	95	49.256	ENSMEUG00000000236	-	89	49.752	Notamacropus_eugenii
ENSECAG00000012085	SWT1	86	62.559	ENSOPRG00000000692	SWT1	82	62.559	Ochotona_princeps
ENSECAG00000012085	SWT1	62	32.486	ENSONIG00000009994	swt1	99	32.486	Oreochromis_niloticus
ENSECAG00000012085	SWT1	85	56.563	ENSOANG00000001013	-	94	55.570	Ornithorhynchus_anatinus
ENSECAG00000012085	SWT1	99	69.424	ENSOCUG00000004901	SWT1	92	69.424	Oryctolagus_cuniculus
ENSECAG00000012085	SWT1	63	32.358	ENSORLG00000009682	swt1	58	32.358	Oryzias_latipes
ENSECAG00000012085	SWT1	63	32.530	ENSORLG00020011654	swt1	59	32.530	Oryzias_latipes_hni
ENSECAG00000012085	SWT1	63	32.530	ENSORLG00015007734	swt1	59	32.530	Oryzias_latipes_hsok
ENSECAG00000012085	SWT1	63	33.625	ENSOMEG00000006607	swt1	57	33.625	Oryzias_melastigma
ENSECAG00000012085	SWT1	99	77.458	ENSOGAG00000016195	SWT1	92	77.470	Otolemur_garnettii
ENSECAG00000012085	SWT1	99	80.216	ENSOARG00000004156	SWT1	90	80.241	Ovis_aries
ENSECAG00000012085	SWT1	99	77.311	ENSPPAG00000021400	SWT1	92	77.311	Pan_paniscus
ENSECAG00000012085	SWT1	99	80.912	ENSPPRG00000023754	SWT1	92	80.912	Panthera_pardus
ENSECAG00000012085	SWT1	99	80.792	ENSPTIG00000021889	SWT1	92	80.792	Panthera_tigris_altaica
ENSECAG00000012085	SWT1	99	77.311	ENSPTRG00000001777	SWT1	92	77.311	Pan_troglodytes
ENSECAG00000012085	SWT1	99	77.672	ENSPANG00000005099	SWT1	99	81.324	Papio_anubis
ENSECAG00000012085	SWT1	65	35.253	ENSPKIG00000005979	swt1	59	35.253	Paramormyrops_kingsleyae
ENSECAG00000012085	SWT1	97	45.047	ENSPSIG00000008961	SWT1	91	45.047	Pelodiscus_sinensis
ENSECAG00000012085	SWT1	99	72.302	ENSPEMG00000008208	Swt1	90	72.302	Peromyscus_maniculatus_bairdii
ENSECAG00000012085	SWT1	99	60.046	ENSPCIG00000002443	SWT1	93	77.099	Phascolarctos_cinereus
ENSECAG00000012085	SWT1	58	44.944	ENSPFOG00000010988	-	57	44.944	Poecilia_formosa
ENSECAG00000012085	SWT1	99	77.551	ENSPPYG00000000415	SWT1	92	77.551	Pongo_abelii
ENSECAG00000012085	SWT1	91	78.906	ENSPCAG00000008337	SWT1	85	78.906	Procavia_capensis
ENSECAG00000012085	SWT1	78	85.714	ENSPCOG00000018195	-	94	85.714	Propithecus_coquereli
ENSECAG00000012085	SWT1	84	78.151	ENSPVAG00000005968	SWT1	80	78.116	Pteropus_vampyrus
ENSECAG00000012085	SWT1	66	36.054	ENSPNAG00000017795	swt1	59	36.054	Pygocentrus_nattereri
ENSECAG00000012085	SWT1	99	70.370	ENSRNOG00000032258	Swt1	90	71.326	Rattus_norvegicus
ENSECAG00000012085	SWT1	99	76.703	ENSRBIG00000040630	SWT1	99	79.010	Rhinopithecus_bieti
ENSECAG00000012085	SWT1	69	75.042	ENSRROG00000028596	SWT1	93	75.042	Rhinopithecus_roxellana
ENSECAG00000012085	SWT1	99	79.112	ENSSBOG00000028825	SWT1	92	79.112	Saimiri_boliviensis_boliviensis
ENSECAG00000012085	SWT1	99	60.234	ENSSHAG00000009241	SWT1	92	60.234	Sarcophilus_harrisii
ENSECAG00000012085	SWT1	65	39.787	ENSSFOG00015004895	swt1	57	39.787	Scleropages_formosus
ENSECAG00000012085	SWT1	63	32.353	ENSSDUG00000012345	swt1	58	32.353	Seriola_dumerili
ENSECAG00000012085	SWT1	63	32.180	ENSSLDG00000003821	swt1	58	32.180	Seriola_lalandi_dorsalis
ENSECAG00000012085	SWT1	54	75.463	ENSSARG00000011524	-	85	75.463	Sorex_araneus
ENSECAG00000012085	SWT1	83	49.017	ENSSPUG00000003899	SWT1	83	48.038	Sphenodon_punctatus
ENSECAG00000012085	SWT1	63	30.849	ENSSPAG00000001030	swt1	58	30.849	Stegastes_partitus
ENSECAG00000012085	SWT1	99	83.333	ENSSSCG00000015569	SWT1	92	83.494	Sus_scrofa
ENSECAG00000012085	SWT1	65	52.984	ENSTGUG00000003718	-	100	52.984	Taeniopygia_guttata
ENSECAG00000012085	SWT1	64	34.403	ENSTRUG00000006420	swt1	61	34.403	Takifugu_rubripes
ENSECAG00000012085	SWT1	98	81.227	ENSTTRG00000005914	SWT1	92	81.227	Tursiops_truncatus
ENSECAG00000012085	SWT1	99	81.146	ENSUAMG00000020937	SWT1	99	81.159	Ursus_americanus
ENSECAG00000012085	SWT1	99	80.695	ENSUMAG00000021918	SWT1	92	80.723	Ursus_maritimus
ENSECAG00000012085	SWT1	90	84.634	ENSVPAG00000011855	SWT1	84	84.634	Vicugna_pacos
ENSECAG00000012085	SWT1	99	80.576	ENSVVUG00000009182	SWT1	95	80.576	Vulpes_vulpes