EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSECAG00000012136 (Gene tree)
Gene ID: 100059606
Gene Symbol: DDB1
Alias: -
Full Name: damage specific DNA binding protein 1
Gene Type: protein_coding
Species: Equus_caballus
Status: putative
Strand: Minus strand
Length: 28924 bases
Position: chr12:24887690-24916613
Accession: 17069
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSECAP00000010678	CPSF_A	PF03178.15	6.6e-86	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSECAT00000013446	-	4247	XM_001502022	ENSECAP00000010678	1140 (aa)	XP_001502072	F6QDR0

Gene Model

Click here to download ENSECAG00000012136's gene model file

Pathways

Pathway ID	Pathway Name	Source
ecb03420	Nucleotide excision repair	KEGG
ecb04120	Ubiquitin mediated proteolysis	KEGG
ecb05161	Hepatitis B	KEGG
ecb05170	Human immunodeficiency virus 1 infection	KEGG
ecb05203	Viral carcinogenesis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSECAG00000012136's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSECAG00000012136	DDB1	100	99.649	ENSG00000167986	DDB1	100	100.000	Homo_sapiens
ENSECAG00000012136	DDB1	98	91.465	ENSAPOG00000005036	ddb1	99	91.531	Acanthochromis_polyacanthus
ENSECAG00000012136	DDB1	100	99.737	ENSAMEG00000016518	DDB1	100	99.737	Ailuropoda_melanoleuca
ENSECAG00000012136	DDB1	86	91.837	ENSACIG00000020624	ddb1	99	91.837	Amphilophus_citrinellus
ENSECAG00000012136	DDB1	100	91.140	ENSAOCG00000003066	ddb1	100	91.140	Amphiprion_ocellaris
ENSECAG00000012136	DDB1	100	91.228	ENSAPEG00000000092	ddb1	100	91.228	Amphiprion_percula
ENSECAG00000012136	DDB1	94	91.721	ENSATEG00000020571	ddb1	97	91.721	Anabas_testudineus
ENSECAG00000012136	DDB1	98	96.444	ENSAPLG00000007174	DDB1	99	96.444	Anas_platyrhynchos
ENSECAG00000012136	DDB1	100	96.930	ENSACAG00000017758	DDB1	100	96.930	Anolis_carolinensis
ENSECAG00000012136	DDB1	100	99.649	ENSANAG00000021878	DDB1	100	99.649	Aotus_nancymaae
ENSECAG00000012136	DDB1	100	91.491	ENSACLG00000012401	ddb1	100	91.491	Astatotilapia_calliptera
ENSECAG00000012136	DDB1	100	99.561	ENSBTAG00000021569	DDB1	93	99.561	Bos_taurus
ENSECAG00000012136	DDB1	100	37.371	WBGene00010890	ddb-1	100	37.371	Caenorhabditis_elegans
ENSECAG00000012136	DDB1	100	99.649	ENSCJAG00000019319	DDB1	100	99.649	Callithrix_jacchus
ENSECAG00000012136	DDB1	100	99.737	ENSCAFG00000016264	DDB1	100	99.737	Canis_familiaris
ENSECAG00000012136	DDB1	94	99.442	ENSCAFG00020012722	DDB1	99	99.442	Canis_lupus_dingo
ENSECAG00000012136	DDB1	100	99.561	ENSCHIG00000014969	DDB1	100	99.561	Capra_hircus
ENSECAG00000012136	DDB1	100	98.947	ENSTSYG00000008027	DDB1	100	98.947	Carlito_syrichta
ENSECAG00000012136	DDB1	98	98.928	ENSCAPG00000010786	DDB1	100	98.928	Cavia_aperea
ENSECAG00000012136	DDB1	100	98.947	ENSCPOG00000009956	DDB1	100	98.947	Cavia_porcellus
ENSECAG00000012136	DDB1	100	99.649	ENSCCAG00000035883	DDB1	100	99.649	Cebus_capucinus
ENSECAG00000012136	DDB1	100	97.135	ENSCATG00000044495	DDB1	100	97.135	Cercocebus_atys
ENSECAG00000012136	DDB1	100	99.035	ENSCLAG00000004126	DDB1	100	99.035	Chinchilla_lanigera
ENSECAG00000012136	DDB1	100	99.649	ENSCSAG00000006392	DDB1	100	99.649	Chlorocebus_sabaeus
ENSECAG00000012136	DDB1	88	92.424	ENSCHOG00000011377	DDB1	90	92.424	Choloepus_hoffmanni
ENSECAG00000012136	DDB1	100	97.632	ENSCPBG00000017728	DDB1	100	97.632	Chrysemys_picta_bellii
ENSECAG00000012136	DDB1	100	61.979	ENSCING00000007437	-	100	61.806	Ciona_intestinalis
ENSECAG00000012136	DDB1	94	60.184	ENSCSAVG00000004783	-	100	60.184	Ciona_savignyi
ENSECAG00000012136	DDB1	100	99.649	ENSCANG00000019948	DDB1	100	99.649	Colobus_angolensis_palliatus
ENSECAG00000012136	DDB1	100	99.649	ENSCGRG00001016599	Ddb1	100	99.649	Cricetulus_griseus_chok1gshd
ENSECAG00000012136	DDB1	100	99.649	ENSCGRG00000013427	Ddb1	100	99.649	Cricetulus_griseus_crigri
ENSECAG00000012136	DDB1	93	91.235	ENSCSEG00000012499	ddb1	99	89.676	Cynoglossus_semilaevis
ENSECAG00000012136	DDB1	94	91.519	ENSCVAG00000019531	ddb1	99	91.519	Cyprinodon_variegatus
ENSECAG00000012136	DDB1	100	88.354	ENSDARG00000074431	ddb1	100	88.472	Danio_rerio
ENSECAG00000012136	DDB1	94	99.070	ENSDNOG00000014884	DDB1	97	99.070	Dasypus_novemcinctus
ENSECAG00000012136	DDB1	84	100.000	ENSDORG00000000127	Ddb1	100	100.000	Dipodomys_ordii
ENSECAG00000012136	DDB1	100	61.048	FBgn0260962	pic	100	60.839	Drosophila_melanogaster
ENSECAG00000012136	DDB1	71	100.000	ENSETEG00000001053	-	71	100.000	Echinops_telfairi
ENSECAG00000012136	DDB1	78	84.927	ENSEBUG00000014593	ddb1	97	84.927	Eptatretus_burgeri
ENSECAG00000012136	DDB1	100	99.912	ENSEASG00005008184	DDB1	100	99.912	Equus_asinus_asinus
ENSECAG00000012136	DDB1	85	97.138	ENSEEUG00000003194	DDB1	85	97.138	Erinaceus_europaeus
ENSECAG00000012136	DDB1	100	91.228	ENSELUG00000023868	ddb1	100	91.228	Esox_lucius
ENSECAG00000012136	DDB1	100	99.737	ENSFCAG00000029716	DDB1	100	99.737	Felis_catus
ENSECAG00000012136	DDB1	100	96.850	ENSFALG00000011981	DDB1	100	96.850	Ficedula_albicollis
ENSECAG00000012136	DDB1	100	98.947	ENSFDAG00000005128	DDB1	100	98.947	Fukomys_damarensis
ENSECAG00000012136	DDB1	90	90.588	ENSFHEG00000022133	ddb1	98	90.670	Fundulus_heteroclitus
ENSECAG00000012136	DDB1	79	94.649	ENSGMOG00000019386	ddb1	94	94.649	Gadus_morhua
ENSECAG00000012136	DDB1	100	97.018	ENSGALG00000042333	DDB1	100	97.018	Gallus_gallus
ENSECAG00000012136	DDB1	94	91.240	ENSGAFG00000013142	ddb1	99	91.240	Gambusia_affinis
ENSECAG00000012136	DDB1	96	90.651	ENSGACG00000017182	ddb1	100	90.651	Gasterosteus_aculeatus
ENSECAG00000012136	DDB1	95	97.694	ENSGAGG00000014124	DDB1	100	97.694	Gopherus_agassizii
ENSECAG00000012136	DDB1	100	99.649	ENSGGOG00000004052	DDB1	100	99.649	Gorilla_gorilla
ENSECAG00000012136	DDB1	100	91.491	ENSHBUG00000008873	ddb1	100	91.491	Haplochromis_burtoni
ENSECAG00000012136	DDB1	100	98.860	ENSHGLG00000018430	DDB1	100	98.860	Heterocephalus_glaber_female
ENSECAG00000012136	DDB1	100	97.807	ENSHGLG00100014475	DDB1	100	97.807	Heterocephalus_glaber_male
ENSECAG00000012136	DDB1	94	90.985	ENSHCOG00000018670	ddb1	98	90.985	Hippocampus_comes
ENSECAG00000012136	DDB1	100	90.439	ENSIPUG00000005612	DDB1	100	90.439	Ictalurus_punctatus
ENSECAG00000012136	DDB1	100	99.649	ENSSTOG00000007552	DDB1	100	99.649	Ictidomys_tridecemlineatus
ENSECAG00000012136	DDB1	100	99.474	ENSJJAG00000017769	Ddb1	100	99.474	Jaculus_jaculus
ENSECAG00000012136	DDB1	94	91.333	ENSKMAG00000002315	ddb1	99	91.333	Kryptolebias_marmoratus
ENSECAG00000012136	DDB1	85	91.503	ENSLBEG00000017065	ddb1	99	91.503	Labrus_bergylta
ENSECAG00000012136	DDB1	100	93.433	ENSLACG00000017611	DDB1	100	93.433	Latimeria_chalumnae
ENSECAG00000012136	DDB1	92	83.333	ENSLOCG00000000012	ddb1	100	83.333	Lepisosteus_oculatus
ENSECAG00000012136	DDB1	100	99.474	ENSLAFG00000011513	DDB1	100	99.474	Loxodonta_africana
ENSECAG00000012136	DDB1	100	99.649	ENSMFAG00000042035	DDB1	100	99.649	Macaca_fascicularis
ENSECAG00000012136	DDB1	99	99.646	ENSMMUG00000002691	DDB1	99	99.646	Macaca_mulatta
ENSECAG00000012136	DDB1	100	99.649	ENSMNEG00000031559	DDB1	100	99.649	Macaca_nemestrina
ENSECAG00000012136	DDB1	100	99.649	ENSMLEG00000044136	DDB1	100	99.649	Mandrillus_leucophaeus
ENSECAG00000012136	DDB1	100	91.579	ENSMAMG00000014372	ddb1	100	91.579	Mastacembelus_armatus
ENSECAG00000012136	DDB1	100	91.404	ENSMZEG00005013835	ddb1	100	91.404	Maylandia_zebra
ENSECAG00000012136	DDB1	94	96.369	ENSMGAG00000004990	DDB1	100	96.369	Meleagris_gallopavo
ENSECAG00000012136	DDB1	100	99.649	ENSMAUG00000012926	Ddb1	100	99.649	Mesocricetus_auratus
ENSECAG00000012136	DDB1	100	99.649	ENSMICG00000013703	DDB1	100	99.649	Microcebus_murinus
ENSECAG00000012136	DDB1	100	99.386	ENSMOCG00000020499	Ddb1	100	99.386	Microtus_ochrogaster
ENSECAG00000012136	DDB1	86	91.837	ENSMMOG00000001758	ddb1	99	91.837	Mola_mola
ENSECAG00000012136	DDB1	100	89.187	ENSMODG00000020353	DDB1	100	89.187	Monodelphis_domestica
ENSECAG00000012136	DDB1	100	91.491	ENSMALG00000014071	ddb1	100	91.491	Monopterus_albus
ENSECAG00000012136	DDB1	100	99.649	MGP_CAROLIEiJ_G0022695	Ddb1	100	99.649	Mus_caroli
ENSECAG00000012136	DDB1	100	99.561	ENSMUSG00000024740	Ddb1	100	99.561	Mus_musculus
ENSECAG00000012136	DDB1	100	99.649	MGP_PahariEiJ_G0014189	Ddb1	100	99.649	Mus_pahari
ENSECAG00000012136	DDB1	100	99.649	MGP_SPRETEiJ_G0023609	Ddb1	100	99.649	Mus_spretus
ENSECAG00000012136	DDB1	100	96.404	ENSMPUG00000014200	DDB1	100	96.404	Mustela_putorius_furo
ENSECAG00000012136	DDB1	100	99.211	ENSMLUG00000013232	DDB1	100	99.211	Myotis_lucifugus
ENSECAG00000012136	DDB1	100	99.211	ENSNGAG00000009384	Ddb1	100	99.211	Nannospalax_galili
ENSECAG00000012136	DDB1	100	91.579	ENSNBRG00000019581	ddb1	100	91.579	Neolamprologus_brichardi
ENSECAG00000012136	DDB1	100	96.528	ENSNLEG00000002022	DDB1	100	96.528	Nomascus_leucogenys
ENSECAG00000012136	DDB1	91	99.648	ENSMEUG00000001099	DDB1	93	99.648	Notamacropus_eugenii
ENSECAG00000012136	DDB1	90	90.980	ENSOPRG00000008254	DDB1	90	90.980	Ochotona_princeps
ENSECAG00000012136	DDB1	100	98.860	ENSODEG00000002419	DDB1	100	98.860	Octodon_degus
ENSECAG00000012136	DDB1	100	91.491	ENSONIG00000005804	ddb1	100	91.491	Oreochromis_niloticus
ENSECAG00000012136	DDB1	91	98.062	ENSOANG00000004897	DDB1	100	98.062	Ornithorhynchus_anatinus
ENSECAG00000012136	DDB1	100	99.649	ENSOCUG00000001667	DDB1	100	99.649	Oryctolagus_cuniculus
ENSECAG00000012136	DDB1	96	90.009	ENSORLG00000001399	ddb1	98	91.258	Oryzias_latipes
ENSECAG00000012136	DDB1	96	89.918	ENSORLG00020001277	ddb1	97	89.918	Oryzias_latipes_hni
ENSECAG00000012136	DDB1	94	91.070	ENSORLG00015002080	ddb1	99	91.070	Oryzias_latipes_hsok
ENSECAG00000012136	DDB1	96	89.881	ENSOMEG00000006181	ddb1	99	89.881	Oryzias_melastigma
ENSECAG00000012136	DDB1	100	99.474	ENSOGAG00000016103	DDB1	100	99.474	Otolemur_garnettii
ENSECAG00000012136	DDB1	99	99.555	ENSOARG00000011716	DDB1	98	99.555	Ovis_aries
ENSECAG00000012136	DDB1	100	99.649	ENSPPAG00000035343	DDB1	100	99.649	Pan_paniscus
ENSECAG00000012136	DDB1	100	99.737	ENSPPRG00000013300	DDB1	100	99.737	Panthera_pardus
ENSECAG00000012136	DDB1	98	99.732	ENSPTIG00000006909	DDB1	98	99.732	Panthera_tigris_altaica
ENSECAG00000012136	DDB1	100	99.649	ENSPTRG00000003737	DDB1	100	99.649	Pan_troglodytes
ENSECAG00000012136	DDB1	100	99.649	ENSPANG00000000242	DDB1	100	99.649	Papio_anubis
ENSECAG00000012136	DDB1	94	91.333	ENSPKIG00000019213	ddb1	94	91.333	Paramormyrops_kingsleyae
ENSECAG00000012136	DDB1	98	96.975	ENSPSIG00000013275	DDB1	100	96.975	Pelodiscus_sinensis
ENSECAG00000012136	DDB1	86	91.531	ENSPMGG00000021179	ddb1	99	91.531	Periophthalmus_magnuspinnatus
ENSECAG00000012136	DDB1	100	99.649	ENSPEMG00000012241	Ddb1	100	99.649	Peromyscus_maniculatus_bairdii
ENSECAG00000012136	DDB1	89	86.935	ENSPMAG00000008479	ddb1	100	86.935	Petromyzon_marinus
ENSECAG00000012136	DDB1	100	98.947	ENSPCIG00000002643	DDB1	100	98.947	Phascolarctos_cinereus
ENSECAG00000012136	DDB1	100	90.885	ENSPFOG00000002768	ddb1	100	90.885	Poecilia_formosa
ENSECAG00000012136	DDB1	100	90.702	ENSPLAG00000017227	ddb1	100	90.702	Poecilia_latipinna
ENSECAG00000012136	DDB1	100	90.702	ENSPMEG00000011398	ddb1	100	90.702	Poecilia_mexicana
ENSECAG00000012136	DDB1	94	91.349	ENSPREG00000004440	ddb1	98	91.349	Poecilia_reticulata
ENSECAG00000012136	DDB1	100	94.677	ENSPPYG00000003193	DDB1	100	94.677	Pongo_abelii
ENSECAG00000012136	DDB1	85	99.104	ENSPCAG00000011040	DDB1	85	99.104	Procavia_capensis
ENSECAG00000012136	DDB1	100	98.074	ENSPCOG00000015176	DDB1	100	98.074	Propithecus_coquereli
ENSECAG00000012136	DDB1	100	99.561	ENSPVAG00000003847	DDB1	100	99.561	Pteropus_vampyrus
ENSECAG00000012136	DDB1	94	91.333	ENSPNAG00000006635	ddb1	97	91.333	Pygocentrus_nattereri
ENSECAG00000012136	DDB1	100	99.561	ENSRNOG00000020715	Ddb1	100	99.561	Rattus_norvegicus
ENSECAG00000012136	DDB1	100	99.649	ENSRBIG00000033611	DDB1	100	99.649	Rhinopithecus_bieti
ENSECAG00000012136	DDB1	100	99.649	ENSRROG00000041407	DDB1	100	99.649	Rhinopithecus_roxellana
ENSECAG00000012136	DDB1	100	99.561	ENSSBOG00000019775	DDB1	100	99.561	Saimiri_boliviensis_boliviensis
ENSECAG00000012136	DDB1	94	96.916	ENSSHAG00000011600	DDB1	100	96.916	Sarcophilus_harrisii
ENSECAG00000012136	DDB1	94	91.543	ENSSFOG00015011151	ddb1	97	91.543	Scleropages_formosus
ENSECAG00000012136	DDB1	100	91.053	ENSSMAG00000009495	ddb1	100	91.053	Scophthalmus_maximus
ENSECAG00000012136	DDB1	100	91.404	ENSSDUG00000004642	ddb1	100	91.404	Seriola_dumerili
ENSECAG00000012136	DDB1	100	91.404	ENSSLDG00000015804	ddb1	100	91.404	Seriola_lalandi_dorsalis
ENSECAG00000012136	DDB1	70	100.000	ENSSARG00000003290	-	72	100.000	Sorex_araneus
ENSECAG00000012136	DDB1	100	97.982	ENSSPUG00000019338	DDB1	100	97.982	Sphenodon_punctatus
ENSECAG00000012136	DDB1	94	91.628	ENSSPAG00000009888	ddb1	99	91.628	Stegastes_partitus
ENSECAG00000012136	DDB1	100	98.684	ENSSSCG00000013094	DDB1	100	98.684	Sus_scrofa
ENSECAG00000012136	DDB1	100	97.018	ENSTGUG00000006414	DDB1	100	97.018	Taeniopygia_guttata
ENSECAG00000012136	DDB1	94	90.308	ENSTRUG00000016682	ddb1	98	90.308	Takifugu_rubripes
ENSECAG00000012136	DDB1	88	85.030	ENSTNIG00000009565	ddb1	99	85.030	Tetraodon_nigroviridis
ENSECAG00000012136	DDB1	92	94.648	ENSTTRG00000011055	DDB1	94	94.648	Tursiops_truncatus
ENSECAG00000012136	DDB1	94	99.442	ENSUAMG00000017793	DDB1	93	99.442	Ursus_americanus
ENSECAG00000012136	DDB1	94	99.442	ENSUMAG00000011788	DDB1	98	99.442	Ursus_maritimus
ENSECAG00000012136	DDB1	90	100.000	ENSVPAG00000007963	DDB1	92	100.000	Vicugna_pacos
ENSECAG00000012136	DDB1	100	99.649	ENSVVUG00000004987	DDB1	100	99.649	Vulpes_vulpes
ENSECAG00000012136	DDB1	100	93.182	ENSXETG00000008820	ddb1	100	93.182	Xenopus_tropicalis
ENSECAG00000012136	DDB1	86	91.327	ENSXCOG00000013956	ddb1	99	91.327	Xiphophorus_couchianus
ENSECAG00000012136	DDB1	94	91.240	ENSXMAG00000000022	ddb1	99	91.240	Xiphophorus_maculatus