EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSECAG00000012338 (Gene tree)
Gene ID: 100065914
Gene Symbol: URB2
Alias: -
Full Name: URB2 ribosome biogenesis homolog
Gene Type: protein_coding
Species: Equus_caballus
Status: putative
Strand: Minus strand
Length: 32195 bases
Position: chr1:68763655-68795849
Accession: 57215
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSECAP00000010166	Urb2	PF10441.9	2.2e-23	1	1
ENSECAP00000032523	Urb2	PF10441.9	2.3e-23	1	1
ENSECAP00000024637	Urb2	PF10441.9	1.4e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSECAT00000036282	-	4234	-	ENSECAP00000024637	1406 (aa)	-	-
ENSECAT00000056114	-	4674	-	ENSECAP00000032523	1557 (aa)	-	-
ENSECAT00000012864	-	4588	XM_023646266	ENSECAP00000010166	1524 (aa)	XP_023502033	F6RYS1

Gene Model

Click here to download ENSECAG00000012338's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSECAG00000012338's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSECAG00000012338	URB2	99	87.234	ENSG00000135763	URB2	100	85.714	Homo_sapiens
ENSECAG00000012338	URB2	88	62.937	ENSAPOG00000000608	urb2	87	62.937	Acanthochromis_polyacanthus
ENSECAG00000012338	URB2	100	91.549	ENSAMEG00000009206	URB2	100	85.433	Ailuropoda_melanoleuca
ENSECAG00000012338	URB2	100	62.759	ENSAOCG00000019961	urb2	93	62.759	Amphiprion_ocellaris
ENSECAG00000012338	URB2	100	62.937	ENSAPEG00000005263	urb2	93	62.937	Amphiprion_percula
ENSECAG00000012338	URB2	100	62.937	ENSATEG00000020930	urb2	94	62.937	Anabas_testudineus
ENSECAG00000012338	URB2	97	69.014	ENSAPLG00000002998	URB2	92	69.014	Anas_platyrhynchos
ENSECAG00000012338	URB2	99	62.676	ENSACAG00000001285	URB2	93	62.676	Anolis_carolinensis
ENSECAG00000012338	URB2	99	88.652	ENSANAG00000033963	URB2	93	88.652	Aotus_nancymaae
ENSECAG00000012338	URB2	88	61.538	ENSACLG00000009254	urb2	87	61.538	Astatotilapia_calliptera
ENSECAG00000012338	URB2	99	57.143	ENSAMXG00000003474	urb2	91	57.143	Astyanax_mexicanus
ENSECAG00000012338	URB2	100	81.690	ENSBTAG00000010180	URB2	93	81.690	Bos_taurus
ENSECAG00000012338	URB2	99	87.943	ENSCJAG00000010968	URB2	99	82.009	Callithrix_jacchus
ENSECAG00000012338	URB2	99	91.489	ENSCAFG00000012118	URB2	93	91.489	Canis_familiaris
ENSECAG00000012338	URB2	93	91.489	ENSCAFG00020027217	URB2	93	91.489	Canis_lupus_dingo
ENSECAG00000012338	URB2	100	77.465	ENSCHIG00000014513	URB2	100	74.934	Capra_hircus
ENSECAG00000012338	URB2	100	85.915	ENSTSYG00000006924	URB2	100	79.856	Carlito_syrichta
ENSECAG00000012338	URB2	64	83.642	ENSCPOG00000020777	-	99	79.310	Cavia_porcellus
ENSECAG00000012338	URB2	99	87.943	ENSCCAG00000023932	URB2	99	82.075	Cebus_capucinus
ENSECAG00000012338	URB2	99	87.234	ENSCATG00000043366	URB2	95	87.234	Cercocebus_atys
ENSECAG00000012338	URB2	99	85.816	ENSCLAG00000006268	URB2	93	85.816	Chinchilla_lanigera
ENSECAG00000012338	URB2	99	86.525	ENSCSAG00000010599	URB2	99	82.009	Chlorocebus_sabaeus
ENSECAG00000012338	URB2	66	90.780	ENSCHOG00000010163	URB2	63	90.780	Choloepus_hoffmanni
ENSECAG00000012338	URB2	99	72.535	ENSCPBG00000006191	URB2	93	72.535	Chrysemys_picta_bellii
ENSECAG00000012338	URB2	99	89.362	ENSCANG00000023711	URB2	93	89.362	Colobus_angolensis_palliatus
ENSECAG00000012338	URB2	99	82.270	ENSCGRG00001009591	Urb2	93	82.270	Cricetulus_griseus_chok1gshd
ENSECAG00000012338	URB2	99	82.270	ENSCGRG00000011259	Urb2	93	82.270	Cricetulus_griseus_crigri
ENSECAG00000012338	URB2	100	57.241	ENSCSEG00000000299	urb2	94	57.241	Cynoglossus_semilaevis
ENSECAG00000012338	URB2	100	58.621	ENSCVAG00000011011	urb2	93	58.621	Cyprinodon_variegatus
ENSECAG00000012338	URB2	99	59.310	ENSDARG00000003217	urb2	98	61.165	Danio_rerio
ENSECAG00000012338	URB2	97	76.761	ENSDNOG00000043064	URB2	92	76.761	Dasypus_novemcinctus
ENSECAG00000012338	URB2	99	80.851	ENSDORG00000014975	Urb2	93	80.851	Dipodomys_ordii
ENSECAG00000012338	URB2	100	74.508	ENSETEG00000002869	URB2	95	74.618	Echinops_telfairi
ENSECAG00000012338	URB2	100	99.296	ENSEASG00005012060	URB2	100	99.147	Equus_asinus_asinus
ENSECAG00000012338	URB2	99	82.857	ENSEEUG00000002669	URB2	92	82.857	Erinaceus_europaeus
ENSECAG00000012338	URB2	98	65.833	ENSELUG00000014647	urb2	92	63.448	Esox_lucius
ENSECAG00000012338	URB2	99	89.362	ENSFCAG00000007662	URB2	93	89.362	Felis_catus
ENSECAG00000012338	URB2	99	56.216	ENSFALG00000003385	URB2	95	56.216	Ficedula_albicollis
ENSECAG00000012338	URB2	99	82.979	ENSFDAG00000021079	URB2	93	82.979	Fukomys_damarensis
ENSECAG00000012338	URB2	100	60.140	ENSFHEG00000010357	urb2	93	60.140	Fundulus_heteroclitus
ENSECAG00000012338	URB2	91	57.447	ENSGMOG00000012459	urb2	93	57.447	Gadus_morhua
ENSECAG00000012338	URB2	99	66.197	ENSGALG00000011101	URB2	93	66.197	Gallus_gallus
ENSECAG00000012338	URB2	100	62.937	ENSGACG00000016179	urb2	93	62.937	Gasterosteus_aculeatus
ENSECAG00000012338	URB2	99	71.831	ENSGAGG00000021879	URB2	96	71.831	Gopherus_agassizii
ENSECAG00000012338	URB2	99	87.234	ENSGGOG00000025643	URB2	99	82.141	Gorilla_gorilla
ENSECAG00000012338	URB2	100	61.538	ENSHBUG00000018469	urb2	93	61.538	Haplochromis_burtoni
ENSECAG00000012338	URB2	97	85.816	ENSHGLG00000016561	URB2	91	85.816	Heterocephalus_glaber_female
ENSECAG00000012338	URB2	99	85.816	ENSHGLG00100001838	URB2	92	85.816	Heterocephalus_glaber_male
ENSECAG00000012338	URB2	100	50.262	ENSIPUG00000020315	urb2	97	50.262	Ictalurus_punctatus
ENSECAG00000012338	URB2	99	81.560	ENSSTOG00000025323	URB2	93	81.560	Ictidomys_tridecemlineatus
ENSECAG00000012338	URB2	99	80.142	ENSJJAG00000011998	Urb2	93	80.142	Jaculus_jaculus
ENSECAG00000012338	URB2	100	58.621	ENSKMAG00000020129	urb2	93	58.621	Kryptolebias_marmoratus
ENSECAG00000012338	URB2	99	53.968	ENSLACG00000002038	URB2	95	53.968	Latimeria_chalumnae
ENSECAG00000012338	URB2	99	42.797	ENSLOCG00000015462	urb2	99	41.150	Lepisosteus_oculatus
ENSECAG00000012338	URB2	99	87.234	ENSLAFG00000012484	URB2	93	87.234	Loxodonta_africana
ENSECAG00000012338	URB2	99	87.234	ENSMFAG00000039905	URB2	99	81.812	Macaca_fascicularis
ENSECAG00000012338	URB2	99	87.234	ENSMMUG00000009509	URB2	99	81.812	Macaca_mulatta
ENSECAG00000012338	URB2	99	86.525	ENSMNEG00000038762	URB2	99	81.812	Macaca_nemestrina
ENSECAG00000012338	URB2	99	86.525	ENSMLEG00000043252	URB2	99	81.812	Mandrillus_leucophaeus
ENSECAG00000012338	URB2	100	62.937	ENSMAMG00000020365	urb2	93	62.937	Mastacembelus_armatus
ENSECAG00000012338	URB2	100	60.839	ENSMZEG00005011027	urb2	93	60.839	Maylandia_zebra
ENSECAG00000012338	URB2	94	66.901	ENSMGAG00000012073	URB2	93	66.901	Meleagris_gallopavo
ENSECAG00000012338	URB2	95	82.143	ENSMAUG00000017980	Urb2	99	69.095	Mesocricetus_auratus
ENSECAG00000012338	URB2	100	85.915	ENSMICG00000033302	URB2	100	80.774	Microcebus_murinus
ENSECAG00000012338	URB2	99	85.106	ENSMOCG00000020369	Urb2	93	85.106	Microtus_ochrogaster
ENSECAG00000012338	URB2	100	60.690	ENSMALG00000006529	urb2	94	60.690	Monopterus_albus
ENSECAG00000012338	URB2	99	79.433	ENSMUSG00000031976	Urb2	93	79.433	Mus_musculus
ENSECAG00000012338	URB2	99	91.429	ENSMPUG00000012438	URB2	93	91.429	Mustela_putorius_furo
ENSECAG00000012338	URB2	99	82.979	ENSNGAG00000016524	Urb2	93	82.979	Nannospalax_galili
ENSECAG00000012338	URB2	99	89.362	ENSNLEG00000014450	URB2	93	89.362	Nomascus_leucogenys
ENSECAG00000012338	URB2	93	62.830	ENSMEUG00000016434	URB2	94	62.830	Notamacropus_eugenii
ENSECAG00000012338	URB2	91	85.211	ENSOPRG00000009906	URB2	85	85.211	Ochotona_princeps
ENSECAG00000012338	URB2	99	83.688	ENSODEG00000005593	URB2	93	83.688	Octodon_degus
ENSECAG00000012338	URB2	100	61.538	ENSONIG00000017078	urb2	93	61.538	Oreochromis_niloticus
ENSECAG00000012338	URB2	100	74.825	ENSOANG00000013732	URB2	92	74.825	Ornithorhynchus_anatinus
ENSECAG00000012338	URB2	100	84.507	ENSOCUG00000010700	URB2	100	79.921	Oryctolagus_cuniculus
ENSECAG00000012338	URB2	100	57.931	ENSORLG00000010915	urb2	93	57.931	Oryzias_latipes
ENSECAG00000012338	URB2	100	57.931	ENSORLG00020003361	urb2	93	57.931	Oryzias_latipes_hni
ENSECAG00000012338	URB2	100	57.931	ENSORLG00015001534	urb2	93	57.931	Oryzias_latipes_hsok
ENSECAG00000012338	URB2	100	59.310	ENSOMEG00000010076	urb2	93	59.310	Oryzias_melastigma
ENSECAG00000012338	URB2	100	86.620	ENSOGAG00000003021	URB2	93	86.620	Otolemur_garnettii
ENSECAG00000012338	URB2	100	78.169	ENSOARG00000003102	URB2	100	74.672	Ovis_aries
ENSECAG00000012338	URB2	99	87.234	ENSPPAG00000040629	URB2	99	82.272	Pan_paniscus
ENSECAG00000012338	URB2	99	88.652	ENSPPRG00000012767	URB2	93	88.652	Panthera_pardus
ENSECAG00000012338	URB2	99	88.652	ENSPTIG00000012577	URB2	99	89.231	Panthera_tigris_altaica
ENSECAG00000012338	URB2	99	87.234	ENSPTRG00000002092	URB2	99	82.141	Pan_troglodytes
ENSECAG00000012338	URB2	99	87.943	ENSPANG00000002245	URB2	93	87.943	Papio_anubis
ENSECAG00000012338	URB2	99	62.500	ENSPKIG00000005787	urb2	92	63.889	Paramormyrops_kingsleyae
ENSECAG00000012338	URB2	99	71.127	ENSPSIG00000002690	URB2	93	71.127	Pelodiscus_sinensis
ENSECAG00000012338	URB2	95	84.416	ENSPEMG00000019551	Urb2	92	84.416	Peromyscus_maniculatus_bairdii
ENSECAG00000012338	URB2	99	77.305	ENSPCIG00000030071	URB2	93	77.305	Phascolarctos_cinereus
ENSECAG00000012338	URB2	100	57.343	ENSPFOG00000014330	urb2	93	57.343	Poecilia_formosa
ENSECAG00000012338	URB2	100	57.343	ENSPLAG00000014654	urb2	93	57.343	Poecilia_latipinna
ENSECAG00000012338	URB2	100	55.944	ENSPMEG00000012356	urb2	93	57.241	Poecilia_mexicana
ENSECAG00000012338	URB2	100	57.241	ENSPREG00000010268	urb2	93	57.241	Poecilia_reticulata
ENSECAG00000012338	URB2	100	87.324	ENSPPYG00000000123	URB2	100	81.693	Pongo_abelii
ENSECAG00000012338	URB2	100	86.620	ENSPCOG00000023537	URB2	100	81.627	Propithecus_coquereli
ENSECAG00000012338	URB2	100	66.339	ENSPVAG00000002108	URB2	100	66.339	Pteropus_vampyrus
ENSECAG00000012338	URB2	89	61.538	ENSPNYG00000016840	urb2	88	61.538	Pundamilia_nyererei
ENSECAG00000012338	URB2	99	57.042	ENSPNAG00000013684	urb2	91	57.042	Pygocentrus_nattereri
ENSECAG00000012338	URB2	99	80.142	ENSRNOG00000026853	Urb2	90	80.142	Rattus_norvegicus
ENSECAG00000012338	URB2	99	86.525	ENSRBIG00000037937	URB2	99	81.221	Rhinopithecus_bieti
ENSECAG00000012338	URB2	99	86.525	ENSRROG00000039854	URB2	99	81.156	Rhinopithecus_roxellana
ENSECAG00000012338	URB2	99	85.816	ENSSBOG00000023055	URB2	99	81.747	Saimiri_boliviensis_boliviensis
ENSECAG00000012338	URB2	99	76.596	ENSSHAG00000014735	URB2	93	76.596	Sarcophilus_harrisii
ENSECAG00000012338	URB2	97	62.069	ENSSFOG00015015432	urb2	90	62.069	Scleropages_formosus
ENSECAG00000012338	URB2	89	61.379	ENSSMAG00000004984	urb2	88	61.379	Scophthalmus_maximus
ENSECAG00000012338	URB2	100	61.379	ENSSDUG00000000902	urb2	93	61.379	Seriola_dumerili
ENSECAG00000012338	URB2	99	69.718	ENSSPUG00000018549	URB2	93	69.718	Sphenodon_punctatus
ENSECAG00000012338	URB2	100	63.636	ENSSPAG00000013632	urb2	93	63.636	Stegastes_partitus
ENSECAG00000012338	URB2	100	87.324	ENSSSCG00000010186	URB2	93	87.324	Sus_scrofa
ENSECAG00000012338	URB2	99	64.085	ENSTGUG00000009990	URB2	94	64.085	Taeniopygia_guttata
ENSECAG00000012338	URB2	99	62.937	ENSTRUG00000008173	urb2	93	62.937	Takifugu_rubripes
ENSECAG00000012338	URB2	90	61.538	ENSTNIG00000017689	urb2	91	61.538	Tetraodon_nigroviridis
ENSECAG00000012338	URB2	96	83.803	ENSTTRG00000014864	URB2	89	83.803	Tursiops_truncatus
ENSECAG00000012338	URB2	100	91.549	ENSUAMG00000015022	URB2	100	84.974	Ursus_americanus
ENSECAG00000012338	URB2	100	91.549	ENSUMAG00000004728	URB2	100	84.777	Ursus_maritimus
ENSECAG00000012338	URB2	68	89.362	ENSVPAG00000001750	-	63	89.362	Vicugna_pacos
ENSECAG00000012338	URB2	99	90.780	ENSVVUG00000006747	URB2	93	90.780	Vulpes_vulpes
ENSECAG00000012338	URB2	99	60.417	ENSXETG00000023331	urb2	93	60.417	Xenopus_tropicalis
ENSECAG00000012338	URB2	100	57.241	ENSXMAG00000015059	urb2	93	57.241	Xiphophorus_maculatus