EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSECAG00000012413 (Gene tree)
Gene ID: 100050101
Gene Symbol: PCBP3
Alias: FLJ44028|PCBP3-OT1|PCBP3OT
Full Name: poly(rC) binding protein 3
Gene Type: protein_coding
Species: Equus_caballus
Status: putative
Strand: Plus strand
Length: 327797 bases
Position: chr26:41978404-42306200
Accession: 8651
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSECAP00000010624	KH_1	PF00013.29	1.9e-55	1	3
ENSECAP00000010624	KH_1	PF00013.29	1.9e-55	2	3
ENSECAP00000010624	KH_1	PF00013.29	1.9e-55	3	3
ENSECAP00000026826	KH_1	PF00013.29	1.9e-55	1	3
ENSECAP00000026826	KH_1	PF00013.29	1.9e-55	2	3
ENSECAP00000026826	KH_1	PF00013.29	1.9e-55	3	3
ENSECAP00000032484	KH_1	PF00013.29	1.9e-55	1	3
ENSECAP00000032484	KH_1	PF00013.29	1.9e-55	2	3
ENSECAP00000032484	KH_1	PF00013.29	1.9e-55	3	3
ENSECAP00000040785	KH_1	PF00013.29	4.4e-55	1	3
ENSECAP00000040785	KH_1	PF00013.29	4.4e-55	2	3
ENSECAP00000040785	KH_1	PF00013.29	4.4e-55	3	3
ENSECAP00000038344	KH_1	PF00013.29	5.5e-55	1	3
ENSECAP00000038344	KH_1	PF00013.29	5.5e-55	2	3
ENSECAP00000038344	KH_1	PF00013.29	5.5e-55	3	3
ENSECAP00000010624	KH_2	PF07650.17	1.8e-15	1	1
ENSECAP00000026826	KH_2	PF07650.17	1.8e-15	1	1
ENSECAP00000032484	KH_2	PF07650.17	1.8e-15	1	1
ENSECAP00000040785	KH_2	PF07650.17	4.2e-15	1	1
ENSECAP00000038344	KH_2	PF07650.17	5.4e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSECAT00000040380	PCBP3-205	1281	-	ENSECAP00000026826	351 (aa)	-	-
ENSECAT00000052551	PCBP3-204	1311	-	ENSECAP00000032484	351 (aa)	-	-
ENSECAT00000059672	PCBP3-202	1266	-	ENSECAP00000040785	421 (aa)	-	-
ENSECAT00000060915	PCBP3-201	1341	-	ENSECAP00000038344	446 (aa)	-	-
ENSECAT00000013387	PCBP3-203	1218	-	ENSECAP00000010624	351 (aa)	-	F6QUR2

Gene Model

Click here to download ENSECAG00000012413's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSECAG00000012413's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSECAG00000012413	PCBP3	89	33.577	ENSECAG00000016797	IGF2BP3	65	31.395
ENSECAG00000012413	PCBP3	89	30.631	ENSECAG00000011500	FUBP3	66	41.270
ENSECAG00000012413	PCBP3	89	36.567	ENSECAG00000020685	IGF2BP2	61	36.567
ENSECAG00000012413	PCBP3	88	78.275	ENSECAG00000022389	-	100	78.275
ENSECAG00000012413	PCBP3	64	40.845	ENSECAG00000024041	NOVA2	51	40.845
ENSECAG00000012413	PCBP3	62	40.625	ENSECAG00000010867	FUBP1	60	40.625
ENSECAG00000012413	PCBP3	72	35.938	ENSECAG00000018305	KHSRP	53	35.938
ENSECAG00000012413	PCBP3	71	52.857	ENSECAG00000025104	HNRNPK	57	52.857
ENSECAG00000012413	PCBP3	86	35.345	ENSECAG00000009723	IGF2BP1	62	33.582
ENSECAG00000012413	PCBP3	71	42.254	ENSECAG00000037301	NOVA1	58	42.254
ENSECAG00000012413	PCBP3	85	63.787	ENSECAG00000024218	PCBP4	73	63.787

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSECAG00000012413	PCBP3	100	97.721	ENSG00000183570	PCBP3	100	97.721	Homo_sapiens
ENSECAG00000012413	PCBP3	91	75.851	ENSAPOG00000023735	zgc:110045	99	75.851	Acanthochromis_polyacanthus
ENSECAG00000012413	PCBP3	91	67.742	ENSACIG00000002577	zgc:110045	96	73.460	Amphilophus_citrinellus
ENSECAG00000012413	PCBP3	76	71.845	ENSAOCG00000005266	zgc:110045	97	71.845	Amphiprion_ocellaris
ENSECAG00000012413	PCBP3	88	76.358	ENSAPEG00000000729	zgc:110045	72	76.358	Amphiprion_percula
ENSECAG00000012413	PCBP3	85	72.889	ENSATEG00000011191	zgc:110045	65	72.889	Anabas_testudineus
ENSECAG00000012413	PCBP3	88	76.997	ENSACLG00000019285	zgc:110045	72	76.997	Astatotilapia_calliptera
ENSECAG00000012413	PCBP3	100	98.291	ENSBTAG00000030775	PCBP3	100	98.291	Bos_taurus
ENSECAG00000012413	PCBP3	100	92.722	ENSCAFG00000011907	PCBP3	100	92.722	Canis_familiaris
ENSECAG00000012413	PCBP3	99	91.008	ENSCHIG00000015841	PCBP3	98	91.008	Capra_hircus
ENSECAG00000012413	PCBP3	78	84.100	ENSTSYG00000005254	PCBP3	94	84.100	Carlito_syrichta
ENSECAG00000012413	PCBP3	99	73.973	ENSCAPG00000006767	PCBP3	95	72.414	Cavia_aperea
ENSECAG00000012413	PCBP3	100	92.453	ENSCPOG00000003648	PCBP3	100	92.453	Cavia_porcellus
ENSECAG00000012413	PCBP3	100	97.721	ENSCCAG00000024561	PCBP3	100	97.721	Cebus_capucinus
ENSECAG00000012413	PCBP3	100	97.436	ENSCATG00000038419	PCBP3	100	97.436	Cercocebus_atys
ENSECAG00000012413	PCBP3	100	93.261	ENSCLAG00000006667	PCBP3	100	93.261	Chinchilla_lanigera
ENSECAG00000012413	PCBP3	100	97.151	ENSCANG00000026757	PCBP3	100	97.151	Colobus_angolensis_palliatus
ENSECAG00000012413	PCBP3	100	92.453	ENSCGRG00001006836	Pcbp3	100	92.453	Cricetulus_griseus_chok1gshd
ENSECAG00000012413	PCBP3	100	92.453	ENSCGRG00000001837	Pcbp3	100	92.453	Cricetulus_griseus_crigri
ENSECAG00000012413	PCBP3	91	75.232	ENSCSEG00000010020	zgc:110045	99	75.232	Cynoglossus_semilaevis
ENSECAG00000012413	PCBP3	73	74.112	ENSCVAG00000004726	zgc:110045	89	74.112	Cyprinodon_variegatus
ENSECAG00000012413	PCBP3	75	78.404	ENSDARG00000057141	zgc:110045	93	78.404	Danio_rerio
ENSECAG00000012413	PCBP3	99	89.918	ENSDNOG00000049518	PCBP3	100	89.918	Dasypus_novemcinctus
ENSECAG00000012413	PCBP3	81	82.520	ENSDORG00000003640	Pcbp3	99	82.520	Dipodomys_ordii
ENSECAG00000012413	PCBP3	88	70.325	ENSEBUG00000009697	zgc:110045	99	76.382	Eptatretus_burgeri
ENSECAG00000012413	PCBP3	100	99.715	ENSEASG00005007068	PCBP3	100	99.715	Equus_asinus_asinus
ENSECAG00000012413	PCBP3	88	75.238	ENSELUG00000019784	zgc:110045	72	75.238	Esox_lucius
ENSECAG00000012413	PCBP3	100	98.291	ENSFCAG00000014812	PCBP3	100	98.291	Felis_catus
ENSECAG00000012413	PCBP3	100	97.151	ENSFDAG00000009117	PCBP3	100	97.151	Fukomys_damarensis
ENSECAG00000012413	PCBP3	87	66.071	ENSFHEG00000018838	-	92	73.632	Fundulus_heteroclitus
ENSECAG00000012413	PCBP3	89	72.783	ENSGMOG00000005953	zgc:110045	98	72.783	Gadus_morhua
ENSECAG00000012413	PCBP3	75	78.641	ENSGAFG00000017864	zgc:110045	91	78.641	Gambusia_affinis
ENSECAG00000012413	PCBP3	91	75.617	ENSGACG00000003044	zgc:110045	99	75.617	Gasterosteus_aculeatus
ENSECAG00000012413	PCBP3	100	97.436	ENSGGOG00000003683	PCBP3	100	97.436	Gorilla_gorilla
ENSECAG00000012413	PCBP3	91	76.471	ENSHBUG00000012495	zgc:110045	99	76.471	Haplochromis_burtoni
ENSECAG00000012413	PCBP3	99	92.120	ENSHGLG00000018620	PCBP3	99	92.120	Heterocephalus_glaber_female
ENSECAG00000012413	PCBP3	99	92.120	ENSHGLG00100013590	PCBP3	99	92.120	Heterocephalus_glaber_male
ENSECAG00000012413	PCBP3	89	67.619	ENSHCOG00000000818	zgc:110045	96	73.206	Hippocampus_comes
ENSECAG00000012413	PCBP3	75	75.980	ENSIPUG00000003932	zgc:110045	76	75.980	Ictalurus_punctatus
ENSECAG00000012413	PCBP3	100	92.722	ENSSTOG00000007178	PCBP3	100	92.722	Ictidomys_tridecemlineatus
ENSECAG00000012413	PCBP3	100	92.183	ENSJJAG00000021192	Pcbp3	100	92.183	Jaculus_jaculus
ENSECAG00000012413	PCBP3	72	80.952	ENSKMAG00000016179	-	90	80.952	Kryptolebias_marmoratus
ENSECAG00000012413	PCBP3	91	70.623	ENSLBEG00000023074	zgc:110045	99	70.623	Labrus_bergylta
ENSECAG00000012413	PCBP3	87	98.745	ENSLAFG00000020835	PCBP3	100	98.745	Loxodonta_africana
ENSECAG00000012413	PCBP3	100	97.436	ENSMFAG00000034574	PCBP3	100	97.436	Macaca_fascicularis
ENSECAG00000012413	PCBP3	100	97.436	ENSMMUG00000003825	PCBP3	100	97.436	Macaca_mulatta
ENSECAG00000012413	PCBP3	100	97.436	ENSMNEG00000035551	PCBP3	100	99.373	Macaca_nemestrina
ENSECAG00000012413	PCBP3	100	97.436	ENSMLEG00000038785	PCBP3	100	97.436	Mandrillus_leucophaeus
ENSECAG00000012413	PCBP3	87	76.282	ENSMAMG00000014389	zgc:110045	99	76.282	Mastacembelus_armatus
ENSECAG00000012413	PCBP3	88	76.997	ENSMZEG00005011785	zgc:110045	72	76.997	Maylandia_zebra
ENSECAG00000012413	PCBP3	100	92.453	ENSMAUG00000007036	Pcbp3	100	92.453	Mesocricetus_auratus
ENSECAG00000012413	PCBP3	100	97.151	ENSMICG00000012679	PCBP3	100	97.151	Microcebus_murinus
ENSECAG00000012413	PCBP3	100	92.183	ENSMOCG00000016127	Pcbp3	100	92.183	Microtus_ochrogaster
ENSECAG00000012413	PCBP3	69	80.556	ENSMMOG00000008399	zgc:110045	85	80.556	Mola_mola
ENSECAG00000012413	PCBP3	72	76.440	ENSMALG00000008763	zgc:110045	92	76.440	Monopterus_albus
ENSECAG00000012413	PCBP3	100	92.183	MGP_CAROLIEiJ_G0015475	Pcbp3	100	98.758	Mus_caroli
ENSECAG00000012413	PCBP3	100	91.914	ENSMUSG00000001120	Pcbp3	99	98.758	Mus_musculus
ENSECAG00000012413	PCBP3	100	92.183	MGP_PahariEiJ_G0030889	Pcbp3	100	98.758	Mus_pahari
ENSECAG00000012413	PCBP3	100	92.183	MGP_SPRETEiJ_G0016288	Pcbp3	100	98.758	Mus_spretus
ENSECAG00000012413	PCBP3	99	92.935	ENSMLUG00000003074	PCBP3	99	92.935	Myotis_lucifugus
ENSECAG00000012413	PCBP3	100	92.183	ENSNGAG00000005416	Pcbp3	100	92.183	Nannospalax_galili
ENSECAG00000012413	PCBP3	88	76.997	ENSNBRG00000017646	zgc:110045	72	76.997	Neolamprologus_brichardi
ENSECAG00000012413	PCBP3	100	98.006	ENSNLEG00000002639	PCBP3	100	98.006	Nomascus_leucogenys
ENSECAG00000012413	PCBP3	91	82.920	ENSMEUG00000012960	PCBP3	100	82.920	Notamacropus_eugenii
ENSECAG00000012413	PCBP3	99	91.057	ENSODEG00000012873	PCBP3	100	91.057	Octodon_degus
ENSECAG00000012413	PCBP3	88	76.997	ENSONIG00000010370	zgc:110045	76	76.997	Oreochromis_niloticus
ENSECAG00000012413	PCBP3	84	89.494	ENSOANG00000006265	PCBP3	90	89.494	Ornithorhynchus_anatinus
ENSECAG00000012413	PCBP3	88	76.358	ENSORLG00000014385	-	72	76.358	Oryzias_latipes
ENSECAG00000012413	PCBP3	88	76.038	ENSORLG00020003139	zgc:110045	86	73.684	Oryzias_latipes_hni
ENSECAG00000012413	PCBP3	88	76.038	ENSOMEG00000015459	-	72	76.038	Oryzias_melastigma
ENSECAG00000012413	PCBP3	100	91.328	ENSOARG00000012704	PCBP3	100	91.328	Ovis_aries
ENSECAG00000012413	PCBP3	100	97.436	ENSPPAG00000021940	PCBP3	100	97.436	Pan_paniscus
ENSECAG00000012413	PCBP3	100	98.291	ENSPPRG00000003933	PCBP3	100	98.291	Panthera_pardus
ENSECAG00000012413	PCBP3	100	82.768	ENSPTIG00000012038	PCBP3	100	83.761	Panthera_tigris_altaica
ENSECAG00000012413	PCBP3	99	74.212	ENSPTRG00000014010	PCBP3	99	74.212	Pan_troglodytes
ENSECAG00000012413	PCBP3	100	97.436	ENSPANG00000023631	PCBP3	100	97.436	Papio_anubis
ENSECAG00000012413	PCBP3	74	74.129	ENSPMGG00000022531	-	92	74.129	Periophthalmus_magnuspinnatus
ENSECAG00000012413	PCBP3	88	65.217	ENSPMGG00000021588	-	72	65.217	Periophthalmus_magnuspinnatus
ENSECAG00000012413	PCBP3	100	92.453	ENSPEMG00000000587	Pcbp3	100	92.453	Peromyscus_maniculatus_bairdii
ENSECAG00000012413	PCBP3	57	75.833	ENSPMAG00000004719	zgc:110045	94	75.833	Petromyzon_marinus
ENSECAG00000012413	PCBP3	89	75.786	ENSPFOG00000002348	zgc:110045	98	75.786	Poecilia_formosa
ENSECAG00000012413	PCBP3	76	73.460	ENSPLAG00000017488	zgc:110045	93	73.460	Poecilia_latipinna
ENSECAG00000012413	PCBP3	87	75.570	ENSPMEG00000012762	zgc:110045	91	78.641	Poecilia_mexicana
ENSECAG00000012413	PCBP3	88	76.358	ENSPREG00000001797	zgc:110045	94	76.887	Poecilia_reticulata
ENSECAG00000012413	PCBP3	81	89.453	ENSPPYG00000011525	-	94	89.453	Pongo_abelii
ENSECAG00000012413	PCBP3	87	70.940	ENSPCAG00000001454	PCBP3	100	70.940	Procavia_capensis
ENSECAG00000012413	PCBP3	100	97.436	ENSPCOG00000013797	PCBP3	100	97.436	Propithecus_coquereli
ENSECAG00000012413	PCBP3	82	89.130	ENSPVAG00000000832	PCBP3	83	89.130	Pteropus_vampyrus
ENSECAG00000012413	PCBP3	76	73.934	ENSPNYG00000004637	zgc:110045	96	73.934	Pundamilia_nyererei
ENSECAG00000012413	PCBP3	78	79.327	ENSPNAG00000004501	zgc:110045	93	79.327	Pygocentrus_nattereri
ENSECAG00000012413	PCBP3	100	97.436	ENSRROG00000034567	PCBP3	100	97.436	Rhinopithecus_roxellana
ENSECAG00000012413	PCBP3	100	97.721	ENSSBOG00000005789	PCBP3	100	97.721	Saimiri_boliviensis_boliviensis
ENSECAG00000012413	PCBP3	88	76.358	ENSSMAG00000013541	zgc:110045	91	75.926	Scophthalmus_maximus
ENSECAG00000012413	PCBP3	80	75.000	ENSSDUG00000019371	zgc:110045	66	75.000	Seriola_dumerili
ENSECAG00000012413	PCBP3	88	76.677	ENSSLDG00000021064	zgc:110045	72	76.677	Seriola_lalandi_dorsalis
ENSECAG00000012413	PCBP3	75	74.752	ENSSARG00000007629	-	100	74.752	Sorex_araneus
ENSECAG00000012413	PCBP3	91	76.161	ENSSPAG00000000563	zgc:110045	99	76.161	Stegastes_partitus
ENSECAG00000012413	PCBP3	100	98.291	ENSSSCG00000023041	PCBP3	100	98.291	Sus_scrofa
ENSECAG00000012413	PCBP3	71	83.333	ENSTRUG00000017789	zgc:110045	92	83.333	Takifugu_rubripes
ENSECAG00000012413	PCBP3	66	81.503	ENSTNIG00000003546	zgc:110045	85	81.503	Tetraodon_nigroviridis
ENSECAG00000012413	PCBP3	66	76.824	ENSTBEG00000011882	-	73	76.824	Tupaia_belangeri
ENSECAG00000012413	PCBP3	100	90.566	ENSUAMG00000006491	PCBP3	100	99.644	Ursus_americanus
ENSECAG00000012413	PCBP3	100	81.600	ENSUMAG00000025403	PCBP3	99	83.196	Ursus_maritimus
ENSECAG00000012413	PCBP3	99	88.366	ENSVVUG00000023862	PCBP3	96	87.637	Vulpes_vulpes
ENSECAG00000012413	PCBP3	64	80.247	ENSXCOG00000005968	zgc:110045	85	77.976	Xiphophorus_couchianus
ENSECAG00000012413	PCBP3	86	76.948	ENSXMAG00000008030	zgc:110045	72	76.038	Xiphophorus_maculatus