EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSECAG00000012479 (Gene tree)
Gene ID: 100052331
Gene Symbol: LARP4
Alias: -
Full Name: La ribonucleoprotein domain family member 4
Gene Type: protein_coding
Species: Equus_caballus
Status: putative
Strand: Plus strand
Length: 64465 bases
Position: chr6:68844878-68909342
Accession: 19587
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSECAP00000010552	La	PF05383.17	8.7e-17	1	1
ENSECAP00000031554	La	PF05383.17	8.7e-17	1	1
ENSECAP00000044245	La	PF05383.17	1e-16	1	1
ENSECAP00000010563	La	PF05383.17	1e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSECAT00000046092	-	2886	-	ENSECAP00000044245	722 (aa)	XP_005611229	UPI0003ACBB05
ENSECAT00000013317	-	2175	-	ENSECAP00000010563	724 (aa)	XP_005611228	F6S274
ENSECAT00000037379	-	2289	-	ENSECAP00000031554	661 (aa)	XP_023499310	UPI00071A034A
ENSECAT00000013306	-	2197	-	ENSECAP00000010552	661 (aa)	XP_023499310	F6S2X2

Gene Model

Click here to download ENSECAG00000012479's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSECAG00000012479's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSECAG00000012479	LARP4	99	39.193	ENSECAG00000024040	LARP4B	94	38.421

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSECAG00000012479	LARP4	100	91.390	ENSG00000161813	LARP4	100	97.600	Homo_sapiens
ENSECAG00000012479	LARP4	99	46.928	ENSAPOG00000021331	larp4ab	99	46.154	Acanthochromis_polyacanthus
ENSECAG00000012479	LARP4	100	94.554	ENSAMEG00000001275	LARP4	100	94.460	Ailuropoda_melanoleuca
ENSECAG00000012479	LARP4	52	62.141	ENSACIG00000001198	larp4aa	94	71.598	Amphilophus_citrinellus
ENSECAG00000012479	LARP4	99	45.982	ENSAOCG00000006387	larp4ab	99	45.266	Amphiprion_ocellaris
ENSECAG00000012479	LARP4	51	60.647	ENSAPEG00000015441	larp4ab	98	60.647	Amphiprion_percula
ENSECAG00000012479	LARP4	99	42.876	ENSATEG00000001018	larp4ab	99	43.173	Anabas_testudineus
ENSECAG00000012479	LARP4	99	72.997	ENSAPLG00000013661	LARP4	99	71.837	Anas_platyrhynchos
ENSECAG00000012479	LARP4	99	68.256	ENSACAG00000017133	LARP4	97	67.211	Anolis_carolinensis
ENSECAG00000012479	LARP4	100	91.390	ENSANAG00000029342	LARP4	97	94.118	Aotus_nancymaae
ENSECAG00000012479	LARP4	51	56.693	ENSACLG00000000777	larp4ab	99	56.693	Astatotilapia_calliptera
ENSECAG00000012479	LARP4	99	46.733	ENSAMXG00000001515	larp4ab	95	47.089	Astyanax_mexicanus
ENSECAG00000012479	LARP4	100	92.548	ENSBTAG00000017164	LARP4	100	92.507	Bos_taurus
ENSECAG00000012479	LARP4	100	90.634	ENSCJAG00000021131	LARP4	97	94.385	Callithrix_jacchus
ENSECAG00000012479	LARP4	100	95.008	ENSCAFG00000008174	LARP4	100	94.875	Canis_familiaris
ENSECAG00000012479	LARP4	100	95.008	ENSCAFG00020014554	LARP4	100	94.475	Canis_lupus_dingo
ENSECAG00000012479	LARP4	100	92.101	ENSCHIG00000025965	LARP4	100	92.098	Capra_hircus
ENSECAG00000012479	LARP4	100	92.598	ENSTSYG00000004342	LARP4	98	95.722	Carlito_syrichta
ENSECAG00000012479	LARP4	99	69.091	ENSCAPG00000012942	LARP4	100	68.531	Cavia_aperea
ENSECAG00000012479	LARP4	100	83.172	ENSCPOG00000020519	LARP4	100	83.172	Cavia_porcellus
ENSECAG00000012479	LARP4	100	89.793	ENSCCAG00000024439	LARP4	97	94.118	Cebus_capucinus
ENSECAG00000012479	LARP4	99	89.713	ENSCATG00000044528	LARP4	100	89.708	Cercocebus_atys
ENSECAG00000012479	LARP4	100	88.105	ENSCLAG00000001829	LARP4	100	88.105	Chinchilla_lanigera
ENSECAG00000012479	LARP4	57	92.164	ENSCHOG00000010490	-	58	92.164	Choloepus_hoffmanni
ENSECAG00000012479	LARP4	100	73.878	ENSCPBG00000019407	LARP4	91	73.605	Chrysemys_picta_bellii
ENSECAG00000012479	LARP4	100	92.000	ENSCANG00000029159	-	97	95.989	Colobus_angolensis_palliatus
ENSECAG00000012479	LARP4	100	82.345	ENSCANG00000033097	-	100	86.364	Colobus_angolensis_palliatus
ENSECAG00000012479	LARP4	100	86.405	ENSCGRG00001010818	Larp4	100	86.345	Cricetulus_griseus_chok1gshd
ENSECAG00000012479	LARP4	100	86.405	ENSCGRG00000009382	Larp4	100	86.351	Cricetulus_griseus_crigri
ENSECAG00000012479	LARP4	99	50.191	ENSCSEG00000001963	larp4aa	81	63.926	Cynoglossus_semilaevis
ENSECAG00000012479	LARP4	64	54.505	ENSCSEG00000003240	larp4ab	94	44.163	Cynoglossus_semilaevis
ENSECAG00000012479	LARP4	100	49.309	ENSDARG00000078401	larp4aa	95	48.325	Danio_rerio
ENSECAG00000012479	LARP4	100	48.564	ENSDARG00000074979	larp4ab	85	78.146	Danio_rerio
ENSECAG00000012479	LARP4	100	91.172	ENSDNOG00000038525	LARP4	100	91.172	Dasypus_novemcinctus
ENSECAG00000012479	LARP4	100	88.797	ENSDORG00000004013	Larp4	100	88.797	Dipodomys_ordii
ENSECAG00000012479	LARP4	73	83.774	ENSETEG00000011683	LARP4	73	83.774	Echinops_telfairi
ENSECAG00000012479	LARP4	70	42.077	ENSEBUG00000004426	LARP4	92	41.111	Eptatretus_burgeri
ENSECAG00000012479	LARP4	80	40.314	ENSEBUG00000010394	LARP4	87	39.965	Eptatretus_burgeri
ENSECAG00000012479	LARP4	100	97.277	ENSEASG00005004356	LARP4	100	100.000	Equus_asinus_asinus
ENSECAG00000012479	LARP4	76	100.000	ENSEEUG00000000316	LARP4	76	100.000	Erinaceus_europaeus
ENSECAG00000012479	LARP4	87	63.636	ENSELUG00000000395	larp4aa	79	73.361	Esox_lucius
ENSECAG00000012479	LARP4	74	76.549	ENSELUG00000018650	larp4ab	86	74.043	Esox_lucius
ENSECAG00000012479	LARP4	100	95.718	ENSFCAG00000031897	LARP4	100	95.718	Felis_catus
ENSECAG00000012479	LARP4	86	68.521	ENSFALG00000002114	LARP4	98	69.505	Ficedula_albicollis
ENSECAG00000012479	LARP4	100	88.138	ENSFDAG00000006406	-	100	88.138	Fukomys_damarensis
ENSECAG00000012479	LARP4	99	44.195	ENSFHEG00000013854	larp4ab	99	43.857	Fundulus_heteroclitus
ENSECAG00000012479	LARP4	99	49.502	ENSGMOG00000008246	larp4aa	95	48.816	Gadus_morhua
ENSECAG00000012479	LARP4	95	71.473	ENSGALG00000042122	LARP4	93	70.513	Gallus_gallus
ENSECAG00000012479	LARP4	99	44.841	ENSGAFG00000021777	larp4ab	99	44.312	Gambusia_affinis
ENSECAG00000012479	LARP4	99	44.947	ENSGACG00000000680	larp4ab	99	45.377	Gasterosteus_aculeatus
ENSECAG00000012479	LARP4	99	51.778	ENSGACG00000008381	larp4aa	99	64.628	Gasterosteus_aculeatus
ENSECAG00000012479	LARP4	100	72.381	ENSGAGG00000006969	LARP4	100	72.109	Gopherus_agassizii
ENSECAG00000012479	LARP4	100	85.650	ENSGGOG00000015230	LARP4	99	94.340	Gorilla_gorilla
ENSECAG00000012479	LARP4	52	62.205	ENSHBUG00000023074	larp4aa	50	62.205	Haplochromis_burtoni
ENSECAG00000012479	LARP4	91	87.443	ENSHGLG00000005513	-	100	87.443	Heterocephalus_glaber_female
ENSECAG00000012479	LARP4	94	81.260	ENSHGLG00000013875	-	100	80.129	Heterocephalus_glaber_female
ENSECAG00000012479	LARP4	62	74.834	ENSHGLG00000010979	-	93	76.644	Heterocephalus_glaber_female
ENSECAG00000012479	LARP4	100	82.019	ENSHGLG00100011678	-	100	81.492	Heterocephalus_glaber_male
ENSECAG00000012479	LARP4	100	87.620	ENSHGLG00100016984	-	100	87.620	Heterocephalus_glaber_male
ENSECAG00000012479	LARP4	62	74.834	ENSHGLG00100002832	-	93	76.644	Heterocephalus_glaber_male
ENSECAG00000012479	LARP4	99	41.987	ENSHCOG00000020857	larp4ab	99	41.854	Hippocampus_comes
ENSECAG00000012479	LARP4	100	48.736	ENSHCOG00000015951	larp4aa	95	48.895	Hippocampus_comes
ENSECAG00000012479	LARP4	99	48.579	ENSIPUG00000007514	larp4aa	95	48.450	Ictalurus_punctatus
ENSECAG00000012479	LARP4	100	47.263	ENSIPUG00000021659	larp4ab	100	47.193	Ictalurus_punctatus
ENSECAG00000012479	LARP4	100	91.692	ENSSTOG00000003553	LARP4	100	91.286	Ictidomys_tridecemlineatus
ENSECAG00000012479	LARP4	50	70.732	ENSJJAG00000014649	-	95	89.048	Jaculus_jaculus
ENSECAG00000012479	LARP4	99	45.372	ENSKMAG00000018556	larp4ab	99	45.263	Kryptolebias_marmoratus
ENSECAG00000012479	LARP4	99	43.473	ENSLBEG00000019306	larp4ab	99	43.814	Labrus_bergylta
ENSECAG00000012479	LARP4	99	59.912	ENSLACG00000019090	LARP4	99	58.501	Latimeria_chalumnae
ENSECAG00000012479	LARP4	99	53.582	ENSLOCG00000007113	larp4ab	95	52.701	Lepisosteus_oculatus
ENSECAG00000012479	LARP4	100	92.749	ENSLAFG00000005160	LARP4	100	92.138	Loxodonta_africana
ENSECAG00000012479	LARP4	99	92.284	ENSMFAG00000043681	LARP4	97	95.989	Macaca_fascicularis
ENSECAG00000012479	LARP4	100	91.382	ENSMMUG00000008172	LARP4	97	95.989	Macaca_mulatta
ENSECAG00000012479	LARP4	99	92.436	ENSMNEG00000034602	LARP4	100	89.924	Macaca_nemestrina
ENSECAG00000012479	LARP4	85	85.802	ENSMNEG00000037799	-	93	85.802	Macaca_nemestrina
ENSECAG00000012479	LARP4	100	92.000	ENSMLEG00000039661	LARP4	97	95.989	Mandrillus_leucophaeus
ENSECAG00000012479	LARP4	99	44.256	ENSMAMG00000002616	larp4ab	99	44.737	Mastacembelus_armatus
ENSECAG00000012479	LARP4	51	56.430	ENSMZEG00005007771	larp4ab	99	56.430	Maylandia_zebra
ENSECAG00000012479	LARP4	95	71.205	ENSMGAG00000010598	LARP4	93	70.085	Meleagris_gallopavo
ENSECAG00000012479	LARP4	100	87.311	ENSMICG00000030156	-	100	85.517	Microcebus_murinus
ENSECAG00000012479	LARP4	95	91.284	ENSMICG00000012388	-	99	91.284	Microcebus_murinus
ENSECAG00000012479	LARP4	100	86.707	ENSMOCG00000020635	Larp4	100	86.584	Microtus_ochrogaster
ENSECAG00000012479	LARP4	99	48.736	ENSMMOG00000004785	larp4aa	95	47.668	Mola_mola
ENSECAG00000012479	LARP4	100	43.941	ENSMMOG00000021861	larp4ab	92	53.719	Mola_mola
ENSECAG00000012479	LARP4	95	77.063	MGP_CAROLIEiJ_G0020281	Larp4	85	91.212	Mus_caroli
ENSECAG00000012479	LARP4	100	86.858	ENSMUSG00000023025	Larp4	100	86.858	Mus_musculus
ENSECAG00000012479	LARP4	100	87.915	MGP_PahariEiJ_G0020284	Larp4	100	87.586	Mus_pahari
ENSECAG00000012479	LARP4	100	94.402	ENSMPUG00000008706	LARP4	97	94.313	Mustela_putorius_furo
ENSECAG00000012479	LARP4	100	91.252	ENSMLUG00000012513	-	100	91.047	Myotis_lucifugus
ENSECAG00000012479	LARP4	100	85.952	ENSNGAG00000001577	-	100	85.517	Nannospalax_galili
ENSECAG00000012479	LARP4	51	55.467	ENSNBRG00000015675	larp4ab	99	55.467	Neolamprologus_brichardi
ENSECAG00000012479	LARP4	100	92.145	ENSNLEG00000017798	LARP4	97	95.187	Nomascus_leucogenys
ENSECAG00000012479	LARP4	67	76.305	ENSOPRG00000004592	-	80	76.305	Ochotona_princeps
ENSECAG00000012479	LARP4	100	84.441	ENSODEG00000009770	LARP4	100	84.401	Octodon_degus
ENSECAG00000012479	LARP4	100	48.508	ENSONIG00000011895	larp4aa	99	48.834	Oreochromis_niloticus
ENSECAG00000012479	LARP4	100	44.075	ENSONIG00000019124	larp4ab	100	44.297	Oreochromis_niloticus
ENSECAG00000012479	LARP4	73	72.407	ENSOANG00000004373	LARP4	97	72.407	Ornithorhynchus_anatinus
ENSECAG00000012479	LARP4	100	88.973	ENSOCUG00000021417	-	100	88.828	Oryctolagus_cuniculus
ENSECAG00000012479	LARP4	100	89.910	ENSOCUG00000026872	-	100	87.758	Oryctolagus_cuniculus
ENSECAG00000012479	LARP4	99	50.354	ENSORLG00000006758	larp4aa	95	48.755	Oryzias_latipes
ENSECAG00000012479	LARP4	99	50.776	ENSORLG00015002292	larp4aa	95	49.150	Oryzias_latipes_hsok
ENSECAG00000012479	LARP4	99	50.508	ENSOMEG00000019749	larp4aa	97	66.391	Oryzias_melastigma
ENSECAG00000012479	LARP4	71	89.768	ENSOGAG00000001415	LARP4	100	89.768	Otolemur_garnettii
ENSECAG00000012479	LARP4	100	92.399	ENSOARG00000017702	LARP4	100	91.689	Ovis_aries
ENSECAG00000012479	LARP4	62	74.614	ENSPPAG00000039122	-	96	79.319	Pan_paniscus
ENSECAG00000012479	LARP4	92	96.141	ENSPPAG00000035100	LARP4	97	94.652	Pan_paniscus
ENSECAG00000012479	LARP4	100	95.856	ENSPPRG00000004522	LARP4	100	95.856	Panthera_pardus
ENSECAG00000012479	LARP4	100	95.856	ENSPTIG00000015617	LARP4	100	95.856	Panthera_tigris_altaica
ENSECAG00000012479	LARP4	100	91.692	ENSPTRG00000004935	LARP4	97	94.920	Pan_troglodytes
ENSECAG00000012479	LARP4	62	74.172	ENSPTRG00000045907	-	98	81.301	Pan_troglodytes
ENSECAG00000012479	LARP4	99	92.436	ENSPANG00000022964	LARP4	97	95.989	Papio_anubis
ENSECAG00000012479	LARP4	100	49.938	ENSPKIG00000005950	larp4ab	100	49.189	Paramormyrops_kingsleyae
ENSECAG00000012479	LARP4	99	70.746	ENSPSIG00000015867	LARP4	99	70.411	Pelodiscus_sinensis
ENSECAG00000012479	LARP4	51	55.703	ENSPMGG00000002719	larp4ab	98	56.233	Periophthalmus_magnuspinnatus
ENSECAG00000012479	LARP4	99	80.468	ENSPEMG00000018433	Larp4	94	86.526	Peromyscus_maniculatus_bairdii
ENSECAG00000012479	LARP4	100	78.474	ENSPCIG00000000384	LARP4	100	78.065	Phascolarctos_cinereus
ENSECAG00000012479	LARP4	99	50.275	ENSPFOG00000013148	larp4aa	100	48.795	Poecilia_formosa
ENSECAG00000012479	LARP4	99	45.273	ENSPFOG00000009764	larp4ab	99	45.093	Poecilia_formosa
ENSECAG00000012479	LARP4	99	45.022	ENSPLAG00000008502	larp4ab	99	44.828	Poecilia_latipinna
ENSECAG00000012479	LARP4	99	50.412	ENSPLAG00000013626	larp4aa	95	49.872	Poecilia_latipinna
ENSECAG00000012479	LARP4	99	49.796	ENSPMEG00000014271	larp4aa	95	49.744	Poecilia_mexicana
ENSECAG00000012479	LARP4	99	45.194	ENSPMEG00000002720	larp4ab	99	44.636	Poecilia_mexicana
ENSECAG00000012479	LARP4	51	59.467	ENSPREG00000016263	larp4ab	96	59.467	Poecilia_reticulata
ENSECAG00000012479	LARP4	99	52.282	ENSPREG00000022597	larp4aa	95	50.449	Poecilia_reticulata
ENSECAG00000012479	LARP4	71	92.442	ENSPPYG00000004512	-	100	92.442	Pongo_abelii
ENSECAG00000012479	LARP4	100	83.686	ENSPCAG00000003671	LARP4	99	83.582	Procavia_capensis
ENSECAG00000012479	LARP4	87	95.161	ENSPCOG00000026291	LARP4	98	93.156	Propithecus_coquereli
ENSECAG00000012479	LARP4	100	84.115	ENSPVAG00000016840	LARP4	91	84.305	Pteropus_vampyrus
ENSECAG00000012479	LARP4	99	48.784	ENSPNAG00000014478	larp4ab	100	48.329	Pygocentrus_nattereri
ENSECAG00000012479	LARP4	96	50.515	ENSPNAG00000024770	larp4aa	94	50.813	Pygocentrus_nattereri
ENSECAG00000012479	LARP4	87	97.097	ENSRBIG00000038857	-	99	94.558	Rhinopithecus_bieti
ENSECAG00000012479	LARP4	89	83.465	ENSRBIG00000036890	-	100	83.465	Rhinopithecus_bieti
ENSECAG00000012479	LARP4	100	81.793	ENSRROG00000025487	-	100	83.727	Rhinopithecus_roxellana
ENSECAG00000012479	LARP4	99	92.436	ENSRROG00000042764	-	99	94.785	Rhinopithecus_roxellana
ENSECAG00000012479	LARP4	100	89.793	ENSSBOG00000026650	LARP4	97	93.850	Saimiri_boliviensis_boliviensis
ENSECAG00000012479	LARP4	51	83.965	ENSSHAG00000013246	-	99	84.071	Sarcophilus_harrisii
ENSECAG00000012479	LARP4	98	50.000	ENSSFOG00015014096	larp4ab	100	48.271	Scleropages_formosus
ENSECAG00000012479	LARP4	100	50.262	ENSSFOG00015003868	larp4aa	100	50.195	Scleropages_formosus
ENSECAG00000012479	LARP4	99	46.454	ENSSMAG00000002838	larp4ab	99	46.545	Scophthalmus_maximus
ENSECAG00000012479	LARP4	99	45.300	ENSSDUG00000006655	larp4ab	99	44.909	Seriola_dumerili
ENSECAG00000012479	LARP4	99	45.850	ENSSLDG00000001791	larp4ab	99	45.763	Seriola_lalandi_dorsalis
ENSECAG00000012479	LARP4	100	84.871	ENSSARG00000012469	LARP4	100	84.392	Sorex_araneus
ENSECAG00000012479	LARP4	95	68.794	ENSSPUG00000016552	LARP4	93	69.220	Sphenodon_punctatus
ENSECAG00000012479	LARP4	99	46.762	ENSSPAG00000002172	larp4ab	99	45.844	Stegastes_partitus
ENSECAG00000012479	LARP4	99	49.364	ENSSPAG00000007222	larp4aa	99	62.567	Stegastes_partitus
ENSECAG00000012479	LARP4	100	93.807	ENSSSCG00000028516	LARP4	100	93.807	Sus_scrofa
ENSECAG00000012479	LARP4	100	69.357	ENSTGUG00000003479	LARP4	100	69.809	Taeniopygia_guttata
ENSECAG00000012479	LARP4	70	51.631	ENSTRUG00000007206	larp4ab	99	44.251	Takifugu_rubripes
ENSECAG00000012479	LARP4	99	44.652	ENSTNIG00000014571	larp4ab	99	44.519	Tetraodon_nigroviridis
ENSECAG00000012479	LARP4	99	49.290	ENSTNIG00000015109	larp4aa	50	61.097	Tetraodon_nigroviridis
ENSECAG00000012479	LARP4	99	79.558	ENSTBEG00000005167	LARP4	100	79.558	Tupaia_belangeri
ENSECAG00000012479	LARP4	100	93.495	ENSTTRG00000003764	LARP4	99	92.818	Tursiops_truncatus
ENSECAG00000012479	LARP4	72	95.000	ENSUAMG00000013764	LARP4	100	97.297	Ursus_americanus
ENSECAG00000012479	LARP4	100	94.890	ENSUMAG00000008473	LARP4	100	94.890	Ursus_maritimus
ENSECAG00000012479	LARP4	100	93.093	ENSVPAG00000010136	LARP4	100	91.973	Vicugna_pacos
ENSECAG00000012479	LARP4	100	94.705	ENSVVUG00000024717	LARP4	100	94.606	Vulpes_vulpes
ENSECAG00000012479	LARP4	99	61.022	ENSXETG00000007283	larp4	100	60.432	Xenopus_tropicalis
ENSECAG00000012479	LARP4	51	58.201	ENSXCOG00000019635	larp4ab	97	58.158	Xiphophorus_couchianus
ENSECAG00000012479	LARP4	99	49.443	ENSXCOG00000006387	larp4aa	95	48.387	Xiphophorus_couchianus
ENSECAG00000012479	LARP4	99	51.247	ENSXMAG00000010519	larp4aa	95	50.193	Xiphophorus_maculatus
ENSECAG00000012479	LARP4	99	46.358	ENSXMAG00000002156	larp4ab	99	45.828	Xiphophorus_maculatus