EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSECAG00000012667 (Gene tree)
Gene ID: 100066233
Gene Symbol: RBFOX1
Alias: -
Full Name: RNA binding fox-1 homolog 1
Gene Type: protein_coding
Species: Equus_caballus
Status: putative
Strand: Minus strand
Length: 361360 bases
Position: chr13:37169592-37530951
Accession: 22225
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSECAP00000039463	Fox-1_C	PF12414.8	1.8e-42	1	1
ENSECAP00000010993	Fox-1_C	PF12414.8	1.8e-40	1	1
ENSECAP00000027366	Fox-1_C	PF12414.8	1.9e-40	1	1
ENSECAP00000035049	Fox-1_C	PF12414.8	1.9e-40	1	1
ENSECAP00000034288	Fox-1_C	PF12414.8	2e-40	1	1
ENSECAP00000045163	Fox-1_C	PF12414.8	2e-40	1	1
ENSECAP00000011035	Fox-1_C	PF12414.8	2.6e-40	1	1
ENSECAP00000010926	Fox-1_C	PF12414.8	3.2e-38	1	1
ENSECAP00000010926	RRM_1	PF00076.22	3.9e-18	1	1
ENSECAP00000011035	RRM_1	PF00076.22	4.2e-18	1	1
ENSECAP00000010993	RRM_1	PF00076.22	4.4e-18	1	1
ENSECAP00000035049	RRM_1	PF00076.22	4.5e-18	1	1
ENSECAP00000027366	RRM_1	PF00076.22	4.5e-18	1	1
ENSECAP00000034288	RRM_1	PF00076.22	4.6e-18	1	1
ENSECAP00000045163	RRM_1	PF00076.22	4.9e-18	1	1
ENSECAP00000039463	RRM_1	PF00076.22	5.3e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSECAT00000013815	-	1248	-	ENSECAP00000010993	415 (aa)	-	F6T0W2
ENSECAT00000049002	-	1565	-	ENSECAP00000039463	421 (aa)	-	-
ENSECAT00000042426	-	1302	-	ENSECAP00000034288	433 (aa)	-	-
ENSECAT00000013864	-	1131	-	ENSECAP00000011035	376 (aa)	-	F6ZVB7
ENSECAT00000058882	-	1565	-	ENSECAP00000035049	421 (aa)	-	-
ENSECAT00000013739	-	1188	-	ENSECAP00000010926	395 (aa)	-	F6Q266
ENSECAT00000065201	-	1314	-	ENSECAP00000045163	437 (aa)	-	-
ENSECAT00000058083	-	1260	-	ENSECAP00000027366	419 (aa)	-	-

Gene Model

Click here to download ENSECAG00000012667's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSECAG00000012667's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSECAG00000012667	RBFOX1	77	68.902	ENSECAG00000023811	RBFOX3	100	70.554
ENSECAG00000012667	RBFOX1	83	68.750	ENSECAG00000018923	RBFOX2	82	66.307

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSECAG00000012667	RBFOX1	100	98.734	ENSG00000078328	RBFOX1	100	98.942	Homo_sapiens
ENSECAG00000012667	RBFOX1	96	76.596	ENSAPOG00000003197	rbfox1	100	76.359	Acanthochromis_polyacanthus
ENSECAG00000012667	RBFOX1	63	96.800	ENSAMEG00000008605	RBFOX1	100	96.800	Ailuropoda_melanoleuca
ENSECAG00000012667	RBFOX1	63	64.865	ENSACIG00000005478	rbfox1	68	64.865	Amphilophus_citrinellus
ENSECAG00000012667	RBFOX1	80	70.662	ENSAOCG00000008283	rbfox1	99	70.347	Amphiprion_ocellaris
ENSECAG00000012667	RBFOX1	88	70.765	ENSAPEG00000010636	rbfox1	100	71.129	Amphiprion_percula
ENSECAG00000012667	RBFOX1	80	69.279	ENSATEG00000007513	rbfox1	100	71.914	Anabas_testudineus
ENSECAG00000012667	RBFOX1	91	92.612	ENSAPLG00000013263	RBFOX1	98	92.386	Anas_platyrhynchos
ENSECAG00000012667	RBFOX1	91	85.789	ENSACAG00000004013	RBFOX1	98	86.005	Anolis_carolinensis
ENSECAG00000012667	RBFOX1	98	98.378	ENSANAG00000029527	RBFOX1	98	98.724	Aotus_nancymaae
ENSECAG00000012667	RBFOX1	61	87.059	ENSAMXG00000002431	rbfox1	81	79.859	Astyanax_mexicanus
ENSECAG00000012667	RBFOX1	100	99.202	ENSBTAG00000007210	RBFOX1	100	99.202	Bos_taurus
ENSECAG00000012667	RBFOX1	98	98.519	ENSCJAG00000017351	RBFOX1	97	98.519	Callithrix_jacchus
ENSECAG00000012667	RBFOX1	100	99.494	ENSCAFG00000019082	RBFOX1	100	99.494	Canis_familiaris
ENSECAG00000012667	RBFOX1	100	85.823	ENSCAFG00020024881	RBFOX1	99	86.076	Canis_lupus_dingo
ENSECAG00000012667	RBFOX1	100	99.241	ENSCHIG00000023549	RBFOX1	100	99.241	Capra_hircus
ENSECAG00000012667	RBFOX1	97	98.904	ENSTSYG00000005334	RBFOX1	100	98.715	Carlito_syrichta
ENSECAG00000012667	RBFOX1	98	98.272	ENSCAPG00000017669	RBFOX1	100	97.172	Cavia_aperea
ENSECAG00000012667	RBFOX1	98	98.272	ENSCPOG00000011314	RBFOX1	99	96.923	Cavia_porcellus
ENSECAG00000012667	RBFOX1	98	98.519	ENSCCAG00000023031	RBFOX1	97	98.519	Cebus_capucinus
ENSECAG00000012667	RBFOX1	100	98.734	ENSCATG00000033816	RBFOX1	97	98.519	Cercocebus_atys
ENSECAG00000012667	RBFOX1	100	98.404	ENSCLAG00000012761	RBFOX1	100	98.404	Chinchilla_lanigera
ENSECAG00000012667	RBFOX1	100	99.202	ENSCSAG00000008739	RBFOX1	100	99.202	Chlorocebus_sabaeus
ENSECAG00000012667	RBFOX1	98	76.296	ENSCHOG00000012843	RBFOX1	97	76.296	Choloepus_hoffmanni
ENSECAG00000012667	RBFOX1	100	94.415	ENSCPBG00000026626	RBFOX1	100	94.415	Chrysemys_picta_bellii
ENSECAG00000012667	RBFOX1	98	98.519	ENSCANG00000033125	RBFOX1	97	98.519	Colobus_angolensis_palliatus
ENSECAG00000012667	RBFOX1	98	97.284	ENSCGRG00001013729	Rbfox1	97	97.284	Cricetulus_griseus_chok1gshd
ENSECAG00000012667	RBFOX1	98	97.284	ENSCGRG00000003272	Rbfox1	97	97.284	Cricetulus_griseus_crigri
ENSECAG00000012667	RBFOX1	88	69.091	ENSCSEG00000008840	rbfox1	100	70.789	Cynoglossus_semilaevis
ENSECAG00000012667	RBFOX1	90	80.106	ENSDARG00000014746	rbfox1	100	86.829	Danio_rerio
ENSECAG00000012667	RBFOX1	91	96.561	ENSDNOG00000043612	RBFOX1	98	94.335	Dasypus_novemcinctus
ENSECAG00000012667	RBFOX1	91	93.684	ENSDORG00000010024	Rbfox1	100	93.059	Dipodomys_ordii
ENSECAG00000012667	RBFOX1	98	78.272	ENSETEG00000003771	RBFOX1	97	78.272	Echinops_telfairi
ENSECAG00000012667	RBFOX1	100	99.759	ENSEASG00005011599	RBFOX1	100	99.759	Equus_asinus_asinus
ENSECAG00000012667	RBFOX1	75	69.767	ENSELUG00000013096	rbfox1	97	69.767	Esox_lucius
ENSECAG00000012667	RBFOX1	100	99.241	ENSFCAG00000025322	RBFOX1	100	99.202	Felis_catus
ENSECAG00000012667	RBFOX1	86	94.737	ENSFALG00000004027	RBFOX1	100	92.515	Ficedula_albicollis
ENSECAG00000012667	RBFOX1	98	98.765	ENSFDAG00000007388	RBFOX1	97	98.765	Fukomys_damarensis
ENSECAG00000012667	RBFOX1	98	94.565	ENSGALG00000034325	RBFOX1	100	92.105	Gallus_gallus
ENSECAG00000012667	RBFOX1	100	92.658	ENSGAGG00000023681	RBFOX1	100	92.857	Gopherus_agassizii
ENSECAG00000012667	RBFOX1	98	98.519	ENSGGOG00000016871	-	97	98.519	Gorilla_gorilla
ENSECAG00000012667	RBFOX1	100	98.670	ENSHGLG00000016944	RBFOX1	100	98.670	Heterocephalus_glaber_female
ENSECAG00000012667	RBFOX1	100	98.670	ENSHGLG00100003272	RBFOX1	100	98.670	Heterocephalus_glaber_male
ENSECAG00000012667	RBFOX1	85	68.693	ENSHCOG00000016419	rbfox1	91	72.121	Hippocampus_comes
ENSECAG00000012667	RBFOX1	100	81.383	ENSIPUG00000015215	rbfox1	100	82.500	Ictalurus_punctatus
ENSECAG00000012667	RBFOX1	100	97.606	ENSSTOG00000000322	RBFOX1	100	97.606	Ictidomys_tridecemlineatus
ENSECAG00000012667	RBFOX1	98	94.321	ENSJJAG00000002575	Rbfox1	97	94.321	Jaculus_jaculus
ENSECAG00000012667	RBFOX1	91	72.280	ENSLBEG00000014659	rbfox1	98	72.796	Labrus_bergylta
ENSECAG00000012667	RBFOX1	92	83.896	ENSLOCG00000006675	rbfox1	100	83.960	Lepisosteus_oculatus
ENSECAG00000012667	RBFOX1	71	99.322	ENSLAFG00000011480	RBFOX1	100	99.351	Loxodonta_africana
ENSECAG00000012667	RBFOX1	98	98.272	ENSMFAG00000036447	RBFOX1	97	98.272	Macaca_fascicularis
ENSECAG00000012667	RBFOX1	98	98.916	ENSMMUG00000003458	RBFOX1	99	98.916	Macaca_mulatta
ENSECAG00000012667	RBFOX1	100	98.936	ENSMNEG00000032034	RBFOX1	97	98.272	Macaca_nemestrina
ENSECAG00000012667	RBFOX1	98	98.519	ENSMLEG00000015382	RBFOX1	97	98.519	Mandrillus_leucophaeus
ENSECAG00000012667	RBFOX1	88	72.632	ENSMAMG00000003142	rbfox1	100	74.933	Mastacembelus_armatus
ENSECAG00000012667	RBFOX1	77	89.003	ENSMGAG00000008606	RBFOX1	98	88.811	Meleagris_gallopavo
ENSECAG00000012667	RBFOX1	90	56.032	ENSMAUG00000020570	Rbfox1	96	55.181	Mesocricetus_auratus
ENSECAG00000012667	RBFOX1	100	98.481	ENSMICG00000034286	RBFOX1	100	98.481	Microcebus_murinus
ENSECAG00000012667	RBFOX1	98	97.284	ENSMOCG00000020932	Rbfox1	100	95.844	Microtus_ochrogaster
ENSECAG00000012667	RBFOX1	85	70.093	ENSMMOG00000009716	rbfox1	86	72.671	Mola_mola
ENSECAG00000012667	RBFOX1	94	97.458	ENSMODG00000005826	RBFOX1	100	97.458	Monodelphis_domestica
ENSECAG00000012667	RBFOX1	99	74.941	ENSMALG00000003337	rbfox1	100	73.924	Monopterus_albus
ENSECAG00000012667	RBFOX1	100	96.809	MGP_CAROLIEiJ_G0020427	Rbfox1	97	97.531	Mus_caroli
ENSECAG00000012667	RBFOX1	98	97.284	ENSMUSG00000008658	Rbfox1	100	100.000	Mus_musculus
ENSECAG00000012667	RBFOX1	100	96.543	MGP_PahariEiJ_G0016135	Rbfox1	97	97.531	Mus_pahari
ENSECAG00000012667	RBFOX1	100	96.277	MGP_SPRETEiJ_G0021321	Rbfox1	97	97.037	Mus_spretus
ENSECAG00000012667	RBFOX1	100	96.962	ENSMPUG00000014822	RBFOX1	100	96.962	Mustela_putorius_furo
ENSECAG00000012667	RBFOX1	71	96.949	ENSMLUG00000015896	RBFOX1	100	97.078	Myotis_lucifugus
ENSECAG00000012667	RBFOX1	98	98.025	ENSNGAG00000023276	Rbfox1	100	96.658	Nannospalax_galili
ENSECAG00000012667	RBFOX1	94	58.993	ENSNBRG00000011084	rbfox1	95	62.129	Neolamprologus_brichardi
ENSECAG00000012667	RBFOX1	98	98.272	ENSNLEG00000010017	-	97	98.272	Nomascus_leucogenys
ENSECAG00000012667	RBFOX1	98	80.494	ENSMEUG00000012525	RBFOX1	97	80.494	Notamacropus_eugenii
ENSECAG00000012667	RBFOX1	98	79.506	ENSOPRG00000006199	-	97	79.506	Ochotona_princeps
ENSECAG00000012667	RBFOX1	98	97.531	ENSODEG00000013166	RBFOX1	97	97.531	Octodon_degus
ENSECAG00000012667	RBFOX1	100	96.277	ENSOANG00000002379	RBFOX1	100	96.277	Ornithorhynchus_anatinus
ENSECAG00000012667	RBFOX1	58	97.696	ENSOCUG00000001205	-	97	97.248	Oryctolagus_cuniculus
ENSECAG00000012667	RBFOX1	91	96.296	ENSOGAG00000025535	RBFOX1	98	96.667	Otolemur_garnettii
ENSECAG00000012667	RBFOX1	65	86.885	ENSOARG00000005135	RBFOX1	100	85.259	Ovis_aries
ENSECAG00000012667	RBFOX1	98	98.108	ENSPPAG00000036238	-	100	99.180	Pan_paniscus
ENSECAG00000012667	RBFOX1	98	99.012	ENSPPRG00000006546	RBFOX1	97	99.012	Panthera_pardus
ENSECAG00000012667	RBFOX1	98	80.759	ENSPTIG00000021154	RBFOX1	100	83.969	Panthera_tigris_altaica
ENSECAG00000012667	RBFOX1	98	98.519	ENSPTRG00000007744	RBFOX1	97	98.519	Pan_troglodytes
ENSECAG00000012667	RBFOX1	98	98.519	ENSPANG00000026500	RBFOX1	97	98.519	Papio_anubis
ENSECAG00000012667	RBFOX1	98	81.671	ENSPKIG00000009667	-	99	82.210	Paramormyrops_kingsleyae
ENSECAG00000012667	RBFOX1	80	83.721	ENSPKIG00000019353	rbfox1	89	85.574	Paramormyrops_kingsleyae
ENSECAG00000012667	RBFOX1	91	92.962	ENSPSIG00000006523	RBFOX1	98	92.602	Pelodiscus_sinensis
ENSECAG00000012667	RBFOX1	98	97.531	ENSPEMG00000017607	Rbfox1	97	97.531	Peromyscus_maniculatus_bairdii
ENSECAG00000012667	RBFOX1	71	92.509	ENSPCIG00000026887	RBFOX1	100	91.781	Phascolarctos_cinereus
ENSECAG00000012667	RBFOX1	100	96.709	ENSPPYG00000007079	-	100	96.709	Pongo_abelii
ENSECAG00000012667	RBFOX1	91	89.683	ENSPCAG00000002630	RBFOX1	100	89.683	Procavia_capensis
ENSECAG00000012667	RBFOX1	98	98.519	ENSPCOG00000025687	RBFOX1	97	98.519	Propithecus_coquereli
ENSECAG00000012667	RBFOX1	98	95.309	ENSPVAG00000013467	RBFOX1	97	95.309	Pteropus_vampyrus
ENSECAG00000012667	RBFOX1	88	78.646	ENSPNAG00000023109	rbfox1	100	79.947	Pygocentrus_nattereri
ENSECAG00000012667	RBFOX1	100	94.430	ENSRNOG00000002827	Rbfox1	97	97.548	Rattus_norvegicus
ENSECAG00000012667	RBFOX1	100	99.202	ENSRBIG00000044478	RBFOX1	100	99.202	Rhinopithecus_bieti
ENSECAG00000012667	RBFOX1	100	98.734	ENSRROG00000044411	RBFOX1	100	98.734	Rhinopithecus_roxellana
ENSECAG00000012667	RBFOX1	100	98.987	ENSSBOG00000033726	RBFOX1	100	98.987	Saimiri_boliviensis_boliviensis
ENSECAG00000012667	RBFOX1	91	91.270	ENSSHAG00000009257	RBFOX1	100	90.423	Sarcophilus_harrisii
ENSECAG00000012667	RBFOX1	89	72.533	ENSSFOG00015023675	rbfox1	93	87.778	Scleropages_formosus
ENSECAG00000012667	RBFOX1	88	68.717	ENSSFOG00015009955	-	89	68.320	Scleropages_formosus
ENSECAG00000012667	RBFOX1	96	76.777	ENSSMAG00000015505	rbfox1	100	76.540	Scophthalmus_maximus
ENSECAG00000012667	RBFOX1	90	75.000	ENSSDUG00000016413	rbfox1	100	74.474	Seriola_dumerili
ENSECAG00000012667	RBFOX1	85	70.497	ENSSLDG00000009353	rbfox1	98	73.130	Seriola_lalandi_dorsalis
ENSECAG00000012667	RBFOX1	85	80.435	ENSSPUG00000009732	RBFOX1	87	83.901	Sphenodon_punctatus
ENSECAG00000012667	RBFOX1	93	73.008	ENSSPAG00000009723	rbfox1	100	74.807	Stegastes_partitus
ENSECAG00000012667	RBFOX1	100	99.241	ENSSSCG00000007917	RBFOX1	100	99.153	Sus_scrofa
ENSECAG00000012667	RBFOX1	91	92.838	ENSTGUG00000004562	RBFOX1	100	92.821	Taeniopygia_guttata
ENSECAG00000012667	RBFOX1	91	73.604	ENSTRUG00000020940	rbfox1	99	74.680	Takifugu_rubripes
ENSECAG00000012667	RBFOX1	63	57.325	ENSTNIG00000002567	rbfox1	100	58.917	Tetraodon_nigroviridis
ENSECAG00000012667	RBFOX1	78	89.655	ENSTBEG00000009169	-	78	89.655	Tupaia_belangeri
ENSECAG00000012667	RBFOX1	98	99.012	ENSTTRG00000005700	RBFOX1	97	99.012	Tursiops_truncatus
ENSECAG00000012667	RBFOX1	100	94.684	ENSUAMG00000024633	RBFOX1	100	94.167	Ursus_americanus
ENSECAG00000012667	RBFOX1	100	85.823	ENSUMAG00000003579	RBFOX1	99	85.823	Ursus_maritimus
ENSECAG00000012667	RBFOX1	78	100.000	ENSVPAG00000001284	RBFOX1	78	100.000	Vicugna_pacos
ENSECAG00000012667	RBFOX1	100	98.936	ENSVVUG00000017311	RBFOX1	100	98.936	Vulpes_vulpes