EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSECAG00000012894 (Gene tree)
Gene ID: 100056924
Gene Symbol: STAU1
Alias: -
Full Name: staufen double-stranded RNA binding protein 1
Gene Type: protein_coding
Species: Equus_caballus
Status: putative
Strand: Minus strand
Length: 54327 bases
Position: chr22:38319842-38374168
Accession: 23669
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSECAP00000034828	dsrm	PF00035.26	9e-46	1	4
ENSECAP00000034828	dsrm	PF00035.26	9e-46	2	4
ENSECAP00000034828	dsrm	PF00035.26	9e-46	3	4
ENSECAP00000034828	dsrm	PF00035.26	9e-46	4	4
ENSECAP00000044509	dsrm	PF00035.26	9e-46	1	4
ENSECAP00000044509	dsrm	PF00035.26	9e-46	2	4
ENSECAP00000044509	dsrm	PF00035.26	9e-46	3	4
ENSECAP00000044509	dsrm	PF00035.26	9e-46	4	4
ENSECAP00000037169	dsrm	PF00035.26	2.1e-41	1	4
ENSECAP00000037169	dsrm	PF00035.26	2.1e-41	2	4
ENSECAP00000037169	dsrm	PF00035.26	2.1e-41	3	4
ENSECAP00000037169	dsrm	PF00035.26	2.1e-41	4	4
ENSECAP00000026999	dsrm	PF00035.26	9.9e-41	1	4
ENSECAP00000026999	dsrm	PF00035.26	9.9e-41	2	4
ENSECAP00000026999	dsrm	PF00035.26	9.9e-41	3	4
ENSECAP00000026999	dsrm	PF00035.26	9.9e-41	4	4
ENSECAP00000033890	dsrm	PF00035.26	4.5e-33	1	3
ENSECAP00000033890	dsrm	PF00035.26	4.5e-33	2	3
ENSECAP00000033890	dsrm	PF00035.26	4.5e-33	3	3
ENSECAP00000011108	dsrm	PF00035.26	6.4e-33	1	3
ENSECAP00000011108	dsrm	PF00035.26	6.4e-33	2	3
ENSECAP00000011108	dsrm	PF00035.26	6.4e-33	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSECAT00000043468	-	2373	-	ENSECAP00000044509	671 (aa)	XP_023482472	UPI0004BD082E
ENSECAT00000042276	-	3171	-	ENSECAP00000034828	671 (aa)	XP_023482472	UPI0004BD082E
ENSECAT00000057556	-	2027	-	ENSECAP00000037169	623 (aa)	-	UPI0003ACAC7F
ENSECAT00000044803	-	2046	-	ENSECAP00000026999	584 (aa)	-	-
ENSECAT00000041645	-	3028	-	ENSECAP00000033890	675 (aa)	-	-
ENSECAT00000013949	-	2889	-	ENSECAP00000011108	577 (aa)	XP_023482475	F7BJQ7

Gene Model

Click here to download ENSECAG00000012894's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSECAG00000012894's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSECAG00000012894	STAU1	93	49.823	ENSECAG00000000260	STAU2	92	52.254

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSECAG00000012894	STAU1	100	97.400	ENSG00000124214	STAU1	100	97.400	Homo_sapiens
ENSECAG00000012894	STAU1	98	71.675	ENSAPOG00000017260	stau1	93	72.179	Acanthochromis_polyacanthus
ENSECAG00000012894	STAU1	99	96.552	ENSAMEG00000013681	STAU1	95	96.552	Ailuropoda_melanoleuca
ENSECAG00000012894	STAU1	99	75.149	ENSACIG00000015918	stau1	96	75.794	Amphilophus_citrinellus
ENSECAG00000012894	STAU1	98	72.712	ENSAOCG00000012224	stau1	93	73.261	Amphiprion_ocellaris
ENSECAG00000012894	STAU1	98	72.712	ENSAPEG00000012308	stau1	93	73.261	Amphiprion_percula
ENSECAG00000012894	STAU1	99	74.951	ENSATEG00000024600	stau1	99	74.951	Anabas_testudineus
ENSECAG00000012894	STAU1	99	88.650	ENSAPLG00000010527	STAU1	94	88.650	Anas_platyrhynchos
ENSECAG00000012894	STAU1	99	88.477	ENSACAG00000015909	STAU1	95	88.477	Anolis_carolinensis
ENSECAG00000012894	STAU1	100	96.569	ENSANAG00000032714	STAU1	100	96.569	Aotus_nancymaae
ENSECAG00000012894	STAU1	99	73.010	ENSACLG00000012270	stau1	96	73.010	Astatotilapia_calliptera
ENSECAG00000012894	STAU1	95	72.777	ENSAMXG00000016812	stau1	99	71.375	Astyanax_mexicanus
ENSECAG00000012894	STAU1	100	96.707	ENSBTAG00000000241	STAU1	100	96.707	Bos_taurus
ENSECAG00000012894	STAU1	100	97.574	ENSCJAG00000016233	STAU1	100	97.574	Callithrix_jacchus
ENSECAG00000012894	STAU1	100	97.920	ENSCAFG00000011347	STAU1	100	96.755	Canis_familiaris
ENSECAG00000012894	STAU1	100	96.755	ENSCAFG00020017123	STAU1	100	96.755	Canis_lupus_dingo
ENSECAG00000012894	STAU1	100	96.534	ENSCHIG00000001799	-	100	96.534	Capra_hircus
ENSECAG00000012894	STAU1	100	94.499	ENSTSYG00000036179	-	100	94.499	Carlito_syrichta
ENSECAG00000012894	STAU1	86	92.137	ENSCAPG00000017041	STAU1	100	92.137	Cavia_aperea
ENSECAG00000012894	STAU1	85	90.505	ENSCPOG00000005566	STAU1	100	90.505	Cavia_porcellus
ENSECAG00000012894	STAU1	100	96.741	ENSCCAG00000034339	STAU1	100	96.741	Cebus_capucinus
ENSECAG00000012894	STAU1	100	97.920	ENSCATG00000028474	STAU1	100	97.920	Cercocebus_atys
ENSECAG00000012894	STAU1	85	94.747	ENSCLAG00000006516	-	100	94.747	Chinchilla_lanigera
ENSECAG00000012894	STAU1	86	77.912	ENSCLAG00000002784	-	100	77.912	Chinchilla_lanigera
ENSECAG00000012894	STAU1	98	97.379	ENSCSAG00000014986	STAU1	100	97.379	Chlorocebus_sabaeus
ENSECAG00000012894	STAU1	100	96.540	ENSCHOG00000001511	STAU1	100	96.540	Choloepus_hoffmanni
ENSECAG00000012894	STAU1	99	88.806	ENSCPBG00000026741	STAU1	96	88.806	Chrysemys_picta_bellii
ENSECAG00000012894	STAU1	100	97.747	ENSCANG00000039220	STAU1	100	97.747	Colobus_angolensis_palliatus
ENSECAG00000012894	STAU1	85	89.495	ENSCGRG00001013453	Stau1	100	89.495	Cricetulus_griseus_chok1gshd
ENSECAG00000012894	STAU1	85	89.495	ENSCGRG00000007216	Stau1	100	89.495	Cricetulus_griseus_crigri
ENSECAG00000012894	STAU1	99	65.226	ENSCSEG00000000792	stau1	96	64.766	Cynoglossus_semilaevis
ENSECAG00000012894	STAU1	98	70.307	ENSCVAG00000005906	stau1	99	70.937	Cyprinodon_variegatus
ENSECAG00000012894	STAU1	99	73.541	ENSDARG00000044182	stau1	96	73.541	Danio_rerio
ENSECAG00000012894	STAU1	100	97.059	ENSDNOG00000014933	STAU1	98	97.059	Dasypus_novemcinctus
ENSECAG00000012894	STAU1	98	91.002	ENSDORG00000030220	Stau1	100	91.002	Dipodomys_ordii
ENSECAG00000012894	STAU1	88	96.552	ENSETEG00000018235	STAU1	88	97.037	Echinops_telfairi
ENSECAG00000012894	STAU1	100	99.220	ENSEASG00005023343	STAU1	100	99.220	Equus_asinus_asinus
ENSECAG00000012894	STAU1	90	100.000	ENSEEUG00000014344	STAU1	80	100.000	Erinaceus_europaeus
ENSECAG00000012894	STAU1	98	70.798	ENSELUG00000002529	stau1	94	73.214	Esox_lucius
ENSECAG00000012894	STAU1	100	97.747	ENSFCAG00000001447	STAU1	100	97.747	Felis_catus
ENSECAG00000012894	STAU1	99	88.102	ENSFALG00000012940	STAU1	96	88.102	Ficedula_albicollis
ENSECAG00000012894	STAU1	85	93.535	ENSFDAG00000014119	-	100	93.535	Fukomys_damarensis
ENSECAG00000012894	STAU1	86	71.142	ENSFDAG00000020837	-	100	71.831	Fukomys_damarensis
ENSECAG00000012894	STAU1	99	73.581	ENSFHEG00000013517	stau1	99	73.518	Fundulus_heteroclitus
ENSECAG00000012894	STAU1	99	62.158	ENSGMOG00000016850	stau1	96	62.158	Gadus_morhua
ENSECAG00000012894	STAU1	99	90.119	ENSGALG00000004736	STAU1	96	90.119	Gallus_gallus
ENSECAG00000012894	STAU1	97	72.552	ENSGAFG00000010437	stau1	96	73.973	Gambusia_affinis
ENSECAG00000012894	STAU1	99	72.885	ENSGACG00000001352	stau1	96	71.322	Gasterosteus_aculeatus
ENSECAG00000012894	STAU1	99	89.307	ENSGAGG00000009825	STAU1	96	89.307	Gopherus_agassizii
ENSECAG00000012894	STAU1	100	91.468	ENSGGOG00000025351	STAU1	100	96.438	Gorilla_gorilla
ENSECAG00000012894	STAU1	99	73.204	ENSHBUG00000023668	stau1	96	73.204	Haplochromis_burtoni
ENSECAG00000012894	STAU1	85	95.501	ENSHGLG00000008730	STAU1	100	95.501	Heterocephalus_glaber_female
ENSECAG00000012894	STAU1	85	95.501	ENSHGLG00100000098	STAU1	100	95.501	Heterocephalus_glaber_male
ENSECAG00000012894	STAU1	96	69.718	ENSHCOG00000018461	stau1	92	70.031	Hippocampus_comes
ENSECAG00000012894	STAU1	94	74.741	ENSIPUG00000023725	stau1	95	74.741	Ictalurus_punctatus
ENSECAG00000012894	STAU1	85	95.297	ENSSTOG00000003634	STAU1	100	95.297	Ictidomys_tridecemlineatus
ENSECAG00000012894	STAU1	85	92.843	ENSJJAG00000020032	Stau1	100	92.843	Jaculus_jaculus
ENSECAG00000012894	STAU1	97	71.201	ENSKMAG00000007135	stau1	93	72.941	Kryptolebias_marmoratus
ENSECAG00000012894	STAU1	99	69.871	ENSLBEG00000020172	stau1	96	69.871	Labrus_bergylta
ENSECAG00000012894	STAU1	99	84.118	ENSLACG00000016157	STAU1	96	84.118	Latimeria_chalumnae
ENSECAG00000012894	STAU1	99	78.220	ENSLOCG00000003134	stau1	96	77.383	Lepisosteus_oculatus
ENSECAG00000012894	STAU1	88	95.088	ENSLAFG00000003238	STAU1	100	95.088	Loxodonta_africana
ENSECAG00000012894	STAU1	100	97.920	ENSMFAG00000040931	STAU1	100	98.897	Macaca_fascicularis
ENSECAG00000012894	STAU1	100	91.980	ENSMMUG00000002302	STAU1	100	98.897	Macaca_mulatta
ENSECAG00000012894	STAU1	100	97.920	ENSMNEG00000033821	STAU1	100	97.920	Macaca_nemestrina
ENSECAG00000012894	STAU1	100	97.747	ENSMLEG00000031383	STAU1	100	97.747	Mandrillus_leucophaeus
ENSECAG00000012894	STAU1	99	73.485	ENSMAMG00000017586	stau1	99	73.120	Mastacembelus_armatus
ENSECAG00000012894	STAU1	99	70.501	ENSMZEG00005015605	stau1	96	70.501	Maylandia_zebra
ENSECAG00000012894	STAU1	99	88.845	ENSMGAG00000004719	STAU1	94	88.845	Meleagris_gallopavo
ENSECAG00000012894	STAU1	85	90.303	ENSMAUG00000013846	Stau1	100	90.303	Mesocricetus_auratus
ENSECAG00000012894	STAU1	100	95.026	ENSMICG00000001995	STAU1	100	95.026	Microcebus_murinus
ENSECAG00000012894	STAU1	85	91.002	ENSMOCG00000018743	Stau1	100	90.909	Microtus_ochrogaster
ENSECAG00000012894	STAU1	94	71.403	ENSMMOG00000015455	stau1	99	73.695	Mola_mola
ENSECAG00000012894	STAU1	99	93.124	ENSMODG00000016276	STAU1	99	93.124	Monodelphis_domestica
ENSECAG00000012894	STAU1	99	72.744	ENSMALG00000000045	stau1	96	72.388	Monopterus_albus
ENSECAG00000012894	STAU1	85	91.207	MGP_CAROLIEiJ_G0024699	Stau1	100	91.207	Mus_caroli
ENSECAG00000012894	STAU1	85	90.593	ENSMUSG00000039536	Stau1	100	90.593	Mus_musculus
ENSECAG00000012894	STAU1	85	90.798	MGP_PahariEiJ_G0026141	Stau1	100	90.798	Mus_pahari
ENSECAG00000012894	STAU1	85	90.184	MGP_SPRETEiJ_G0025619	Stau1	100	90.184	Mus_spretus
ENSECAG00000012894	STAU1	99	97.228	ENSMPUG00000017581	STAU1	99	97.228	Mustela_putorius_furo
ENSECAG00000012894	STAU1	100	96.534	ENSMLUG00000008407	STAU1	98	96.534	Myotis_lucifugus
ENSECAG00000012894	STAU1	85	92.929	ENSNGAG00000007108	Stau1	100	92.929	Nannospalax_galili
ENSECAG00000012894	STAU1	99	73.204	ENSNBRG00000017596	stau1	96	73.204	Neolamprologus_brichardi
ENSECAG00000012894	STAU1	100	97.054	ENSNLEG00000006955	STAU1	100	97.054	Nomascus_leucogenys
ENSECAG00000012894	STAU1	99	85.689	ENSMEUG00000003263	STAU1	91	96.875	Notamacropus_eugenii
ENSECAG00000012894	STAU1	99	92.927	ENSOPRG00000014569	STAU1	100	92.927	Ochotona_princeps
ENSECAG00000012894	STAU1	98	94.758	ENSODEG00000006523	STAU1	100	94.758	Octodon_degus
ENSECAG00000012894	STAU1	99	73.398	ENSONIG00000004152	stau1	95	73.398	Oreochromis_niloticus
ENSECAG00000012894	STAU1	99	88.872	ENSOANG00000006394	STAU1	96	88.872	Ornithorhynchus_anatinus
ENSECAG00000012894	STAU1	100	94.695	ENSOCUG00000006214	STAU1	100	94.695	Oryctolagus_cuniculus
ENSECAG00000012894	STAU1	99	70.037	ENSOMEG00000002388	stau1	96	70.037	Oryzias_melastigma
ENSECAG00000012894	STAU1	100	95.678	ENSOGAG00000002127	STAU1	98	95.678	Otolemur_garnettii
ENSECAG00000012894	STAU1	85	65.070	ENSOGAG00000028222	-	99	65.524	Otolemur_garnettii
ENSECAG00000012894	STAU1	100	96.572	ENSOARG00000012204	STAU1	100	96.572	Ovis_aries
ENSECAG00000012894	STAU1	100	91.638	ENSPPAG00000032023	STAU1	100	96.438	Pan_paniscus
ENSECAG00000012894	STAU1	100	97.574	ENSPPRG00000003436	STAU1	100	97.782	Panthera_pardus
ENSECAG00000012894	STAU1	100	97.574	ENSPTIG00000011768	STAU1	100	97.574	Panthera_tigris_altaica
ENSECAG00000012894	STAU1	100	91.638	ENSPTRG00000023130	STAU1	100	96.438	Pan_troglodytes
ENSECAG00000012894	STAU1	100	97.747	ENSPANG00000020560	STAU1	100	97.747	Papio_anubis
ENSECAG00000012894	STAU1	97	73.380	ENSPKIG00000024588	stau1	93	73.457	Paramormyrops_kingsleyae
ENSECAG00000012894	STAU1	99	88.855	ENSPSIG00000010731	STAU1	95	88.855	Pelodiscus_sinensis
ENSECAG00000012894	STAU1	96	73.638	ENSPMGG00000018553	stau1	99	72.470	Periophthalmus_magnuspinnatus
ENSECAG00000012894	STAU1	85	90.101	ENSPEMG00000022045	Stau1	100	90.101	Peromyscus_maniculatus_bairdii
ENSECAG00000012894	STAU1	100	92.593	ENSPCIG00000023269	STAU1	100	92.593	Phascolarctos_cinereus
ENSECAG00000012894	STAU1	99	74.023	ENSPFOG00000017253	stau1	96	74.023	Poecilia_formosa
ENSECAG00000012894	STAU1	65	68.668	ENSPLAG00000014829	stau1	96	69.713	Poecilia_latipinna
ENSECAG00000012894	STAU1	94	73.333	ENSPMEG00000007495	stau1	94	73.333	Poecilia_mexicana
ENSECAG00000012894	STAU1	99	73.438	ENSPREG00000003477	stau1	96	73.438	Poecilia_reticulata
ENSECAG00000012894	STAU1	100	97.054	ENSPPYG00000011111	STAU1	100	97.054	Pongo_abelii
ENSECAG00000012894	STAU1	94	88.603	ENSPCAG00000002459	STAU1	100	88.603	Procavia_capensis
ENSECAG00000012894	STAU1	100	96.014	ENSPCOG00000027746	STAU1	100	96.014	Propithecus_coquereli
ENSECAG00000012894	STAU1	86	96.939	ENSPVAG00000015019	STAU1	86	97.656	Pteropus_vampyrus
ENSECAG00000012894	STAU1	99	73.204	ENSPNYG00000014436	stau1	96	73.204	Pundamilia_nyererei
ENSECAG00000012894	STAU1	99	73.114	ENSPNAG00000011323	stau1	96	73.308	Pygocentrus_nattereri
ENSECAG00000012894	STAU1	85	90.101	ENSRNOG00000007781	Stau1	100	90.101	Rattus_norvegicus
ENSECAG00000012894	STAU1	86	96.414	ENSRBIG00000037345	STAU1	100	96.774	Rhinopithecus_bieti
ENSECAG00000012894	STAU1	100	97.920	ENSRROG00000039008	STAU1	100	97.920	Rhinopithecus_roxellana
ENSECAG00000012894	STAU1	100	96.741	ENSSBOG00000034448	STAU1	100	96.741	Saimiri_boliviensis_boliviensis
ENSECAG00000012894	STAU1	99	93.543	ENSSHAG00000009492	STAU1	99	93.253	Sarcophilus_harrisii
ENSECAG00000012894	STAU1	97	75.309	ENSSFOG00015021497	stau1	99	70.351	Scleropages_formosus
ENSECAG00000012894	STAU1	99	72.201	ENSSMAG00000017410	stau1	96	72.201	Scophthalmus_maximus
ENSECAG00000012894	STAU1	98	73.057	ENSSDUG00000019439	stau1	93	73.725	Seriola_dumerili
ENSECAG00000012894	STAU1	98	73.057	ENSSLDG00000025040	stau1	93	73.725	Seriola_lalandi_dorsalis
ENSECAG00000012894	STAU1	64	92.941	ENSSARG00000010389	-	64	95.556	Sorex_araneus
ENSECAG00000012894	STAU1	99	87.834	ENSSPUG00000017983	STAU1	100	87.816	Sphenodon_punctatus
ENSECAG00000012894	STAU1	98	72.712	ENSSPAG00000019275	stau1	93	73.416	Stegastes_partitus
ENSECAG00000012894	STAU1	100	98.267	ENSSSCG00000027444	STAU1	100	98.267	Sus_scrofa
ENSECAG00000012894	STAU1	99	87.761	ENSTGUG00000008784	STAU1	93	87.761	Taeniopygia_guttata
ENSECAG00000012894	STAU1	98	72.396	ENSTRUG00000005837	stau1	93	75.538	Takifugu_rubripes
ENSECAG00000012894	STAU1	98	71.157	ENSTNIG00000014732	stau1	95	71.628	Tetraodon_nigroviridis
ENSECAG00000012894	STAU1	91	94.260	ENSTBEG00000009404	STAU1	91	94.260	Tupaia_belangeri
ENSECAG00000012894	STAU1	100	86.655	ENSTTRG00000004285	STAU1	92	100.000	Tursiops_truncatus
ENSECAG00000012894	STAU1	98	94.831	ENSUAMG00000025449	STAU1	100	94.831	Ursus_americanus
ENSECAG00000012894	STAU1	77	93.651	ENSUMAG00000024475	STAU1	89	93.651	Ursus_maritimus
ENSECAG00000012894	STAU1	100	98.094	ENSVPAG00000001313	STAU1	100	98.094	Vicugna_pacos
ENSECAG00000012894	STAU1	100	96.903	ENSVVUG00000022325	STAU1	100	96.903	Vulpes_vulpes
ENSECAG00000012894	STAU1	99	82.840	ENSXETG00000001783	stau1	96	83.037	Xenopus_tropicalis
ENSECAG00000012894	STAU1	59	69.653	ENSXCOG00000008804	stau1	98	71.762	Xiphophorus_couchianus
ENSECAG00000012894	STAU1	99	73.973	ENSXMAG00000016175	stau1	96	73.973	Xiphophorus_maculatus