EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSECAG00000013206 (Gene tree)
Gene ID: 100063896
Gene Symbol: URB1
Alias: -
Full Name: URB1 ribosome biogenesis 1 homolog (S. cerevisiae)
Gene Type: protein_coding
Species: Equus_caballus
Status: putative
Strand: Minus strand
Length: 69047 bases
Position: chr26:30362062-30431108
Accession: 57214
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSECAP00000024027	Npa1	PF11707.8	2.7e-85	1	1
ENSECAP00000028220	Npa1	PF11707.8	2.9e-85	1	1
ENSECAP00000011261	Npa1	PF11707.8	3e-85	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSECAT00000014121	-	7188	XM_001498676	ENSECAP00000011261	2270 (aa)	XP_001498726	F7AG19
ENSECAT00000037831	-	6990	-	ENSECAP00000028220	2204 (aa)	-	-
ENSECAT00000060624	-	6396	-	ENSECAP00000024027	2131 (aa)	-	-

Gene Model

Click here to download ENSECAG00000013206's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSECAG00000013206's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSECAG00000013206	URB1	99	88.713	ENSG00000142207	URB1	97	88.889	Homo_sapiens
ENSECAG00000013206	URB1	99	55.263	ENSAPOG00000020308	urb1	91	55.263	Acanthochromis_polyacanthus
ENSECAG00000013206	URB1	99	92.635	ENSAMEG00000011998	URB1	97	91.827	Ailuropoda_melanoleuca
ENSECAG00000013206	URB1	95	45.085	ENSACIG00000003248	urb1	92	56.490	Amphilophus_citrinellus
ENSECAG00000013206	URB1	99	45.480	ENSAOCG00000010364	urb1	96	45.349	Amphiprion_ocellaris
ENSECAG00000013206	URB1	99	47.506	ENSAPEG00000010758	urb1	99	52.321	Amphiprion_percula
ENSECAG00000013206	URB1	99	51.732	ENSATEG00000011790	urb1	92	51.732	Anabas_testudineus
ENSECAG00000013206	URB1	97	67.108	ENSAPLG00000012791	URB1	96	67.470	Anas_platyrhynchos
ENSECAG00000013206	URB1	99	63.830	ENSACAG00000002817	URB1	95	63.942	Anolis_carolinensis
ENSECAG00000013206	URB1	100	88.801	ENSANAG00000024617	URB1	97	88.889	Aotus_nancymaae
ENSECAG00000013206	URB1	99	55.846	ENSACLG00000024865	urb1	95	55.846	Astatotilapia_calliptera
ENSECAG00000013206	URB1	97	48.253	ENSAMXG00000012306	urb1	95	48.630	Astyanax_mexicanus
ENSECAG00000013206	URB1	99	89.310	ENSBTAG00000012412	URB1	97	88.724	Bos_taurus
ENSECAG00000013206	URB1	100	88.510	ENSCJAG00000009118	URB1	96	88.510	Callithrix_jacchus
ENSECAG00000013206	URB1	100	87.948	ENSCAFG00000008892	URB1	99	87.948	Canis_familiaris
ENSECAG00000013206	URB1	100	87.760	ENSCAFG00020025987	-	99	87.760	Canis_lupus_dingo
ENSECAG00000013206	URB1	100	88.306	ENSCAFG00020025994	-	99	88.306	Canis_lupus_dingo
ENSECAG00000013206	URB1	100	90.000	ENSCHIG00000015645	URB1	97	89.330	Capra_hircus
ENSECAG00000013206	URB1	99	88.953	ENSTSYG00000013286	URB1	97	88.953	Carlito_syrichta
ENSECAG00000013206	URB1	98	83.557	ENSCAPG00000015589	URB1	96	83.557	Cavia_aperea
ENSECAG00000013206	URB1	99	88.161	ENSCPOG00000006748	URB1	97	88.161	Cavia_porcellus
ENSECAG00000013206	URB1	100	89.450	ENSCCAG00000021299	URB1	97	88.889	Cebus_capucinus
ENSECAG00000013206	URB1	100	89.140	ENSCATG00000042630	URB1	97	89.229	Cercocebus_atys
ENSECAG00000013206	URB1	99	86.441	ENSCLAG00000005262	URB1	97	86.538	Chinchilla_lanigera
ENSECAG00000013206	URB1	100	84.814	ENSCSAG00000009584	URB1	97	84.814	Chlorocebus_sabaeus
ENSECAG00000013206	URB1	99	68.249	ENSCPBG00000006454	URB1	97	68.249	Chrysemys_picta_bellii
ENSECAG00000013206	URB1	100	89.078	ENSCANG00000031088	URB1	97	89.078	Colobus_angolensis_palliatus
ENSECAG00000013206	URB1	98	82.840	ENSCGRG00001010616	Urb1	97	81.922	Cricetulus_griseus_chok1gshd
ENSECAG00000013206	URB1	97	82.809	ENSCGRG00000015840	Urb1	97	82.809	Cricetulus_griseus_crigri
ENSECAG00000013206	URB1	97	52.768	ENSCSEG00000012616	urb1	94	52.886	Cynoglossus_semilaevis
ENSECAG00000013206	URB1	96	55.930	ENSCVAG00000009076	urb1	97	55.930	Cyprinodon_variegatus
ENSECAG00000013206	URB1	98	55.114	ENSDARG00000060308	urb1	95	55.227	Danio_rerio
ENSECAG00000013206	URB1	85	81.340	ENSDNOG00000015586	URB1	99	81.150	Dasypus_novemcinctus
ENSECAG00000013206	URB1	99	86.130	ENSDORG00000006735	Urb1	94	87.802	Dipodomys_ordii
ENSECAG00000013206	URB1	92	81.455	ENSETEG00000009080	URB1	92	81.455	Echinops_telfairi
ENSECAG00000013206	URB1	100	97.665	ENSEASG00005007711	URB1	100	97.665	Equus_asinus_asinus
ENSECAG00000013206	URB1	60	90.000	ENSEEUG00000003626	-	58	90.000	Erinaceus_europaeus
ENSECAG00000013206	URB1	98	47.245	ENSELUG00000020516	urb1	90	55.913	Esox_lucius
ENSECAG00000013206	URB1	100	90.482	ENSFCAG00000002177	URB1	99	87.856	Felis_catus
ENSECAG00000013206	URB1	98	51.543	ENSFALG00000004636	URB1	95	65.233	Ficedula_albicollis
ENSECAG00000013206	URB1	99	87.729	ENSFDAG00000007288	URB1	92	87.729	Fukomys_damarensis
ENSECAG00000013206	URB1	99	49.943	ENSFHEG00000000202	urb1	92	54.905	Fundulus_heteroclitus
ENSECAG00000013206	URB1	91	51.508	ENSGMOG00000001838	urb1	94	46.851	Gadus_morhua
ENSECAG00000013206	URB1	99	66.476	ENSGALG00000015887	URB1	96	66.476	Gallus_gallus
ENSECAG00000013206	URB1	99	45.956	ENSGAFG00000020694	urb1	98	52.442	Gambusia_affinis
ENSECAG00000013206	URB1	98	55.958	ENSGACG00000011703	urb1	91	55.958	Gasterosteus_aculeatus
ENSECAG00000013206	URB1	99	67.873	ENSGAGG00000022544	URB1	97	67.873	Gopherus_agassizii
ENSECAG00000013206	URB1	100	88.713	ENSGGOG00000000285	URB1	97	88.889	Gorilla_gorilla
ENSECAG00000013206	URB1	99	55.846	ENSHBUG00000001904	urb1	95	55.846	Haplochromis_burtoni
ENSECAG00000013206	URB1	99	84.607	ENSHGLG00000004907	URB1	97	84.607	Heterocephalus_glaber_female
ENSECAG00000013206	URB1	99	87.400	ENSHGLG00100010749	URB1	97	87.400	Heterocephalus_glaber_male
ENSECAG00000013206	URB1	75	51.451	ENSHCOG00000018683	urb1	97	52.418	Hippocampus_comes
ENSECAG00000013206	URB1	97	48.506	ENSIPUG00000014721	urb1	94	48.506	Ictalurus_punctatus
ENSECAG00000013206	URB1	99	88.876	ENSSTOG00000004539	URB1	97	88.876	Ictidomys_tridecemlineatus
ENSECAG00000013206	URB1	97	54.788	ENSKMAG00000006001	urb1	95	54.051	Kryptolebias_marmoratus
ENSECAG00000013206	URB1	97	42.112	ENSLBEG00000027208	urb1	99	52.197	Labrus_bergylta
ENSECAG00000013206	URB1	99	56.081	ENSLACG00000017059	URB1	95	56.081	Latimeria_chalumnae
ENSECAG00000013206	URB1	99	59.050	ENSLOCG00000009190	urb1	95	59.050	Lepisosteus_oculatus
ENSECAG00000013206	URB1	99	86.230	ENSLAFG00000010407	URB1	97	86.230	Loxodonta_africana
ENSECAG00000013206	URB1	100	89.027	ENSMFAG00000034391	URB1	94	89.116	Macaca_fascicularis
ENSECAG00000013206	URB1	100	88.801	ENSMMUG00000010295	URB1	97	88.889	Macaca_mulatta
ENSECAG00000013206	URB1	100	85.537	ENSMNEG00000032981	URB1	97	85.617	Macaca_nemestrina
ENSECAG00000013206	URB1	100	88.914	ENSMLEG00000041435	URB1	97	89.002	Mandrillus_leucophaeus
ENSECAG00000013206	URB1	99	43.537	ENSMAMG00000011238	urb1	94	56.548	Mastacembelus_armatus
ENSECAG00000013206	URB1	99	49.661	ENSMZEG00005011862	urb1	95	49.661	Maylandia_zebra
ENSECAG00000013206	URB1	98	67.225	ENSMGAG00000014512	URB1	96	67.225	Meleagris_gallopavo
ENSECAG00000013206	URB1	94	78.248	ENSMAUG00000010516	Urb1	99	78.394	Mesocricetus_auratus
ENSECAG00000013206	URB1	99	89.298	ENSMICG00000016424	URB1	97	89.298	Microcebus_murinus
ENSECAG00000013206	URB1	99	82.434	ENSMOCG00000012613	Urb1	96	82.434	Microtus_ochrogaster
ENSECAG00000013206	URB1	99	71.928	ENSMODG00000021076	URB1	97	72.386	Monodelphis_domestica
ENSECAG00000013206	URB1	96	45.416	ENSMALG00000017411	urb1	97	52.331	Monopterus_albus
ENSECAG00000013206	URB1	99	81.767	MGP_CAROLIEiJ_G0020948	Urb1	97	81.767	Mus_caroli
ENSECAG00000013206	URB1	99	81.540	ENSMUSG00000039929	Urb1	97	81.540	Mus_musculus
ENSECAG00000013206	URB1	99	81.880	MGP_PahariEiJ_G0016653	Urb1	97	81.880	Mus_pahari
ENSECAG00000013206	URB1	99	81.540	MGP_SPRETEiJ_G0021854	Urb1	97	81.540	Mus_spretus
ENSECAG00000013206	URB1	100	87.199	ENSMPUG00000001123	URB1	99	87.199	Mustela_putorius_furo
ENSECAG00000013206	URB1	99	82.893	ENSNGAG00000001905	Urb1	96	82.893	Nannospalax_galili
ENSECAG00000013206	URB1	82	45.323	ENSNBRG00000001049	urb1	99	45.361	Neolamprologus_brichardi
ENSECAG00000013206	URB1	99	88.940	ENSNLEG00000026872	URB1	97	88.851	Nomascus_leucogenys
ENSECAG00000013206	URB1	95	64.138	ENSMEUG00000010828	URB1	96	59.504	Notamacropus_eugenii
ENSECAG00000013206	URB1	99	82.293	ENSOPRG00000013482	URB1	97	82.293	Ochotona_princeps
ENSECAG00000013206	URB1	100	86.149	ENSODEG00000002587	URB1	97	87.271	Octodon_degus
ENSECAG00000013206	URB1	99	55.846	ENSONIG00000005599	urb1	92	55.846	Oreochromis_niloticus
ENSECAG00000013206	URB1	99	88.608	ENSOCUG00000009381	URB1	96	88.608	Oryctolagus_cuniculus
ENSECAG00000013206	URB1	99	55.302	ENSORLG00000003429	urb1	92	55.302	Oryzias_latipes
ENSECAG00000013206	URB1	99	44.080	ENSORLG00020013785	urb1	92	55.852	Oryzias_latipes_hni
ENSECAG00000013206	URB1	99	54.233	ENSORLG00015019421	urb1	99	49.860	Oryzias_latipes_hsok
ENSECAG00000013206	URB1	81	47.576	ENSOMEG00000002094	urb1	97	51.412	Oryzias_melastigma
ENSECAG00000013206	URB1	99	87.968	ENSOGAG00000017140	URB1	97	87.968	Otolemur_garnettii
ENSECAG00000013206	URB1	97	89.091	ENSOARG00000013679	URB1	95	89.091	Ovis_aries
ENSECAG00000013206	URB1	100	89.052	ENSPPAG00000003423	URB1	97	89.229	Pan_paniscus
ENSECAG00000013206	URB1	100	87.746	ENSPPRG00000023131	URB1	99	87.746	Panthera_pardus
ENSECAG00000013206	URB1	92	83.128	ENSPTIG00000016125	URB1	98	83.128	Panthera_tigris_altaica
ENSECAG00000013206	URB1	100	88.826	ENSPTRG00000013852	URB1	97	89.002	Pan_troglodytes
ENSECAG00000013206	URB1	100	89.027	ENSPANG00000021964	URB1	97	89.116	Papio_anubis
ENSECAG00000013206	URB1	99	56.588	ENSPKIG00000003683	urb1	93	56.588	Paramormyrops_kingsleyae
ENSECAG00000013206	URB1	100	83.697	ENSPEMG00000021205	Urb1	96	83.697	Peromyscus_maniculatus_bairdii
ENSECAG00000013206	URB1	76	39.251	ENSPMAG00000009733	URB1	99	34.153	Petromyzon_marinus
ENSECAG00000013206	URB1	99	71.139	ENSPCIG00000016350	URB1	97	71.591	Phascolarctos_cinereus
ENSECAG00000013206	URB1	96	46.359	ENSPLAG00000004371	urb1	92	55.181	Poecilia_latipinna
ENSECAG00000013206	URB1	99	46.898	ENSPMEG00000006634	urb1	92	54.795	Poecilia_mexicana
ENSECAG00000013206	URB1	99	46.877	ENSPREG00000013453	urb1	92	54.224	Poecilia_reticulata
ENSECAG00000013206	URB1	99	88.713	ENSPPYG00000011359	URB1	97	88.889	Pongo_abelii
ENSECAG00000013206	URB1	99	75.858	ENSPCAG00000007430	URB1	93	75.858	Procavia_capensis
ENSECAG00000013206	URB1	99	90.564	ENSPCOG00000022695	URB1	97	89.784	Propithecus_coquereli
ENSECAG00000013206	URB1	99	89.367	ENSPVAG00000000889	URB1	100	83.568	Pteropus_vampyrus
ENSECAG00000013206	URB1	99	43.758	ENSPNYG00000010589	urb1	95	55.172	Pundamilia_nyererei
ENSECAG00000013206	URB1	99	48.741	ENSPNAG00000019324	urb1	92	48.917	Pygocentrus_nattereri
ENSECAG00000013206	URB1	99	81.880	ENSRNOG00000002080	Urb1	97	81.880	Rattus_norvegicus
ENSECAG00000013206	URB1	100	88.688	ENSRBIG00000033122	URB1	97	88.851	Rhinopithecus_bieti
ENSECAG00000013206	URB1	100	88.688	ENSRROG00000040237	URB1	97	88.851	Rhinopithecus_roxellana
ENSECAG00000013206	URB1	100	88.523	ENSSBOG00000027672	URB1	97	88.523	Saimiri_boliviensis_boliviensis
ENSECAG00000013206	URB1	99	71.204	ENSSHAG00000005140	URB1	97	71.655	Sarcophilus_harrisii
ENSECAG00000013206	URB1	92	55.102	ENSSFOG00015000339	urb1	94	55.227	Scleropages_formosus
ENSECAG00000013206	URB1	98	54.214	ENSSMAG00000003782	urb1	95	54.214	Scophthalmus_maximus
ENSECAG00000013206	URB1	99	54.679	ENSSDUG00000012313	urb1	95	54.679	Seriola_dumerili
ENSECAG00000013206	URB1	99	54.340	ENSSLDG00000023179	urb1	95	54.340	Seriola_lalandi_dorsalis
ENSECAG00000013206	URB1	99	65.955	ENSSPUG00000012447	URB1	96	65.955	Sphenodon_punctatus
ENSECAG00000013206	URB1	99	54.638	ENSSPAG00000006325	urb1	95	54.638	Stegastes_partitus
ENSECAG00000013206	URB1	100	87.941	ENSSSCG00000032024	URB1	97	87.941	Sus_scrofa
ENSECAG00000013206	URB1	75	65.251	ENSTGUG00000013442	URB1	96	64.994	Taeniopygia_guttata
ENSECAG00000013206	URB1	99	52.888	ENSTRUG00000009372	urb1	92	52.888	Takifugu_rubripes
ENSECAG00000013206	URB1	98	53.988	ENSTNIG00000016277	urb1	93	53.988	Tetraodon_nigroviridis
ENSECAG00000013206	URB1	83	85.714	ENSTBEG00000010044	URB1	78	85.714	Tupaia_belangeri
ENSECAG00000013206	URB1	90	85.401	ENSTTRG00000007712	URB1	92	82.827	Tursiops_truncatus
ENSECAG00000013206	URB1	100	91.714	ENSUAMG00000012231	URB1	97	91.714	Ursus_americanus
ENSECAG00000013206	URB1	93	92.102	ENSUMAG00000017419	URB1	95	91.367	Ursus_maritimus
ENSECAG00000013206	URB1	73	92.063	ENSVPAG00000001164	URB1	68	93.043	Vicugna_pacos
ENSECAG00000013206	URB1	100	87.939	ENSVVUG00000000551	URB1	99	87.939	Vulpes_vulpes
ENSECAG00000013206	URB1	99	60.426	ENSXETG00000009895	urb1	96	60.426	Xenopus_tropicalis
ENSECAG00000013206	URB1	99	41.282	ENSXCOG00000005500	urb1	98	43.155	Xiphophorus_couchianus
ENSECAG00000013206	URB1	97	43.387	ENSXMAG00000007253	urb1	98	43.340	Xiphophorus_maculatus