EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSECAG00000013326 (Gene tree)
Gene ID: 100063173
Gene Symbol: POC1B
Alias: -
Full Name: POC1 centriolar protein B
Gene Type: protein_coding
Species: Equus_caballus
Status: putative
Strand: Minus strand
Length: 90267 bases
Position: chr28:16530378-16620644
Accession: 49438
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSECAP00000046050	eIF2A	PF08662.11	8.5e-10	1	1
ENSECAP00000011288	eIF2A	PF08662.11	1e-09	1	1
ENSECAP00000037909	eIF2A	PF08662.11	7.8e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSECAT00000062907	-	1386	-	ENSECAP00000037909	461 (aa)	-	-
ENSECAT00000057959	-	1356	-	ENSECAP00000046050	451 (aa)	-	-
ENSECAT00000014152	-	1437	-	ENSECAP00000011288	478 (aa)	XP_023487377	F7AFH8

Gene Model

Click here to download ENSECAG00000013326's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSECAG00000013326's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSECAG00000013326	POC1B	69	30.802	ENSECAG00000007322	PRPF19	54	30.802
ENSECAG00000013326	POC1B	64	30.508	ENSECAG00000006575	WDR3	51	30.508
ENSECAG00000013326	POC1B	63	31.217	ENSECAG00000005595	WDR61	95	37.607
ENSECAG00000013326	POC1B	65	33.333	ENSECAG00000017389	WDR5	94	34.171

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSECAG00000013326	POC1B	100	90.795	ENSG00000139323	POC1B	100	91.209	Homo_sapiens
ENSECAG00000013326	POC1B	97	91.051	ENSAMEG00000001812	POC1B	100	91.051	Ailuropoda_melanoleuca
ENSECAG00000013326	POC1B	100	91.004	ENSANAG00000023816	POC1B	100	91.004	Aotus_nancymaae
ENSECAG00000013326	POC1B	99	92.243	ENSBTAG00000000687	POC1B	99	93.005	Bos_taurus
ENSECAG00000013326	POC1B	100	90.167	ENSCJAG00000019637	POC1B	100	90.167	Callithrix_jacchus
ENSECAG00000013326	POC1B	99	92.389	ENSCAFG00000006105	POC1B	99	92.389	Canis_familiaris
ENSECAG00000013326	POC1B	97	92.431	ENSCAFG00020016403	POC1B	100	92.431	Canis_lupus_dingo
ENSECAG00000013326	POC1B	99	92.243	ENSCHIG00000026402	POC1B	99	92.243	Capra_hircus
ENSECAG00000013326	POC1B	88	81.905	ENSTSYG00000010732	POC1B	91	89.617	Carlito_syrichta
ENSECAG00000013326	POC1B	97	72.477	ENSCAPG00000015652	POC1B	100	72.477	Cavia_aperea
ENSECAG00000013326	POC1B	100	84.100	ENSCPOG00000015525	POC1B	100	84.100	Cavia_porcellus
ENSECAG00000013326	POC1B	100	90.795	ENSCATG00000036201	POC1B	100	90.795	Cercocebus_atys
ENSECAG00000013326	POC1B	97	88.063	ENSCLAG00000006831	POC1B	100	88.063	Chinchilla_lanigera
ENSECAG00000013326	POC1B	100	90.687	ENSCSAG00000003775	POC1B	100	90.687	Chlorocebus_sabaeus
ENSECAG00000013326	POC1B	99	63.122	ENSCPBG00000000137	POC1B	99	63.348	Chrysemys_picta_bellii
ENSECAG00000013326	POC1B	100	90.795	ENSCANG00000043354	POC1B	100	90.795	Colobus_angolensis_palliatus
ENSECAG00000013326	POC1B	97	91.667	ENSDNOG00000011916	POC1B	100	91.667	Dasypus_novemcinctus
ENSECAG00000013326	POC1B	100	87.683	ENSDORG00000013903	Poc1b	100	87.683	Dipodomys_ordii
ENSECAG00000013326	POC1B	100	99.791	ENSEASG00005019319	POC1B	100	99.791	Equus_asinus_asinus
ENSECAG00000013326	POC1B	100	91.632	ENSFCAG00000007623	POC1B	100	91.632	Felis_catus
ENSECAG00000013326	POC1B	97	52.954	ENSFALG00000010636	POC1B	93	53.361	Ficedula_albicollis
ENSECAG00000013326	POC1B	97	88.969	ENSFDAG00000020160	POC1B	100	88.969	Fukomys_damarensis
ENSECAG00000013326	POC1B	78	69.886	ENSGAGG00000013124	POC1B	99	69.101	Gopherus_agassizii
ENSECAG00000013326	POC1B	100	90.586	ENSGGOG00000008572	POC1B	100	90.586	Gorilla_gorilla
ENSECAG00000013326	POC1B	100	88.075	ENSHGLG00000014556	POC1B	100	88.991	Heterocephalus_glaber_female
ENSECAG00000013326	POC1B	97	89.209	ENSHGLG00100000295	POC1B	100	89.209	Heterocephalus_glaber_male
ENSECAG00000013326	POC1B	99	87.104	ENSSTOG00000006306	POC1B	100	87.104	Ictidomys_tridecemlineatus
ENSECAG00000013326	POC1B	100	85.588	ENSJJAG00000013503	Poc1b	100	85.588	Jaculus_jaculus
ENSECAG00000013326	POC1B	98	58.861	ENSLOCG00000016379	POC1B	97	57.895	Lepisosteus_oculatus
ENSECAG00000013326	POC1B	99	89.852	ENSLAFG00000017550	POC1B	100	89.852	Loxodonta_africana
ENSECAG00000013326	POC1B	100	91.004	ENSMFAG00000043490	POC1B	100	91.004	Macaca_fascicularis
ENSECAG00000013326	POC1B	100	91.004	ENSMNEG00000040128	POC1B	100	91.004	Macaca_nemestrina
ENSECAG00000013326	POC1B	100	91.004	ENSMLEG00000031700	POC1B	100	91.004	Mandrillus_leucophaeus
ENSECAG00000013326	POC1B	100	83.592	ENSMOCG00000015822	Poc1b	100	83.592	Microtus_ochrogaster
ENSECAG00000013326	POC1B	99	72.211	ENSMODG00000009882	POC1B	99	72.211	Monodelphis_domestica
ENSECAG00000013326	POC1B	100	80.931	MGP_PahariEiJ_G0031323	Poc1b	100	81.193	Mus_pahari
ENSECAG00000013326	POC1B	100	89.979	ENSMPUG00000007581	POC1B	100	89.979	Mustela_putorius_furo
ENSECAG00000013326	POC1B	97	90.337	ENSMLUG00000002893	POC1B	99	90.337	Myotis_lucifugus
ENSECAG00000013326	POC1B	100	85.356	ENSNGAG00000019321	Poc1b	100	85.356	Nannospalax_galili
ENSECAG00000013326	POC1B	100	90.167	ENSNLEG00000034847	POC1B	100	90.167	Nomascus_leucogenys
ENSECAG00000013326	POC1B	99	87.049	ENSODEG00000009236	POC1B	99	87.049	Octodon_degus
ENSECAG00000013326	POC1B	96	68.119	ENSOANG00000006637	POC1B	99	68.119	Ornithorhynchus_anatinus
ENSECAG00000013326	POC1B	100	91.213	ENSOCUG00000008219	POC1B	100	91.213	Oryctolagus_cuniculus
ENSECAG00000013326	POC1B	99	92.243	ENSOARG00000015648	POC1B	99	92.243	Ovis_aries
ENSECAG00000013326	POC1B	100	90.795	ENSPPAG00000030897	POC1B	100	90.795	Pan_paniscus
ENSECAG00000013326	POC1B	100	91.632	ENSPPRG00000006168	POC1B	100	91.632	Panthera_pardus
ENSECAG00000013326	POC1B	97	91.514	ENSPTIG00000019536	POC1B	100	91.514	Panthera_tigris_altaica
ENSECAG00000013326	POC1B	100	90.795	ENSPTRG00000005284	POC1B	100	90.795	Pan_troglodytes
ENSECAG00000013326	POC1B	100	90.795	ENSPANG00000015875	POC1B	100	90.795	Papio_anubis
ENSECAG00000013326	POC1B	99	62.162	ENSPSIG00000004298	POC1B	99	62.947	Pelodiscus_sinensis
ENSECAG00000013326	POC1B	62	86.585	ENSPCIG00000014731	-	97	74.872	Phascolarctos_cinereus
ENSECAG00000013326	POC1B	100	91.004	ENSPPYG00000004819	POC1B	100	91.004	Pongo_abelii
ENSECAG00000013326	POC1B	100	67.992	ENSPCAG00000002158	POC1B	100	67.992	Procavia_capensis
ENSECAG00000013326	POC1B	100	92.678	ENSPVAG00000011562	POC1B	100	92.678	Pteropus_vampyrus
ENSECAG00000013326	POC1B	99	54.845	ENSPNAG00000026557	POC1B	97	55.052	Pygocentrus_nattereri
ENSECAG00000013326	POC1B	100	88.248	ENSRBIG00000001080	POC1B	100	87.583	Rhinopithecus_bieti
ENSECAG00000013326	POC1B	100	90.586	ENSRROG00000044376	POC1B	100	90.586	Rhinopithecus_roxellana
ENSECAG00000013326	POC1B	100	91.213	ENSSBOG00000023395	POC1B	100	91.213	Saimiri_boliviensis_boliviensis
ENSECAG00000013326	POC1B	100	79.079	ENSSARG00000010807	POC1B	100	79.079	Sorex_araneus
ENSECAG00000013326	POC1B	100	92.259	ENSSSCG00000000920	POC1B	100	92.259	Sus_scrofa
ENSECAG00000013326	POC1B	98	55.202	ENSTGUG00000008063	POC1B	99	54.507	Taeniopygia_guttata
ENSECAG00000013326	POC1B	95	86.406	ENSTBEG00000014216	POC1B	100	86.406	Tupaia_belangeri
ENSECAG00000013326	POC1B	100	92.678	ENSTTRG00000002513	POC1B	100	92.678	Tursiops_truncatus
ENSECAG00000013326	POC1B	100	91.023	ENSUAMG00000006889	POC1B	100	91.023	Ursus_americanus
ENSECAG00000013326	POC1B	97	91.463	ENSUMAG00000002434	POC1B	100	91.463	Ursus_maritimus
ENSECAG00000013326	POC1B	84	91.176	ENSVPAG00000001441	POC1B	84	91.176	Vicugna_pacos
ENSECAG00000013326	POC1B	71	92.784	ENSVVUG00000011627	-	96	92.784	Vulpes_vulpes
ENSECAG00000013326	POC1B	98	59.619	ENSXETG00000021865	poc1b	96	65.934	Xenopus_tropicalis