EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSECAG00000013578 (Gene tree)
Gene ID: 100054238
Gene Symbol: DROSHA
Alias: -
Full Name: drosha ribonuclease III
Gene Type: protein_coding
Species: Equus_caballus
Status: putative
Strand: Plus strand
Length: 116777 bases
Position: chr21:33604109-33720885
Accession: 17318
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSECAP00000027645	Ribonuclease_3	PF00636.26	1.8e-42	1	2
ENSECAP00000027645	Ribonuclease_3	PF00636.26	1.8e-42	2	2
ENSECAP00000029205	Ribonuclease_3	PF00636.26	1.9e-42	1	2
ENSECAP00000029205	Ribonuclease_3	PF00636.26	1.9e-42	2	2
ENSECAP00000029769	Ribonuclease_3	PF00636.26	1.9e-42	1	2
ENSECAP00000029769	Ribonuclease_3	PF00636.26	1.9e-42	2	2
ENSECAP00000012144	Ribonuclease_3	PF00636.26	1.9e-42	1	2
ENSECAP00000012144	Ribonuclease_3	PF00636.26	1.9e-42	2	2
ENSECAP00000012122	Ribonuclease_3	PF00636.26	2e-42	1	2
ENSECAP00000012122	Ribonuclease_3	PF00636.26	2e-42	2	2
ENSECAP00000029205	dsrm	PF00035.26	1.4e-14	1	1
ENSECAP00000029769	dsrm	PF00035.26	1.4e-14	1	1
ENSECAP00000012122	dsrm	PF00035.26	1.5e-14	1	1
ENSECAP00000027645	dsrm	PF00035.26	1.6e-14	1	1
ENSECAP00000012144	dsrm	PF00035.26	1.6e-14	1	1
ENSECAP00000012144	Ribonucleas_3_3	PF14622.6	5.7e-44	1	2
ENSECAP00000012144	Ribonucleas_3_3	PF14622.6	5.7e-44	2	2
ENSECAP00000029205	Ribonucleas_3_3	PF14622.6	5.8e-44	1	2
ENSECAP00000029205	Ribonucleas_3_3	PF14622.6	5.8e-44	2	2
ENSECAP00000027645	Ribonucleas_3_3	PF14622.6	6.3e-44	1	2
ENSECAP00000027645	Ribonucleas_3_3	PF14622.6	6.3e-44	2	2
ENSECAP00000012122	Ribonucleas_3_3	PF14622.6	6.3e-44	1	2
ENSECAP00000012122	Ribonucleas_3_3	PF14622.6	6.3e-44	2	2
ENSECAP00000029769	Ribonucleas_3_3	PF14622.6	7e-44	1	2
ENSECAP00000029769	Ribonucleas_3_3	PF14622.6	7e-44	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSECAT00000015113	-	4236	XM_005604328	ENSECAP00000012122	1411 (aa)	XP_005604385	F7CCV0
ENSECAT00000031172	-	4149	-	ENSECAP00000029205	1382 (aa)	-	-
ENSECAT00000059846	-	4032	-	ENSECAP00000027645	1343 (aa)	-	-
ENSECAT00000015139	-	4125	-	ENSECAP00000012144	1374 (aa)	-	F7C7Z7
ENSECAT00000056273	-	4143	-	ENSECAP00000029769	1380 (aa)	-	-

Gene Model

Click here to download ENSECAG00000013578's gene model file

Pathways

Pathway ID	Pathway Name	Source
ecb03008	Ribosome biogenesis in eukaryotes	KEGG
ecb05205	Proteoglycans in cancer	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSECAG00000013578's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSECAG00000013578	DROSHA	97	99.028	ENSG00000113360	DROSHA	100	99.028	Homo_sapiens
ENSECAG00000013578	DROSHA	97	96.655	ENSAMEG00000006000	DROSHA	100	96.655	Ailuropoda_melanoleuca
ENSECAG00000013578	DROSHA	71	91.167	ENSACIG00000019308	drosha	96	90.316	Amphilophus_citrinellus
ENSECAG00000013578	DROSHA	83	84.137	ENSATEG00000021939	drosha	87	83.405	Anabas_testudineus
ENSECAG00000013578	DROSHA	97	85.662	ENSAPLG00000004372	DROSHA	100	85.953	Anas_platyrhynchos
ENSECAG00000013578	DROSHA	97	82.549	ENSACAG00000007970	DROSHA	99	82.839	Anolis_carolinensis
ENSECAG00000013578	DROSHA	97	96.410	ENSANAG00000020506	DROSHA	100	96.410	Aotus_nancymaae
ENSECAG00000013578	DROSHA	94	75.979	ENSACLG00000012227	drosha	88	80.680	Astatotilapia_calliptera
ENSECAG00000013578	DROSHA	97	77.504	ENSAMXG00000005582	drosha	89	81.287	Astyanax_mexicanus
ENSECAG00000013578	DROSHA	97	98.120	ENSBTAG00000017551	DROSHA	100	98.120	Bos_taurus
ENSECAG00000013578	DROSHA	62	36.493	WBGene00009163	drsh-1	76	36.623	Caenorhabditis_elegans
ENSECAG00000013578	DROSHA	99	98.240	ENSCJAG00000018881	DROSHA	100	98.240	Callithrix_jacchus
ENSECAG00000013578	DROSHA	97	99.229	ENSCAFG00020017559	DROSHA	100	99.229	Canis_lupus_dingo
ENSECAG00000013578	DROSHA	97	98.055	ENSCHIG00000022226	DROSHA	100	98.055	Capra_hircus
ENSECAG00000013578	DROSHA	97	94.272	ENSCPOG00000015051	DROSHA	100	89.753	Cavia_porcellus
ENSECAG00000013578	DROSHA	97	98.728	ENSCCAG00000027283	DROSHA	100	98.728	Cebus_capucinus
ENSECAG00000013578	DROSHA	97	98.803	ENSCATG00000016833	DROSHA	100	98.803	Cercocebus_atys
ENSECAG00000013578	DROSHA	97	98.422	ENSCLAG00000013048	DROSHA	100	98.422	Chinchilla_lanigera
ENSECAG00000013578	DROSHA	100	98.035	ENSCSAG00000017202	DROSHA	99	98.035	Chlorocebus_sabaeus
ENSECAG00000013578	DROSHA	80	93.069	ENSCHOG00000011786	DROSHA	78	93.069	Choloepus_hoffmanni
ENSECAG00000013578	DROSHA	97	89.379	ENSCPBG00000000467	DROSHA	100	89.454	Chrysemys_picta_bellii
ENSECAG00000013578	DROSHA	62	58.014	ENSCSAVG00000010638	-	99	58.852	Ciona_savignyi
ENSECAG00000013578	DROSHA	97	98.683	ENSCANG00000035071	DROSHA	100	98.683	Colobus_angolensis_palliatus
ENSECAG00000013578	DROSHA	97	96.723	ENSCGRG00001008885	Drosha	100	96.723	Cricetulus_griseus_chok1gshd
ENSECAG00000013578	DROSHA	97	96.723	ENSCGRG00000006944	Drosha	100	96.723	Cricetulus_griseus_crigri
ENSECAG00000013578	DROSHA	96	73.167	ENSCSEG00000001452	drosha	88	80.518	Cynoglossus_semilaevis
ENSECAG00000013578	DROSHA	81	83.407	ENSCVAG00000004619	drosha	88	81.833	Cyprinodon_variegatus
ENSECAG00000013578	DROSHA	80	84.335	ENSDARG00000055563	drosha	89	83.261	Danio_rerio
ENSECAG00000013578	DROSHA	97	92.392	ENSDNOG00000001537	DROSHA	99	92.392	Dasypus_novemcinctus
ENSECAG00000013578	DROSHA	97	94.682	ENSDORG00000005624	Drosha	100	94.682	Dipodomys_ordii
ENSECAG00000013578	DROSHA	84	49.530	FBgn0026722	drosha	86	49.533	Drosophila_melanogaster
ENSECAG00000013578	DROSHA	87	96.629	ENSETEG00000007814	DROSHA	86	96.629	Echinops_telfairi
ENSECAG00000013578	DROSHA	51	82.474	ENSEBUG00000005974	-	99	82.474	Eptatretus_burgeri
ENSECAG00000013578	DROSHA	97	99.850	ENSEASG00005007149	DROSHA	100	99.850	Equus_asinus_asinus
ENSECAG00000013578	DROSHA	76	94.025	ENSEEUG00000006351	DROSHA	79	90.556	Erinaceus_europaeus
ENSECAG00000013578	DROSHA	92	72.214	ENSELUG00000015039	drosha	82	78.010	Esox_lucius
ENSECAG00000013578	DROSHA	97	99.327	ENSFCAG00000000360	DROSHA	100	99.327	Felis_catus
ENSECAG00000013578	DROSHA	96	85.979	ENSFALG00000012843	DROSHA	100	85.735	Ficedula_albicollis
ENSECAG00000013578	DROSHA	97	98.134	ENSFDAG00000018414	DROSHA	100	98.134	Fukomys_damarensis
ENSECAG00000013578	DROSHA	85	64.583	ENSFHEG00000003840	drosha	82	68.893	Fundulus_heteroclitus
ENSECAG00000013578	DROSHA	97	88.249	ENSGALG00000012916	DROSHA	100	88.249	Gallus_gallus
ENSECAG00000013578	DROSHA	81	84.014	ENSGAFG00000016853	drosha	89	82.025	Gambusia_affinis
ENSECAG00000013578	DROSHA	97	89.304	ENSGAGG00000005621	DROSHA	100	89.304	Gopherus_agassizii
ENSECAG00000013578	DROSHA	97	99.028	ENSGGOG00000011006	DROSHA	100	99.028	Gorilla_gorilla
ENSECAG00000013578	DROSHA	91	72.384	ENSHBUG00000015907	drosha	87	78.571	Haplochromis_burtoni
ENSECAG00000013578	DROSHA	98	97.635	ENSHGLG00000018873	DROSHA	99	97.635	Heterocephalus_glaber_female
ENSECAG00000013578	DROSHA	99	97.436	ENSHGLG00100015793	DROSHA	100	97.436	Heterocephalus_glaber_male
ENSECAG00000013578	DROSHA	83	81.881	ENSHCOG00000008454	drosha	99	80.504	Hippocampus_comes
ENSECAG00000013578	DROSHA	82	82.467	ENSIPUG00000021202	drosha	90	79.357	Ictalurus_punctatus
ENSECAG00000013578	DROSHA	77	97.872	ENSSTOG00000016323	DROSHA	100	99.815	Ictidomys_tridecemlineatus
ENSECAG00000013578	DROSHA	97	97.366	ENSJJAG00000019758	Drosha	100	97.232	Jaculus_jaculus
ENSECAG00000013578	DROSHA	96	83.104	ENSLBEG00000006606	drosha	87	82.236	Labrus_bergylta
ENSECAG00000013578	DROSHA	97	82.130	ENSLACG00000005937	DROSHA	87	86.233	Latimeria_chalumnae
ENSECAG00000013578	DROSHA	97	77.865	ENSLOCG00000012852	drosha	88	82.081	Lepisosteus_oculatus
ENSECAG00000013578	DROSHA	97	96.861	ENSLAFG00000013831	DROSHA	100	96.861	Loxodonta_africana
ENSECAG00000013578	DROSHA	100	98.213	ENSMFAG00000003055	DROSHA	100	98.617	Macaca_fascicularis
ENSECAG00000013578	DROSHA	97	98.803	ENSMMUG00000012193	DROSHA	100	98.803	Macaca_mulatta
ENSECAG00000013578	DROSHA	100	98.064	ENSMNEG00000037529	DROSHA	100	98.399	Macaca_nemestrina
ENSECAG00000013578	DROSHA	97	93.647	ENSMLEG00000024167	DROSHA	100	93.647	Mandrillus_leucophaeus
ENSECAG00000013578	DROSHA	84	82.164	ENSMAMG00000012613	drosha	96	89.602	Mastacembelus_armatus
ENSECAG00000013578	DROSHA	94	75.979	ENSMZEG00005019487	drosha	88	80.680	Maylandia_zebra
ENSECAG00000013578	DROSHA	97	88.099	ENSMGAG00000005087	DROSHA	100	88.099	Meleagris_gallopavo
ENSECAG00000013578	DROSHA	97	96.635	ENSMAUG00000002863	Drosha	100	96.577	Mesocricetus_auratus
ENSECAG00000013578	DROSHA	97	96.500	ENSMICG00000002241	DROSHA	100	98.182	Microcebus_murinus
ENSECAG00000013578	DROSHA	97	96.559	ENSMOCG00000015044	Drosha	100	96.559	Microtus_ochrogaster
ENSECAG00000013578	DROSHA	72	86.907	ENSMMOG00000004016	drosha	96	86.544	Mola_mola
ENSECAG00000013578	DROSHA	97	87.049	ENSMODG00000004807	DROSHA	99	87.491	Monodelphis_domestica
ENSECAG00000013578	DROSHA	97	75.311	ENSMALG00000010542	drosha	88	81.925	Monopterus_albus
ENSECAG00000013578	DROSHA	97	95.779	MGP_CAROLIEiJ_G0019687	Drosha	100	95.779	Mus_caroli
ENSECAG00000013578	DROSHA	97	95.779	ENSMUSG00000022191	Drosha	100	95.779	Mus_musculus
ENSECAG00000013578	DROSHA	97	95.924	MGP_PahariEiJ_G0016063	Drosha	100	95.924	Mus_pahari
ENSECAG00000013578	DROSHA	97	95.269	MGP_SPRETEiJ_G0020580	Drosha	100	95.269	Mus_spretus
ENSECAG00000013578	DROSHA	97	98.908	ENSMPUG00000015237	DROSHA	100	98.908	Mustela_putorius_furo
ENSECAG00000013578	DROSHA	97	95.283	ENSMLUG00000002581	DROSHA	100	95.283	Myotis_lucifugus
ENSECAG00000013578	DROSHA	97	88.784	ENSNGAG00000017329	Drosha	100	91.187	Nannospalax_galili
ENSECAG00000013578	DROSHA	71	73.597	ENSNBRG00000001870	drosha	96	72.756	Neolamprologus_brichardi
ENSECAG00000013578	DROSHA	97	94.978	ENSNLEG00000013963	DROSHA	100	97.350	Nomascus_leucogenys
ENSECAG00000013578	DROSHA	80	79.134	ENSMEUG00000002029	DROSHA	82	79.134	Notamacropus_eugenii
ENSECAG00000013578	DROSHA	88	96.552	ENSOPRG00000010845	DROSHA	91	96.552	Ochotona_princeps
ENSECAG00000013578	DROSHA	97	97.820	ENSODEG00000001911	DROSHA	100	97.820	Octodon_degus
ENSECAG00000013578	DROSHA	96	75.421	ENSONIG00000006578	drosha	88	80.898	Oreochromis_niloticus
ENSECAG00000013578	DROSHA	57	80.616	ENSOANG00000015744	-	100	80.616	Ornithorhynchus_anatinus
ENSECAG00000013578	DROSHA	99	96.253	ENSOCUG00000000367	DROSHA	99	96.253	Oryctolagus_cuniculus
ENSECAG00000013578	DROSHA	97	74.848	ENSORLG00000013592	drosha	89	80.237	Oryzias_latipes
ENSECAG00000013578	DROSHA	73	88.008	ENSORLG00020002854	drosha	95	88.969	Oryzias_latipes_hni
ENSECAG00000013578	DROSHA	73	88.889	ENSORLG00015003156	drosha	95	90.000	Oryzias_latipes_hsok
ENSECAG00000013578	DROSHA	84	80.494	ENSOMEG00000001062	drosha	89	80.659	Oryzias_melastigma
ENSECAG00000013578	DROSHA	87	94.481	ENSOGAG00000005424	DROSHA	100	94.481	Otolemur_garnettii
ENSECAG00000013578	DROSHA	97	96.852	ENSPPAG00000037526	DROSHA	99	99.119	Pan_paniscus
ENSECAG00000013578	DROSHA	97	99.327	ENSPPRG00000002687	DROSHA	100	99.327	Panthera_pardus
ENSECAG00000013578	DROSHA	97	99.327	ENSPTIG00000017523	DROSHA	100	99.327	Panthera_tigris_altaica
ENSECAG00000013578	DROSHA	97	99.081	ENSPTRG00000016762	DROSHA	100	99.081	Pan_troglodytes
ENSECAG00000013578	DROSHA	100	98.213	ENSPANG00000003027	DROSHA	99	98.213	Papio_anubis
ENSECAG00000013578	DROSHA	97	78.465	ENSPKIG00000011514	drosha	89	82.773	Paramormyrops_kingsleyae
ENSECAG00000013578	DROSHA	97	95.997	ENSPEMG00000000607	Drosha	100	95.997	Peromyscus_maniculatus_bairdii
ENSECAG00000013578	DROSHA	97	88.682	ENSPCIG00000006010	DROSHA	99	88.757	Phascolarctos_cinereus
ENSECAG00000013578	DROSHA	80	85.064	ENSPREG00000022302	drosha	89	83.723	Poecilia_reticulata
ENSECAG00000013578	DROSHA	97	98.690	ENSPPYG00000015370	DROSHA	100	98.690	Pongo_abelii
ENSECAG00000013578	DROSHA	97	83.176	ENSPCAG00000007190	DROSHA	100	83.103	Procavia_capensis
ENSECAG00000013578	DROSHA	97	95.737	ENSPCOG00000028511	DROSHA	100	98.182	Propithecus_coquereli
ENSECAG00000013578	DROSHA	97	94.975	ENSPVAG00000013167	DROSHA	100	94.975	Pteropus_vampyrus
ENSECAG00000013578	DROSHA	94	75.828	ENSPNYG00000000398	drosha	95	89.117	Pundamilia_nyererei
ENSECAG00000013578	DROSHA	78	92.236	ENSPNAG00000011876	drosha	86	88.042	Pygocentrus_nattereri
ENSECAG00000013578	DROSHA	97	96.215	ENSRNOG00000013451	Drosha	100	96.215	Rattus_norvegicus
ENSECAG00000013578	DROSHA	97	97.459	ENSRBIG00000032786	DROSHA	100	97.459	Rhinopithecus_bieti
ENSECAG00000013578	DROSHA	99	98.497	ENSRROG00000028199	DROSHA	100	98.690	Rhinopithecus_roxellana
ENSECAG00000013578	DROSHA	97	98.545	ENSSBOG00000024008	DROSHA	100	98.545	Saimiri_boliviensis_boliviensis
ENSECAG00000013578	DROSHA	97	86.976	ENSSHAG00000015198	DROSHA	94	96.418	Sarcophilus_harrisii
ENSECAG00000013578	DROSHA	88	80.360	ENSSFOG00015009776	drosha	92	81.748	Scleropages_formosus
ENSECAG00000013578	DROSHA	96	74.432	ENSSMAG00000008069	drosha	88	79.851	Scophthalmus_maximus
ENSECAG00000013578	DROSHA	84	81.941	ENSSDUG00000010944	drosha	96	90.928	Seriola_dumerili
ENSECAG00000013578	DROSHA	84	82.079	ENSSLDG00000025271	drosha	96	90.826	Seriola_lalandi_dorsalis
ENSECAG00000013578	DROSHA	70	85.294	ENSSARG00000004436	-	68	89.706	Sorex_araneus
ENSECAG00000013578	DROSHA	97	83.619	ENSSPUG00000006902	DROSHA	100	83.619	Sphenodon_punctatus
ENSECAG00000013578	DROSHA	97	98.728	ENSSSCG00000016809	DROSHA	100	98.755	Sus_scrofa
ENSECAG00000013578	DROSHA	96	85.463	ENSTGUG00000001955	DROSHA	100	85.153	Taeniopygia_guttata
ENSECAG00000013578	DROSHA	90	73.882	ENSTRUG00000017778	drosha	85	79.159	Takifugu_rubripes
ENSECAG00000013578	DROSHA	97	73.024	ENSTNIG00000008688	drosha	95	90.452	Tetraodon_nigroviridis
ENSECAG00000013578	DROSHA	91	93.835	ENSTBEG00000000537	DROSHA	95	93.835	Tupaia_belangeri
ENSECAG00000013578	DROSHA	97	97.597	ENSTTRG00000004210	DROSHA	100	97.597	Tursiops_truncatus
ENSECAG00000013578	DROSHA	97	99.252	ENSUAMG00000025257	DROSHA	100	99.252	Ursus_americanus
ENSECAG00000013578	DROSHA	97	94.804	ENSUMAG00000014097	DROSHA	100	99.321	Ursus_maritimus
ENSECAG00000013578	DROSHA	78	93.128	ENSVPAG00000011260	DROSHA	100	93.128	Vicugna_pacos
ENSECAG00000013578	DROSHA	97	99.402	ENSVVUG00000022212	DROSHA	100	99.402	Vulpes_vulpes
ENSECAG00000013578	DROSHA	90	77.462	ENSXETG00000016701	drosha	88	79.933	Xenopus_tropicalis