EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSECAG00000013618 (Gene tree)
Gene ID: 100062505
Gene Symbol: GTSF1
Alias: -
Full Name: gametocyte specific factor 1
Gene Type: protein_coding
Species: Equus_caballus
Status: putative
Strand: Minus strand
Length: 14672 bases
Position: chr6:72150362-72165033
Accession: 56558
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSECAP00000011389	zf-U11-48K	PF05253.12	1.6e-19	1	2
ENSECAP00000011389	zf-U11-48K	PF05253.12	1.6e-19	2	2
ENSECAP00000035548	zf-U11-48K	PF05253.12	1e-18	1	2
ENSECAP00000035548	zf-U11-48K	PF05253.12	1e-18	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSECAT00000031167	-	765	-	ENSECAP00000035548	199 (aa)	XP_005611318	UPI0003ACD382
ENSECAT00000014262	-	729	-	ENSECAP00000011389	167 (aa)	-	F6ZMC3

Gene Model

Click here to download ENSECAG00000013618's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSECAG00000013618's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSECAG00000013618	GTSF1	62	31.731	ENSECAG00000014413	-	95	31.731

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSECAG00000013618	GTSF1	100	92.814	ENSG00000170627	GTSF1	100	92.814	Homo_sapiens
ENSECAG00000013618	GTSF1	88	45.638	ENSAPOG00000022724	-	95	45.638	Acanthochromis_polyacanthus
ENSECAG00000013618	GTSF1	97	98.148	ENSAMEG00000000939	GTSF1	96	98.148	Ailuropoda_melanoleuca
ENSECAG00000013618	GTSF1	88	43.624	ENSAOCG00000022214	-	72	42.038	Amphiprion_ocellaris
ENSECAG00000013618	GTSF1	75	62.698	ENSAPLG00000004814	GTSF1	93	62.698	Anas_platyrhynchos
ENSECAG00000013618	GTSF1	97	62.346	ENSACAG00000014260	-	95	61.963	Anolis_carolinensis
ENSECAG00000013618	GTSF1	69	50.000	ENSACAG00000029590	-	95	50.000	Anolis_carolinensis
ENSECAG00000013618	GTSF1	100	91.617	ENSANAG00000024529	GTSF1	100	91.617	Aotus_nancymaae
ENSECAG00000013618	GTSF1	100	95.808	ENSBTAG00000018085	GTSF1	100	95.808	Bos_taurus
ENSECAG00000013618	GTSF1	100	92.814	ENSCJAG00000018968	-	100	92.814	Callithrix_jacchus
ENSECAG00000013618	GTSF1	100	87.425	ENSCJAG00000039915	-	88	87.425	Callithrix_jacchus
ENSECAG00000013618	GTSF1	100	97.605	ENSCAFG00000006465	-	100	97.605	Canis_familiaris
ENSECAG00000013618	GTSF1	100	97.605	ENSCAFG00020020373	-	94	96.951	Canis_lupus_dingo
ENSECAG00000013618	GTSF1	99	93.529	ENSCHIG00000012215	-	99	93.529	Capra_hircus
ENSECAG00000013618	GTSF1	99	93.976	ENSTSYG00000004679	-	100	93.976	Carlito_syrichta
ENSECAG00000013618	GTSF1	100	76.048	ENSTSYG00000035266	-	100	76.048	Carlito_syrichta
ENSECAG00000013618	GTSF1	100	95.808	ENSCPOG00000008743	GTSF1	100	95.808	Cavia_porcellus
ENSECAG00000013618	GTSF1	96	68.323	ENSCCAG00000032808	GTSF1	100	68.323	Cebus_capucinus
ENSECAG00000013618	GTSF1	100	92.814	ENSCATG00000036328	GTSF1	100	92.814	Cercocebus_atys
ENSECAG00000013618	GTSF1	100	95.210	ENSCLAG00000012811	GTSF1	100	95.210	Chinchilla_lanigera
ENSECAG00000013618	GTSF1	94	92.994	ENSCSAG00000005394	GTSF1	99	92.994	Chlorocebus_sabaeus
ENSECAG00000013618	GTSF1	100	95.808	ENSCHOG00000001659	GTSF1	100	95.808	Choloepus_hoffmanni
ENSECAG00000013618	GTSF1	99	69.880	ENSCPBG00000005134	-	71	70.909	Chrysemys_picta_bellii
ENSECAG00000013618	GTSF1	99	59.880	ENSCPBG00000024905	-	90	59.880	Chrysemys_picta_bellii
ENSECAG00000013618	GTSF1	100	91.617	ENSCANG00000033118	GTSF1	100	91.617	Colobus_angolensis_palliatus
ENSECAG00000013618	GTSF1	100	86.228	ENSCANG00000031776	-	100	86.228	Colobus_angolensis_palliatus
ENSECAG00000013618	GTSF1	100	97.006	ENSCGRG00001013814	Gtsf1	100	97.006	Cricetulus_griseus_chok1gshd
ENSECAG00000013618	GTSF1	100	97.006	ENSCGRG00000007733	Gtsf1	100	97.006	Cricetulus_griseus_crigri
ENSECAG00000013618	GTSF1	94	95.541	ENSDNOG00000001438	-	90	95.541	Dasypus_novemcinctus
ENSECAG00000013618	GTSF1	100	97.006	ENSDORG00000003228	Gtsf1	100	97.006	Dipodomys_ordii
ENSECAG00000013618	GTSF1	100	94.012	ENSETEG00000009310	GTSF1	100	94.012	Echinops_telfairi
ENSECAG00000013618	GTSF1	100	100.000	ENSEASG00005010260	GTSF1	90	100.000	Equus_asinus_asinus
ENSECAG00000013618	GTSF1	100	97.605	ENSEEUG00000005185	GTSF1	100	97.605	Erinaceus_europaeus
ENSECAG00000013618	GTSF1	100	97.605	ENSFCAG00000010156	-	100	97.605	Felis_catus
ENSECAG00000013618	GTSF1	100	68.263	ENSFCAG00000023672	-	90	68.263	Felis_catus
ENSECAG00000013618	GTSF1	75	54.762	ENSFALG00000007613	-	100	54.762	Ficedula_albicollis
ENSECAG00000013618	GTSF1	100	91.018	ENSFDAG00000009383	GTSF1	100	91.018	Fukomys_damarensis
ENSECAG00000013618	GTSF1	92	57.143	ENSGALG00000001109	GTSF1	97	56.688	Gallus_gallus
ENSECAG00000013618	GTSF1	88	49.660	ENSGACG00000010783	-	80	49.660	Gasterosteus_aculeatus
ENSECAG00000013618	GTSF1	66	45.946	ENSGAGG00000018216	-	89	45.946	Gopherus_agassizii
ENSECAG00000013618	GTSF1	62	52.830	ENSGAGG00000016342	-	99	52.830	Gopherus_agassizii
ENSECAG00000013618	GTSF1	99	61.677	ENSGAGG00000011062	GTSF1	86	61.677	Gopherus_agassizii
ENSECAG00000013618	GTSF1	100	92.814	ENSGGOG00000016063	GTSF1	100	92.814	Gorilla_gorilla
ENSECAG00000013618	GTSF1	100	94.012	ENSHGLG00000002436	GTSF1	100	94.012	Heterocephalus_glaber_female
ENSECAG00000013618	GTSF1	100	94.012	ENSHGLG00100017301	GTSF1	100	94.012	Heterocephalus_glaber_male
ENSECAG00000013618	GTSF1	93	47.134	ENSIPUG00000002483	-	82	47.403	Ictalurus_punctatus
ENSECAG00000013618	GTSF1	100	97.605	ENSSTOG00000025170	GTSF1	100	97.605	Ictidomys_tridecemlineatus
ENSECAG00000013618	GTSF1	100	86.228	ENSJJAG00000017442	-	100	86.228	Jaculus_jaculus
ENSECAG00000013618	GTSF1	100	92.216	ENSJJAG00000003323	-	100	92.216	Jaculus_jaculus
ENSECAG00000013618	GTSF1	88	48.980	ENSKMAG00000006038	-	80	48.980	Kryptolebias_marmoratus
ENSECAG00000013618	GTSF1	95	60.759	ENSLACG00000008870	GTSF1	82	60.759	Latimeria_chalumnae
ENSECAG00000013618	GTSF1	97	98.148	ENSLAFG00000016318	GTSF1	97	98.148	Loxodonta_africana
ENSECAG00000013618	GTSF1	100	92.814	ENSMFAG00000041178	GTSF1	100	92.814	Macaca_fascicularis
ENSECAG00000013618	GTSF1	100	92.814	ENSMMUG00000003758	GTSF1	100	92.814	Macaca_mulatta
ENSECAG00000013618	GTSF1	100	92.814	ENSMNEG00000036779	GTSF1	100	92.814	Macaca_nemestrina
ENSECAG00000013618	GTSF1	100	92.216	ENSMLEG00000028375	GTSF1	100	92.216	Mandrillus_leucophaeus
ENSECAG00000013618	GTSF1	77	59.231	ENSMGAG00000000685	GTSF1	92	59.231	Meleagris_gallopavo
ENSECAG00000013618	GTSF1	100	72.455	ENSMAUG00000018746	Gtsf1	99	72.455	Mesocricetus_auratus
ENSECAG00000013618	GTSF1	100	97.605	ENSMICG00000008444	-	100	97.605	Microcebus_murinus
ENSECAG00000013618	GTSF1	100	96.407	ENSMOCG00000018889	Gtsf1	100	96.407	Microtus_ochrogaster
ENSECAG00000013618	GTSF1	100	86.228	ENSMODG00000019422	GTSF1	100	86.228	Monodelphis_domestica
ENSECAG00000013618	GTSF1	100	96.407	MGP_CAROLIEiJ_G0020379	Gtsf1	100	96.407	Mus_caroli
ENSECAG00000013618	GTSF1	100	96.407	ENSMUSG00000022487	Gtsf1	100	96.407	Mus_musculus
ENSECAG00000013618	GTSF1	100	95.808	MGP_PahariEiJ_G0020378	Gtsf1	100	95.808	Mus_pahari
ENSECAG00000013618	GTSF1	100	96.407	MGP_SPRETEiJ_G0021272	Gtsf1	100	96.407	Mus_spretus
ENSECAG00000013618	GTSF1	98	98.171	ENSMPUG00000005669	-	98	98.171	Mustela_putorius_furo
ENSECAG00000013618	GTSF1	100	88.024	ENSMPUG00000019140	-	100	88.024	Mustela_putorius_furo
ENSECAG00000013618	GTSF1	100	96.407	ENSMPUG00000019323	-	100	96.407	Mustela_putorius_furo
ENSECAG00000013618	GTSF1	100	95.808	ENSMLUG00000012961	-	100	95.808	Myotis_lucifugus
ENSECAG00000013618	GTSF1	100	92.814	ENSMLUG00000026557	-	100	92.814	Myotis_lucifugus
ENSECAG00000013618	GTSF1	100	95.808	ENSNGAG00000014213	Gtsf1	100	95.808	Nannospalax_galili
ENSECAG00000013618	GTSF1	100	92.216	ENSNLEG00000017635	GTSF1	100	92.216	Nomascus_leucogenys
ENSECAG00000013618	GTSF1	100	76.048	ENSMEUG00000016206	GTSF1	100	76.048	Notamacropus_eugenii
ENSECAG00000013618	GTSF1	100	68.862	ENSOPRG00000017277	GTSF1	100	68.862	Ochotona_princeps
ENSECAG00000013618	GTSF1	100	95.808	ENSODEG00000014220	GTSF1	100	95.808	Octodon_degus
ENSECAG00000013618	GTSF1	98	67.879	ENSOANG00000011386	GTSF1	99	67.879	Ornithorhynchus_anatinus
ENSECAG00000013618	GTSF1	100	95.808	ENSOCUG00000024495	GTSF1	100	95.808	Oryctolagus_cuniculus
ENSECAG00000013618	GTSF1	68	50.442	ENSORLG00015005017	-	71	50.000	Oryzias_latipes_hsok
ENSECAG00000013618	GTSF1	95	95.597	ENSOGAG00000017227	GTSF1	94	95.597	Otolemur_garnettii
ENSECAG00000013618	GTSF1	100	96.407	ENSOARG00000016162	GTSF1	100	96.407	Ovis_aries
ENSECAG00000013618	GTSF1	100	92.814	ENSPPAG00000028506	GTSF1	100	92.814	Pan_paniscus
ENSECAG00000013618	GTSF1	100	97.605	ENSPPRG00000004344	-	100	97.605	Panthera_pardus
ENSECAG00000013618	GTSF1	100	87.425	ENSPPRG00000017612	-	91	87.425	Panthera_pardus
ENSECAG00000013618	GTSF1	100	88.024	ENSPTIG00000010868	-	91	88.024	Panthera_tigris_altaica
ENSECAG00000013618	GTSF1	100	97.605	ENSPTIG00000020415	-	100	97.605	Panthera_tigris_altaica
ENSECAG00000013618	GTSF1	100	92.814	ENSPTRG00000005041	GTSF1	100	92.814	Pan_troglodytes
ENSECAG00000013618	GTSF1	100	92.814	ENSPANG00000020579	GTSF1	100	92.814	Papio_anubis
ENSECAG00000013618	GTSF1	83	44.966	ENSPSIG00000009839	-	93	44.966	Pelodiscus_sinensis
ENSECAG00000013618	GTSF1	98	67.879	ENSPSIG00000009968	GTSF1	81	68.485	Pelodiscus_sinensis
ENSECAG00000013618	GTSF1	100	97.006	ENSPEMG00000009595	Gtsf1	100	97.006	Peromyscus_maniculatus_bairdii
ENSECAG00000013618	GTSF1	100	82.036	ENSPCIG00000006731	GTSF1	100	82.036	Phascolarctos_cinereus
ENSECAG00000013618	GTSF1	100	92.814	ENSPPYG00000004605	GTSF1	100	92.814	Pongo_abelii
ENSECAG00000013618	GTSF1	100	97.006	ENSPCOG00000016907	-	100	97.006	Propithecus_coquereli
ENSECAG00000013618	GTSF1	99	83.735	ENSPCOG00000015201	-	99	82.099	Propithecus_coquereli
ENSECAG00000013618	GTSF1	100	97.605	ENSPVAG00000000333	GTSF1	100	97.605	Pteropus_vampyrus
ENSECAG00000013618	GTSF1	90	47.712	ENSPNAG00000005737	-	82	47.712	Pygocentrus_nattereri
ENSECAG00000013618	GTSF1	100	96.407	ENSRNOG00000036831	Gtsf1	88	96.407	Rattus_norvegicus
ENSECAG00000013618	GTSF1	100	85.629	ENSRBIG00000039916	-	89	85.629	Rhinopithecus_bieti
ENSECAG00000013618	GTSF1	100	92.216	ENSRBIG00000043438	-	100	92.216	Rhinopithecus_bieti
ENSECAG00000013618	GTSF1	100	92.814	ENSRROG00000008137	GTSF1	100	92.814	Rhinopithecus_roxellana
ENSECAG00000013618	GTSF1	100	93.413	ENSSBOG00000029460	GTSF1	100	93.413	Saimiri_boliviensis_boliviensis
ENSECAG00000013618	GTSF1	100	86.228	ENSSHAG00000011633	GTSF1	100	86.228	Sarcophilus_harrisii
ENSECAG00000013618	GTSF1	78	96.923	ENSSARG00000004928	GTSF1	78	96.923	Sorex_araneus
ENSECAG00000013618	GTSF1	98	50.307	ENSSPUG00000010064	GTSF1	93	70.000	Sphenodon_punctatus
ENSECAG00000013618	GTSF1	100	97.006	ENSSSCG00000026333	GTSF1	100	97.006	Sus_scrofa
ENSECAG00000013618	GTSF1	76	57.031	ENSTGUG00000002008	-	100	57.031	Taeniopygia_guttata
ENSECAG00000013618	GTSF1	96	95.652	ENSTBEG00000006154	GTSF1	100	95.652	Tupaia_belangeri
ENSECAG00000013618	GTSF1	100	94.611	ENSTTRG00000004470	GTSF1	100	94.611	Tursiops_truncatus
ENSECAG00000013618	GTSF1	100	98.204	ENSUAMG00000021669	GTSF1	94	97.561	Ursus_americanus
ENSECAG00000013618	GTSF1	100	98.204	ENSUMAG00000011279	GTSF1	100	98.204	Ursus_maritimus
ENSECAG00000013618	GTSF1	100	95.808	ENSVPAG00000007016	GTSF1	100	95.808	Vicugna_pacos
ENSECAG00000013618	GTSF1	100	97.605	ENSVVUG00000023687	-	84	97.605	Vulpes_vulpes
ENSECAG00000013618	GTSF1	96	63.975	ENSXETG00000033546	gtsf1	73	62.424	Xenopus_tropicalis